RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 ZFP91Q96JP5 570 aaPredicted RBP8.79□□□□□ -1
RNU6-238P-201ENST00000363313 VARS2Q5ST30 1063 aaKnown RBP8.78□□□□□ -1
RNU6-238P-201ENST00000363313 MS4A4AQ96JQ5 239 aa8.78□□□□□ -1
RNU6-238P-201ENST00000363313 NLRP6P59044 892 aa8.77□□□□□ -1.01
RNU6-238P-201ENST00000363313 RNF25Q96BH1 459 aaPredicted RBP8.77□□□□□ -1.01
RNU6-238P-201ENST00000363313 RNF166Q96A37 237 aaPredicted RBP8.75□□□□□ -1.01
RNU6-238P-201ENST00000363313 PHF8Q9UPP1 1060 aa8.75□□□□□ -1.01
RNU6-238P-201ENST00000363313 MYT1LQ9UL68 1186 aa8.73□□□□□ -1.01
RNU6-238P-201ENST00000363313 FBXO22Q8NEZ5 403 aa8.71□□□□□ -1.02
RNU6-238P-201ENST00000363313 ZNF316A6NFI3 1004 aaPredicted RBP8.69□□□□□ -1.02
RNU6-238P-201ENST00000363313 ARSIQ5FYB1 569 aa8.68□□□□□ -1.02
RNU6-238P-201ENST00000363313 SLC34A2O95436 690 aa8.67□□□□□ -1.02
RNU6-238P-201ENST00000363313 BCL11BQ9C0K0 894 aaPredicted RBP8.67□□□□□ -1.02
RNU6-238P-201ENST00000363313 KIF3CO14782 793 aa8.66□□□□□ -1.02
RNU6-238P-201ENST00000363313 PBX2P40425 430 aa8.66□□□□□ -1.02
RNU6-238P-201ENST00000363313 MFRPQ9BY79 579 aa8.64□□□□□ -1.03
RNU6-238P-201ENST00000363313 STK24Q9Y6E0 443 aa8.63□□□□□ -1.03
RNU6-238P-201ENST00000363313 LSM11P83369 360 aaKnown RBP eCLIP8.61□□□□□ -1.03
RNU6-238P-201ENST00000363313 ANKRD13DQ6ZTN6 518 aa8.6□□□□□ -1.03
RNU6-238P-201ENST00000363313 PSDA5PKW4 1024 aaPredicted RBP8.59□□□□□ -1.03
RNU6-238P-201ENST00000363313 C2orf72A6NCS6 295 aa8.59□□□□□ -1.03
RNU6-238P-201ENST00000363313 STK25O00506 426 aa8.59□□□□□ -1.03
RNU6-238P-201ENST00000363313 ECM2O94769 699 aaPredicted RBP8.56□□□□□ -1.04
RNU6-238P-201ENST00000363313 TMC2Q8TDI7 906 aa8.56□□□□□ -1.04
RNU6-238P-201ENST00000363313 KHSRPQ92945 711 aaKnown RBP eCLIP8.56□□□□□ -1.04
RNU6-238P-201ENST00000363313 PCDHGA4Q9Y5G9 962 aa8.56□□□□□ -1.04
RNU6-238P-201ENST00000363313 NUDT7P0C024 238 aa8.53□□□□□ -1.04
RNU6-238P-201ENST00000363313 LHX6Q9UPM6 363 aa8.53□□□□□ -1.04
RNU6-238P-201ENST00000363313 PTCD2Q8WV60 388 aaKnown RBP8.51□□□□□ -1.05
RNU6-238P-201ENST00000363313 HCSTQ9UBK5 93 aa8.51□□□□□ -1.05
RNU6-238P-201ENST00000363313 TK2O00142 265 aa8.5□□□□□ -1.05
RNU6-238P-201ENST00000363313 ARHGAP33O14559 1287 aa8.5□□□□□ -1.05
RNU6-238P-201ENST00000363313 KDM4FA0A1W2PPD8 638 aa8.49□□□□□ -1.05
RNU6-238P-201ENST00000363313 POTEEQ6S8J3 1075 aa8.49□□□□□ -1.05
RNU6-238P-201ENST00000363313 PKD2Q13563 968 aa8.47□□□□□ -1.05
RNU6-238P-201ENST00000363313 FOXK1P85037 733 aa8.46□□□□□ -1.06
RNU6-238P-201ENST00000363313 ADGRD1Q6QNK2 874 aa8.46□□□□□ -1.06
RNU6-238P-201ENST00000363313 RGL2O15211 777 aa8.45□□□□□ -1.06
RNU6-238P-201ENST00000363313 TBC1D12O60347 775 aa8.45□□□□□ -1.06
RNU6-238P-201ENST00000363313 GPHNQ9NQX3 736 aaPredicted RBP8.44□□□□□ -1.06
RNU6-238P-201ENST00000363313 AXIN2Q9Y2T1 843 aa8.43□□□□□ -1.06
RNU6-238P-201ENST00000363313 HRO43593 1189 aa8.42□□□□□ -1.06
RNU6-238P-201ENST00000363313 PPP1R37O75864 691 aa8.42□□□□□ -1.06
RNU6-238P-201ENST00000363313 PLA2G2EQ9NZK7 142 aa8.42□□□□□ -1.06
RNU6-238P-201ENST00000363313 PPP4R3BQ5MIZ7 849 aa8.41□□□□□ -1.06
RNU6-238P-201ENST00000363313 PLPP6Q8IY26 295 aa8.39□□□□□ -1.07
RNU6-238P-201ENST00000363313 KCNH8Q96L42 1107 aa8.39□□□□□ -1.07
RNU6-238P-201ENST00000363313 HS6ST3Q8IZP7 471 aa8.38□□□□□ -1.07
RNU6-238P-201ENST00000363313 RYDENQ9NUL5 291 aaKnown RBP8.38□□□□□ -1.07
RNU6-238P-201ENST00000363313 DNAJC5Q9H3Z4 198 aa8.37□□□□□ -1.07
RNU6-238P-201ENST00000363313 STAC3Q96MF2 364 aa8.36□□□□□ -1.07
RNU6-238P-201ENST00000363313 SLC4A5Q9BY07 1137 aa8.36□□□□□ -1.07
RNU6-238P-201ENST00000363313 RGS20O76081 388 aa8.33□□□□□ -1.08
RNU6-238P-201ENST00000363313 PSEN2P49810 448 aa8.33□□□□□ -1.08
RNU6-238P-201ENST00000363313 DSG2Q14126 1118 aa8.33□□□□□ -1.08
RNU6-238P-201ENST00000363313 IFFO2Q5TF58 517 aa8.33□□□□□ -1.08
RNU6-238P-201ENST00000363313 DMRTA1Q5VZB9 504 aa8.33□□□□□ -1.08
RNU6-238P-201ENST00000363313 OXER1Q8TDS5 423 aa8.31□□□□□ -1.08
RNU6-238P-201ENST00000363313 BCL2L12Q9HB09 334 aa8.29□□□□□ -1.08
RNU6-238P-201ENST00000363313 VPS9D1Q9Y2B5 631 aa8.29□□□□□ -1.08
RNU6-238P-201ENST00000363313 KCTD12Q96CX2 325 aaKnown RBP8.28□□□□□ -1.08
RNU6-238P-201ENST00000363313 KCNK17Q96T54 332 aa8.27□□□□□ -1.09
RNU6-238P-201ENST00000363313 ANO8Q9HCE9 1232 aaPredicted RBP8.27□□□□□ -1.09
RNU6-238P-201ENST00000363313 CRISPLD2Q9H0B8 497 aa8.26□□□□□ -1.09
RNU6-238P-201ENST00000363313 BHMG1C9JSJ3 638 aaPredicted RBP8.24□□□□□ -1.09
RNU6-238P-201ENST00000363313 PTPREP23469 700 aa8.24□□□□□ -1.09
RNU6-238P-201ENST00000363313 PDE4AP27815 886 aa8.24□□□□□ -1.09
RNU6-238P-201ENST00000363313 FOSBP53539 338 aa8.24□□□□□ -1.09
RNU6-238P-201ENST00000363313 ZNF454Q8N9F8 522 aa8.23□□□□□ -1.09
RNU6-238P-201ENST00000363313 CHGAP10645 457 aaKnown RBP8.22□□□□□ -1.09
RNU6-238P-201ENST00000363313 PPP1R15BQ5SWA1 713 aa8.22□□□□□ -1.09
RNU6-238P-201ENST00000363313 JPH4Q96JJ6 628 aa8.21□□□□□ -1.1
RNU6-238P-201ENST00000363313 ZBED2Q9BTP6 218 aa8.2□□□□□ -1.1
RNU6-238P-201ENST00000363313 THSD4Q6ZMP0 1018 aa8.19□□□□□ -1.1
RNU6-238P-201ENST00000363313 GOLGA8CPA6NN73 597 aa8.18□□□□□ -1.1
RNU6-238P-201ENST00000363313 NKX1-1Q15270 411 aaPredicted RBP8.18□□□□□ -1.1
RNU6-238P-201ENST00000363313 MRPL50Q8N5N7 158 aaKnown RBP8.18□□□□□ -1.1
RNU6-238P-201ENST00000363313 ZDHHC16Q969W1 377 aa8.18□□□□□ -1.1
RNU6-238P-201ENST00000363313 NBPF3Q9H094 633 aa8.18□□□□□ -1.1
RNU6-238P-201ENST00000363313 PTPN5P54829 565 aa8.17□□□□□ -1.1
RNU6-238P-201ENST00000363313 UPF1Q92900 1129 aaKnown RBP eCLIP8.17□□□□□ -1.1
RNU6-238P-201ENST00000363313 EVI5O60447 810 aa8.16□□□□□ -1.1
RNU6-238P-201ENST00000363313 WNT2BQ93097 391 aa8.15□□□□□ -1.1
RNU6-238P-201ENST00000363313 NCKAP5LQ9HCH0 1330 aa8.14□□□□□ -1.11
RNU6-238P-201ENST00000363313 A0A0G2JS52 829 aa8.14□□□□□ -1.11
RNU6-238P-201ENST00000363313 MFSD10Q14728 455 aa8.13□□□□□ -1.11
RNU6-238P-201ENST00000363313 ONECUT3O60422 494 aaPredicted RBP8.12□□□□□ -1.11
RNU6-238P-201ENST00000363313 MAP3K9P80192 1104 aa8.12□□□□□ -1.11
RNU6-238P-201ENST00000363313 NYAP1Q6ZVC0 841 aa8.12□□□□□ -1.11
RNU6-238P-201ENST00000363313 DDX27Q96GQ7 796 aaKnown RBP8.12□□□□□ -1.11
RNU6-238P-201ENST00000363313 RABGEF1Q9UJ41 708 aa8.12□□□□□ -1.11
RNU6-238P-201ENST00000363313 PPP1R3GB7ZBB8 358 aa8.11□□□□□ -1.11
RNU6-238P-201ENST00000363313 LAPTM4BQ86VI4 370 aa8.11□□□□□ -1.11
RNU6-238P-201ENST00000363313 FBXW7Q969H0 707 aa8.11□□□□□ -1.11
RNU6-238P-201ENST00000363313 ADAM33Q9BZ11 813 aa8.11□□□□□ -1.11
RNU6-238P-201ENST00000363313 IRX2Q9BZI1 471 aaPredicted RBP8.1□□□□□ -1.11
RNU6-238P-201ENST00000363313 LARP6Q9BRS8 491 aaKnown RBP8.09□□□□□ -1.11
RNU6-238P-201ENST00000363313 GTPBP6O43824 516 aaPredicted RBP8.08□□□□□ -1.12
RNU6-238P-201ENST00000363313 ITGBL1O95965 494 aaPredicted RBP8.08□□□□□ -1.12
RNU6-238P-201ENST00000363313 ANKK1Q8NFD2 765 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms