RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 LARP6Q9BRS8 491 aaKnown RBP8.52□□□□□ -1.05
RNU4-1-201ENST00000363925 POTEB2H3BUK9 544 aa8.51□□□□□ -1.05
RNU4-1-201ENST00000363925 MAMSTRQ6ZN01 415 aa8.5□□□□□ -1.05
RNU4-1-201ENST00000363925 TMEM121BQ9BXQ6 578 aaPredicted RBP8.49□□□□□ -1.05
RNU4-1-201ENST00000363925 LHX8Q68G74 356 aa8.48□□□□□ -1.05
RNU4-1-201ENST00000363925 C2orf72A6NCS6 295 aa8.47□□□□□ -1.05
RNU4-1-201ENST00000363925 SLAIN1Q8ND83 568 aa8.47□□□□□ -1.05
RNU4-1-201ENST00000363925 DDX27Q96GQ7 796 aaKnown RBP8.47□□□□□ -1.05
RNU4-1-201ENST00000363925 KDM2AQ9Y2K7 1162 aa8.47□□□□□ -1.05
RNU4-1-201ENST00000363925 POTEJP0CG39 1038 aa8.46□□□□□ -1.06
RNU4-1-201ENST00000363925 NCKAP5LQ9HCH0 1330 aa8.46□□□□□ -1.06
RNU4-1-201ENST00000363925 PPP1R15BQ5SWA1 713 aa8.44□□□□□ -1.06
RNU4-1-201ENST00000363925 TMEM92Q6UXU6 159 aa8.44□□□□□ -1.06
RNU4-1-201ENST00000363925 CRISPLD2Q9H0B8 497 aa8.44□□□□□ -1.06
RNU4-1-201ENST00000363925 GPHNQ9NQX3 736 aaPredicted RBP8.44□□□□□ -1.06
RNU4-1-201ENST00000363925 DSG2Q14126 1118 aa8.42□□□□□ -1.06
RNU4-1-201ENST00000363925 PLPP6Q8IY26 295 aa8.42□□□□□ -1.06
RNU4-1-201ENST00000363925 E2F4Q16254 413 aa8.39□□□□□ -1.07
RNU4-1-201ENST00000363925 FOXK1P85037 733 aa8.38□□□□□ -1.07
RNU4-1-201ENST00000363925 MFSD10Q14728 455 aa8.38□□□□□ -1.07
RNU4-1-201ENST00000363925 UPF1Q92900 1129 aaKnown RBP eCLIP8.38□□□□□ -1.07
RNU4-1-201ENST00000363925 OTUD5Q96G74 571 aa8.37□□□□□ -1.07
RNU4-1-201ENST00000363925 KIF3CO14782 793 aa8.36□□□□□ -1.07
RNU4-1-201ENST00000363925 P3H3Q8IVL6 736 aa8.36□□□□□ -1.07
RNU4-1-201ENST00000363925 ZNF710Q8N1W2 664 aa8.34□□□□□ -1.07
RNU4-1-201ENST00000363925 MAP3K9P80192 1104 aa8.33□□□□□ -1.08
RNU4-1-201ENST00000363925 KCNV2Q8TDN2 545 aa8.33□□□□□ -1.08
RNU4-1-201ENST00000363925 SNPHO15079 494 aa8.32□□□□□ -1.08
RNU4-1-201ENST00000363925 NBR1Q14596 966 aa8.32□□□□□ -1.08
RNU4-1-201ENST00000363925 DOK7Q18PE1 504 aa8.32□□□□□ -1.08
RNU4-1-201ENST00000363925 RIMBP2O15034 1052 aa8.31□□□□□ -1.08
RNU4-1-201ENST00000363925 DPYSL4O14531 572 aa8.3□□□□□ -1.08
RNU4-1-201ENST00000363925 TBC1D12O60347 775 aa8.3□□□□□ -1.08
RNU4-1-201ENST00000363925 EMILIN3Q9NT22 766 aa8.29□□□□□ -1.08
RNU4-1-201ENST00000363925 ZNF316A6NFI3 1004 aaPredicted RBP8.28□□□□□ -1.08
RNU4-1-201ENST00000363925 CAMK2BQ13554 666 aa8.27□□□□□ -1.09
RNU4-1-201ENST00000363925 ARHGEF1Q92888 912 aaKnown RBP8.27□□□□□ -1.09
RNU4-1-201ENST00000363925 FAM163AQ96GL9 167 aaPredicted RBP8.26□□□□□ -1.09
RNU4-1-201ENST00000363925 PCDHGA4Q9Y5G9 962 aa8.26□□□□□ -1.09
RNU4-1-201ENST00000363925 ARSIQ5FYB1 569 aa8.25□□□□□ -1.09
RNU4-1-201ENST00000363925 HOXB3P14651 431 aaPredicted RBP8.24□□□□□ -1.09
RNU4-1-201ENST00000363925 OXER1Q8TDS5 423 aa8.23□□□□□ -1.09
RNU4-1-201ENST00000363925 KHSRPQ92945 711 aaKnown RBP eCLIP8.23□□□□□ -1.09
RNU4-1-201ENST00000363925 BCANQ96GW7 911 aa8.23□□□□□ -1.09
RNU4-1-201ENST00000363925 EVI5O60447 810 aa8.22□□□□□ -1.09
RNU4-1-201ENST00000363925 SLC34A2O95436 690 aa8.22□□□□□ -1.09
RNU4-1-201ENST00000363925 NUDT7P0C024 238 aa8.22□□□□□ -1.09
RNU4-1-201ENST00000363925 PTCD2Q8WV60 388 aaKnown RBP8.22□□□□□ -1.09
RNU4-1-201ENST00000363925 SPDYE16A6NNV3 312 aaPredicted RBP8.2□□□□□ -1.1
RNU4-1-201ENST00000363925 GRXCR2A6NFK2 248 aa8.19□□□□□ -1.1
RNU4-1-201ENST00000363925 TULP1O00294 542 aaPredicted RBP8.19□□□□□ -1.1
RNU4-1-201ENST00000363925 ZSWIM6Q9HCJ5 1215 aa8.19□□□□□ -1.1
RNU4-1-201ENST00000363925 SEMA3EO15041 775 aa8.18□□□□□ -1.1
RNU4-1-201ENST00000363925 PDIA6Q15084 440 aa8.17□□□□□ -1.1
RNU4-1-201ENST00000363925 DDX12PQ92771 950 aa8.17□□□□□ -1.1
RNU4-1-201ENST00000363925 ST18O60284 1047 aa8.16□□□□□ -1.1
RNU4-1-201ENST00000363925 GPR153Q6NV75 609 aa8.16□□□□□ -1.1
RNU4-1-201ENST00000363925 MARVELD3Q96A59 401 aa8.16□□□□□ -1.1
RNU4-1-201ENST00000363925 HOXB1P14653 301 aaPredicted RBP8.15□□□□□ -1.1
RNU4-1-201ENST00000363925 EMP3P54852 163 aa8.15□□□□□ -1.1
RNU4-1-201ENST00000363925 ARIH1Q9Y4X5 557 aaPredicted RBP8.15□□□□□ -1.1
RNU4-1-201ENST00000363925 ERBB3P21860 1342 aa8.14□□□□□ -1.11
RNU4-1-201ENST00000363925 SMYD5Q6GMV2 418 aa8.14□□□□□ -1.11
RNU4-1-201ENST00000363925 MLLT3P42568 568 aaPredicted RBP8.13□□□□□ -1.11
RNU4-1-201ENST00000363925 ZNF454Q8N9F8 522 aa8.13□□□□□ -1.11
RNU4-1-201ENST00000363925 LHX6Q9UPM6 363 aa8.13□□□□□ -1.11
RNU4-1-201ENST00000363925 RBM33Q96EV2 1170 aaKnown RBP8.12□□□□□ -1.11
RNU4-1-201ENST00000363925 FAM205CA6NFA0 338 aa8.11□□□□□ -1.11
RNU4-1-201ENST00000363925 TESPA1A2RU30 521 aaPredicted RBP8.09□□□□□ -1.11
RNU4-1-201ENST00000363925 PPP4R3BQ5MIZ7 849 aa8.09□□□□□ -1.11
RNU4-1-201ENST00000363925 VARS2Q5ST30 1063 aaKnown RBP8.08□□□□□ -1.12
RNU4-1-201ENST00000363925 ANO8Q9HCE9 1232 aaPredicted RBP8.08□□□□□ -1.12
RNU4-1-201ENST00000363925 NUTM2FA1L443 756 aa8.07□□□□□ -1.12
RNU4-1-201ENST00000363925 MAP3K7O43318 606 aa8.07□□□□□ -1.12
RNU4-1-201ENST00000363925 PHF14O94880 888 aa8.07□□□□□ -1.12
RNU4-1-201ENST00000363925 TYW1BQ6NUM6 668 aa8.07□□□□□ -1.12
RNU4-1-201ENST00000363925 PSDA5PKW4 1024 aaPredicted RBP8.06□□□□□ -1.12
RNU4-1-201ENST00000363925 ZDHHC16Q969W1 377 aa8.06□□□□□ -1.12
RNU4-1-201ENST00000363925 JPH4Q96JJ6 628 aa8.06□□□□□ -1.12
RNU4-1-201ENST00000363925 EPAS1Q99814 870 aa8.06□□□□□ -1.12
RNU4-1-201ENST00000363925 PCDHGA10Q9Y5H3 936 aa8.06□□□□□ -1.12
RNU4-1-201ENST00000363925 PTGER2P43116 358 aa8.05□□□□□ -1.12
RNU4-1-201ENST00000363925 FOSBP53539 338 aa8.05□□□□□ -1.12
RNU4-1-201ENST00000363925 RBM26Q5T8P6 1007 aaKnown RBP8.05□□□□□ -1.12
RNU4-1-201ENST00000363925 LMOD2Q6P5Q4 547 aa8.05□□□□□ -1.12
RNU4-1-201ENST00000363925 KCNH8Q96L42 1107 aa8.05□□□□□ -1.12
RNU4-1-201ENST00000363925 KDM4FA0A1W2PPD8 638 aa8.04□□□□□ -1.12
RNU4-1-201ENST00000363925 FBXW7Q969H0 707 aa8.04□□□□□ -1.12
RNU4-1-201ENST00000363925 HS3ST6Q96QI5 342 aa8.03□□□□□ -1.12
RNU4-1-201ENST00000363925 OSBPP22059 807 aa8.02□□□□□ -1.13
RNU4-1-201ENST00000363925 GPIHBP1Q8IV16 184 aa8.02□□□□□ -1.13
RNU4-1-201ENST00000363925 EN1Q05925 392 aaPredicted RBP8.01□□□□□ -1.13
RNU4-1-201ENST00000363925 LCE2DQ5TA82 110 aaPredicted RBP8.01□□□□□ -1.13
RNU4-1-201ENST00000363925 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.01□□□□□ -1.13
RNU4-1-201ENST00000363925 KCNK17Q96T54 332 aa8.01□□□□□ -1.13
RNU4-1-201ENST00000363925 ADAM33Q9BZ11 813 aa8.01□□□□□ -1.13
RNU4-1-201ENST00000363925 PTPREP23469 700 aa8□□□□□ -1.13
RNU4-1-201ENST00000363925 PRIM1P49642 420 aaKnown RBP7.99□□□□□ -1.13
RNU4-1-201ENST00000363925 TSR1Q2NL82 804 aaKnown RBP7.99□□□□□ -1.13
RNU4-1-201ENST00000363925 CDHR5Q9HBB8 845 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms