RNA–Protein interactions for RNA: ENST00000362985.1

RNU6-490P-201, Transcript of RNA, U6 small nuclear 490, pseudogene, humanhuman

BASIC

Gene RNU6-490P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-490P-201ENST00000362985 FAM205CA6NFA0 338 aa8.24□□□□□ -1.09
RNU6-490P-201ENST00000362985 HOXB1P14653 301 aaPredicted RBP8.24□□□□□ -1.09
RNU6-490P-201ENST00000362985 DOK7Q18PE1 504 aa8.24□□□□□ -1.09
RNU6-490P-201ENST00000362985 HS3ST6Q96QI5 342 aa8.23□□□□□ -1.09
RNU6-490P-201ENST00000362985 CHGAP10645 457 aaKnown RBP8.22□□□□□ -1.09
RNU6-490P-201ENST00000362985 ZNF710Q8N1W2 664 aa8.22□□□□□ -1.09
RNU6-490P-201ENST00000362985 KIF3CO14782 793 aa8.21□□□□□ -1.1
RNU6-490P-201ENST00000362985 C2orf72A6NCS6 295 aa8.2□□□□□ -1.1
RNU6-490P-201ENST00000362985 NKX1-1Q15270 411 aaPredicted RBP8.19□□□□□ -1.1
RNU6-490P-201ENST00000362985 GPR153Q6NV75 609 aa8.19□□□□□ -1.1
RNU6-490P-201ENST00000362985 RIMBP2O15034 1052 aa8.17□□□□□ -1.1
RNU6-490P-201ENST00000362985 KRTAP3-3Q9BYR6 98 aa8.17□□□□□ -1.1
RNU6-490P-201ENST00000362985 KRTAP3-2Q9BYR7 98 aa8.17□□□□□ -1.1
RNU6-490P-201ENST00000362985 DNAJC5Q9H3Z4 198 aa8.16□□□□□ -1.1
RNU6-490P-201ENST00000362985 ZSWIM6Q9HCJ5 1215 aa8.16□□□□□ -1.1
RNU6-490P-201ENST00000362985 ERBB3P21860 1342 aa8.15□□□□□ -1.1
RNU6-490P-201ENST00000362985 ARSIQ5FYB1 569 aa8.15□□□□□ -1.1
RNU6-490P-201ENST00000362985 KHSRPQ92945 711 aaKnown RBP eCLIP8.15□□□□□ -1.1
RNU6-490P-201ENST00000362985 SPNS2Q8IVW8 549 aa8.14□□□□□ -1.11
RNU6-490P-201ENST00000362985 VARS2Q5ST30 1063 aaKnown RBP8.11□□□□□ -1.11
RNU6-490P-201ENST00000362985 TMC2Q8TDI7 906 aa8.11□□□□□ -1.11
RNU6-490P-201ENST00000362985 MMRN1Q13201 1228 aa8.1□□□□□ -1.11
RNU6-490P-201ENST00000362985 GTPBP6O43824 516 aaPredicted RBP8.07□□□□□ -1.12
RNU6-490P-201ENST00000362985 SLC34A2O95436 690 aa8.07□□□□□ -1.12
RNU6-490P-201ENST00000362985 PCDHGA4Q9Y5G9 962 aa8.07□□□□□ -1.12
RNU6-490P-201ENST00000362985 ZNF316A6NFI3 1004 aaPredicted RBP8.06□□□□□ -1.12
RNU6-490P-201ENST00000362985 NUDT7P0C024 238 aa8.06□□□□□ -1.12
RNU6-490P-201ENST00000362985 ZNF687Q8N1G0 1237 aa8.06□□□□□ -1.12
RNU6-490P-201ENST00000362985 GPHNQ9NQX3 736 aaPredicted RBP8.06□□□□□ -1.12
RNU6-490P-201ENST00000362985 FOXK1P85037 733 aa8.05□□□□□ -1.12
RNU6-490P-201ENST00000362985 DCAF8L2P0C7V8 631 aa8.04□□□□□ -1.12
RNU6-490P-201ENST00000362985 DSG2Q14126 1118 aa8.04□□□□□ -1.12
RNU6-490P-201ENST00000362985 PLPP6Q8IY26 295 aa8.04□□□□□ -1.12
RNU6-490P-201ENST00000362985 LHX6Q9UPM6 363 aa8.02□□□□□ -1.13
RNU6-490P-201ENST00000362985 KDM4FA0A1W2PPD8 638 aa8.01□□□□□ -1.13
RNU6-490P-201ENST00000362985 PTCD2Q8WV60 388 aaKnown RBP8.01□□□□□ -1.13
RNU6-490P-201ENST00000362985 RYDENQ9NUL5 291 aaKnown RBP8.01□□□□□ -1.13
RNU6-490P-201ENST00000362985 CRISPLD2Q9H0B8 497 aa8□□□□□ -1.13
RNU6-490P-201ENST00000362985 POTEEQ6S8J3 1075 aa7.99□□□□□ -1.13
RNU6-490P-201ENST00000362985 NCKAP5LQ9HCH0 1330 aa7.99□□□□□ -1.13
RNU6-490P-201ENST00000362985 PDE4AP27815 886 aa7.94□□□□□ -1.14
RNU6-490P-201ENST00000362985 PPP1R15BQ5SWA1 713 aa7.94□□□□□ -1.14
RNU6-490P-201ENST00000362985 OXER1Q8TDS5 423 aa7.94□□□□□ -1.14
RNU6-490P-201ENST00000362985 AXIN2Q9Y2T1 843 aa7.94□□□□□ -1.14
RNU6-490P-201ENST00000362985 ANKRD13DQ6ZTN6 518 aa7.93□□□□□ -1.14
RNU6-490P-201ENST00000362985 CADPS2Q86UW7 1296 aa7.93□□□□□ -1.14
RNU6-490P-201ENST00000362985 LSM11P83369 360 aaKnown RBP eCLIP7.92□□□□□ -1.14
RNU6-490P-201ENST00000362985 UPF1Q92900 1129 aaKnown RBP eCLIP7.92□□□□□ -1.14
RNU6-490P-201ENST00000362985 LARP6Q9BRS8 491 aaKnown RBP7.91□□□□□ -1.14
RNU6-490P-201ENST00000362985 RTN4Q9NQC3 1192 aaKnown RBP7.91□□□□□ -1.14
RNU6-490P-201ENST00000362985 TBC1D12O60347 775 aa7.9□□□□□ -1.14
RNU6-490P-201ENST00000362985 PBX2P40425 430 aa7.89□□□□□ -1.15
RNU6-490P-201ENST00000362985 MFSD10Q14728 455 aa7.89□□□□□ -1.15
RNU6-490P-201ENST00000362985 BBXQ8WY36 941 aaPredicted RBP7.88□□□□□ -1.15
RNU6-490P-201ENST00000362985 RNF166Q96A37 237 aaPredicted RBP7.88□□□□□ -1.15
RNU6-490P-201ENST00000362985 MYT1LQ9UL68 1186 aa7.88□□□□□ -1.15
RNU6-490P-201ENST00000362985 PSDA5PKW4 1024 aaPredicted RBP7.87□□□□□ -1.15
RNU6-490P-201ENST00000362985 AMER1Q5JTC6 1135 aaPredicted RBP7.87□□□□□ -1.15
RNU6-490P-201ENST00000362985 DDX27Q96GQ7 796 aaKnown RBP7.87□□□□□ -1.15
RNU6-490P-201ENST00000362985 ARHGAP33O14559 1287 aa7.86□□□□□ -1.15
RNU6-490P-201ENST00000362985 PSEN2P49810 448 aa7.86□□□□□ -1.15
RNU6-490P-201ENST00000362985 DMRTA1Q5VZB9 504 aa7.86□□□□□ -1.15
RNU6-490P-201ENST00000362985 EMILIN3Q9NT22 766 aa7.85□□□□□ -1.15
RNU6-490P-201ENST00000362985 PPP4R3BQ5MIZ7 849 aa7.84□□□□□ -1.15
RNU6-490P-201ENST00000362985 ANO8Q9HCE9 1232 aaPredicted RBP7.84□□□□□ -1.15
RNU6-490P-201ENST00000362985 PTGER2P43116 358 aa7.83□□□□□ -1.16
RNU6-490P-201ENST00000362985 EVI5O60447 810 aa7.82□□□□□ -1.16
RNU6-490P-201ENST00000362985 ADGRD1Q6QNK2 874 aa7.82□□□□□ -1.16
RNU6-490P-201ENST00000362985 FOSBP53539 338 aa7.81□□□□□ -1.16
RNU6-490P-201ENST00000362985 ZNF454Q8N9F8 522 aa7.81□□□□□ -1.16
RNU6-490P-201ENST00000362985 HRO43593 1189 aa7.79□□□□□ -1.16
RNU6-490P-201ENST00000362985 MAP3K9P80192 1104 aa7.79□□□□□ -1.16
RNU6-490P-201ENST00000362985 KCNK17Q96T54 332 aa7.79□□□□□ -1.16
RNU6-490P-201ENST00000362985 TK2O00142 265 aa7.78□□□□□ -1.16
RNU6-490P-201ENST00000362985 SPRYD3Q8NCJ5 442 aa7.78□□□□□ -1.16
RNU6-490P-201ENST00000362985 CAMK2BQ13554 666 aa7.77□□□□□ -1.17
RNU6-490P-201ENST00000362985 BCL2L12Q9HB09 334 aa7.77□□□□□ -1.17
RNU6-490P-201ENST00000362985 JPH4Q96JJ6 628 aa7.76□□□□□ -1.17
RNU6-490P-201ENST00000362985 ADAM33Q9BZ11 813 aa7.76□□□□□ -1.17
RNU6-490P-201ENST00000362985 PAXIP1Q6ZW49 1069 aaPredicted RBP7.74□□□□□ -1.17
RNU6-490P-201ENST00000362985 ZDHHC16Q969W1 377 aa7.74□□□□□ -1.17
RNU6-490P-201ENST00000362985 CFAP44Q96MT7 982 aa7.74□□□□□ -1.17
RNU6-490P-201ENST00000362985 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.74□□□□□ -1.17
RNU6-490P-201ENST00000362985 VPS9D1Q9Y2B5 631 aa7.74□□□□□ -1.17
RNU6-490P-201ENST00000362985 PCDHGA10Q9Y5H3 936 aa7.74□□□□□ -1.17
RNU6-490P-201ENST00000362985 DPYSL4O14531 572 aa7.73□□□□□ -1.17
RNU6-490P-201ENST00000362985 PTPREP23469 700 aa7.72□□□□□ -1.17
RNU6-490P-201ENST00000362985 ZBED2Q9BTP6 218 aa7.71□□□□□ -1.18
RNU6-490P-201ENST00000362985 SLC4A5Q9BY07 1137 aa7.71□□□□□ -1.18
RNU6-490P-201ENST00000362985 KCNH8Q96L42 1107 aa7.7□□□□□ -1.18
RNU6-490P-201ENST00000362985 BHMG1C9JSJ3 638 aaPredicted RBP7.69□□□□□ -1.18
RNU6-490P-201ENST00000362985 PHF14O94880 888 aa7.68□□□□□ -1.18
RNU6-490P-201ENST00000362985 TYW1BQ6NUM6 668 aa7.68□□□□□ -1.18
RNU6-490P-201ENST00000362985 COL9A1P20849 921 aa7.67□□□□□ -1.18
RNU6-490P-201ENST00000362985 KCTD12Q96CX2 325 aaKnown RBP7.67□□□□□ -1.18
RNU6-490P-201ENST00000362985 STAC3Q96MF2 364 aa7.66□□□□□ -1.18
RNU6-490P-201ENST00000362985 HCSTQ9UBK5 93 aa7.66□□□□□ -1.18
RNU6-490P-201ENST00000362985 DDX12PQ92771 950 aa7.65□□□□□ -1.18
RNU6-490P-201ENST00000362985 PPP1R3GB7ZBB8 358 aa7.64□□□□□ -1.19
RNU6-490P-201ENST00000362985 PROX2Q3B8N5 592 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms