RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 EMILIN3Q9NT22 766 aa10.21□□□□□ -0.77
RPL39-201ENST00000361575 PDCD7Q8N8D1 485 aaKnown RBP10.2□□□□□ -0.78
RPL39-201ENST00000361575 RBM26Q5T8P6 1007 aaKnown RBP10.19□□□□□ -0.78
RPL39-201ENST00000361575 SMYD5Q6GMV2 418 aa10.19□□□□□ -0.78
RPL39-201ENST00000361575 DSG2Q14126 1118 aa10.18□□□□□ -0.78
RPL39-201ENST00000361575 BARGINQ6ZT62 677 aa10.18□□□□□ -0.78
RPL39-201ENST00000361575 MICALL2Q8IY33 904 aa10.18□□□□□ -0.78
RPL39-201ENST00000361575 NEUROD2Q15784 382 aa10.17□□□□□ -0.78
RPL39-201ENST00000361575 DPYSL4O14531 572 aa10.16□□□□□ -0.78
RPL39-201ENST00000361575 EVX2Q03828 476 aa10.16□□□□□ -0.78
RPL39-201ENST00000361575 ATN1P54259 1190 aaPredicted RBP10.13□□□□□ -0.79
RPL39-201ENST00000361575 PDIA6Q15084 440 aa10.13□□□□□ -0.79
RPL39-201ENST00000361575 IRX5P78411 483 aaPredicted RBP10.12□□□□□ -0.79
RPL39-201ENST00000361575 FOXK1P85037 733 aa10.12□□□□□ -0.79
RPL39-201ENST00000361575 TMEM121BQ9BXQ6 578 aaPredicted RBP10.12□□□□□ -0.79
RPL39-201ENST00000361575 KIF3CO14782 793 aa10.11□□□□□ -0.79
RPL39-201ENST00000361575 GPIHBP1Q8IV16 184 aa10.11□□□□□ -0.79
RPL39-201ENST00000361575 GPR37O15354 613 aa10.09□□□□□ -0.79
RPL39-201ENST00000361575 ATMINO43313 823 aaPredicted RBP10.09□□□□□ -0.79
RPL39-201ENST00000361575 SPDYE16A6NNV3 312 aaPredicted RBP10.08□□□□□ -0.8
RPL39-201ENST00000361575 C2orf72A6NCS6 295 aa10.07□□□□□ -0.8
RPL39-201ENST00000361575 ASTLQ6HA08 431 aaPredicted RBP10.07□□□□□ -0.8
RPL39-201ENST00000361575 PLPP6Q8IY26 295 aa10.07□□□□□ -0.8
RPL39-201ENST00000361575 TMC2Q8TDI7 906 aa10.07□□□□□ -0.8
RPL39-201ENST00000361575 AK7Q96M32 723 aa10.06□□□□□ -0.8
RPL39-201ENST00000361575 GPBP1L1Q9HC44 474 aaPredicted RBP10.05□□□□□ -0.8
RPL39-201ENST00000361575 BOLA1Q9Y3E2 137 aa10.05□□□□□ -0.8
RPL39-201ENST00000361575 TMEM92Q6UXU6 159 aa10.04□□□□□ -0.8
RPL39-201ENST00000361575 ERICH6Q7L0X2 663 aa10.04□□□□□ -0.8
RPL39-201ENST00000361575 OCEL1Q9H607 264 aa10.04□□□□□ -0.8
RPL39-201ENST00000361575 HAX1O00165 279 aa10.03□□□□□ -0.8
RPL39-201ENST00000361575 IER5LQ5T953 404 aa10.03□□□□□ -0.8
RPL39-201ENST00000361575 C14orf37Q86TY3 774 aa10.03□□□□□ -0.8
RPL39-201ENST00000361575 CLCN6P51797 869 aa10.01□□□□□ -0.81
RPL39-201ENST00000361575 TRIM66O15016 1216 aa10□□□□□ -0.81
RPL39-201ENST00000361575 KRI1Q8N9T8 703 aaKnown RBP9.98□□□□□ -0.81
RPL39-201ENST00000361575 PELP1Q8IZL8 1130 aaKnown RBP9.97□□□□□ -0.81
RPL39-201ENST00000361575 KDM4CQ9H3R0 1056 aa9.97□□□□□ -0.81
RPL39-201ENST00000361575 OSBPP22059 807 aa9.96□□□□□ -0.82
RPL39-201ENST00000361575 PDE4DQ08499 809 aa9.96□□□□□ -0.82
RPL39-201ENST00000361575 OXER1Q8TDS5 423 aa9.96□□□□□ -0.82
RPL39-201ENST00000361575 COLQQ9Y215 455 aaPredicted RBP9.96□□□□□ -0.82
RPL39-201ENST00000361575 GRXCR2A6NFK2 248 aa9.95□□□□□ -0.82
RPL39-201ENST00000361575 PRIM1P49642 420 aaKnown RBP9.95□□□□□ -0.82
RPL39-201ENST00000361575 UPF1Q92900 1129 aaKnown RBP eCLIP9.95□□□□□ -0.82
RPL39-201ENST00000361575 PLCG2P16885 1265 aa9.94□□□□□ -0.82
RPL39-201ENST00000361575 MAP3K9P80192 1104 aa9.94□□□□□ -0.82
RPL39-201ENST00000361575 PTGER2P43116 358 aa9.93□□□□□ -0.82
RPL39-201ENST00000361575 POTEFA5A3E0 1075 aa9.92□□□□□ -0.82
RPL39-201ENST00000361575 IL27Q8NEV9 243 aa9.92□□□□□ -0.82
RPL39-201ENST00000361575 GABBR2O75899 941 aa9.9□□□□□ -0.82
RPL39-201ENST00000361575 FECHP22830 423 aa9.9□□□□□ -0.82
RPL39-201ENST00000361575 CCDC102AQ96A19 550 aa9.9□□□□□ -0.82
RPL39-201ENST00000361575 L3MBTL3Q96JM7 780 aaPredicted RBP9.9□□□□□ -0.82
RPL39-201ENST00000361575 MINK1Q8N4C8 1332 aaPredicted RBP9.89□□□□□ -0.83
RPL39-201ENST00000361575 NUTM2FA1L443 756 aa9.89□□□□□ -0.83
RPL39-201ENST00000361575 G3V3G9 751 aa9.89□□□□□ -0.83
RPL39-201ENST00000361575 MAP2K5Q13163 448 aa9.89□□□□□ -0.83
RPL39-201ENST00000361575 DDX12PQ92771 950 aa9.89□□□□□ -0.83
RPL39-201ENST00000361575 IRF6O14896 467 aa9.87□□□□□ -0.83
RPL39-201ENST00000361575 FAM117AQ9C073 453 aa9.87□□□□□ -0.83
RPL39-201ENST00000361575 GNPATO15228 680 aa9.85□□□□□ -0.83
RPL39-201ENST00000361575 EVI5O60447 810 aa9.85□□□□□ -0.83
RPL39-201ENST00000361575 AMHR2Q16671 573 aa9.85□□□□□ -0.83
RPL39-201ENST00000361575 PLEKHG3A1L390 1219 aa9.84□□□□□ -0.83
RPL39-201ENST00000361575 PARP9Q8IXQ6 854 aa9.84□□□□□ -0.83
RPL39-201ENST00000361575 SEC24BO95487 1268 aa9.83□□□□□ -0.84
RPL39-201ENST00000361575 HIC1Q14526 733 aa9.83□□□□□ -0.84
RPL39-201ENST00000361575 PTCD2Q8WV60 388 aaKnown RBP9.83□□□□□ -0.84
RPL39-201ENST00000361575 ARXQ96QS3 562 aa9.83□□□□□ -0.84
RPL39-201ENST00000361575 FCHSD2O94868 740 aa9.82□□□□□ -0.84
RPL39-201ENST00000361575 PTGDRQ13258 359 aa9.82□□□□□ -0.84
RPL39-201ENST00000361575 ANO8Q9HCE9 1232 aaPredicted RBP9.8□□□□□ -0.84
RPL39-201ENST00000361575 SUPT5HO00267 1087 aaKnown RBP9.79□□□□□ -0.84
RPL39-201ENST00000361575 TBC1D12O60347 775 aa9.79□□□□□ -0.84
RPL39-201ENST00000361575 POTEIP0CG38 1075 aa9.79□□□□□ -0.84
RPL39-201ENST00000361575 SLC39A7Q92504 469 aa9.79□□□□□ -0.84
RPL39-201ENST00000361575 CDHR5Q9HBB8 845 aa9.79□□□□□ -0.84
RPL39-201ENST00000361575 DAXXQ9UER7 740 aaPredicted RBP9.79□□□□□ -0.84
RPL39-201ENST00000361575 SLC34A2O95436 690 aa9.78□□□□□ -0.84
RPL39-201ENST00000361575 DCBLD2Q96PD2 775 aa9.78□□□□□ -0.84
RPL39-201ENST00000361575 NPDC1Q9NQX5 325 aaPredicted RBP9.78□□□□□ -0.84
RPL39-201ENST00000361575 ZNF316A6NFI3 1004 aaPredicted RBP9.76□□□□□ -0.85
RPL39-201ENST00000361575 C7P10643 843 aa9.76□□□□□ -0.85
RPL39-201ENST00000361575 REPIN1Q9BWE0 567 aaKnown RBP9.76□□□□□ -0.85
RPL39-201ENST00000361575 METRNQ9UJH8 293 aa9.76□□□□□ -0.85
RPL39-201ENST00000361575 EN1Q05925 392 aaPredicted RBP9.74□□□□□ -0.85
RPL39-201ENST00000361575 DDRGK1Q96HY6 314 aa9.74□□□□□ -0.85
RPL39-201ENST00000361575 KDM4FA0A1W2PPD8 638 aa9.72□□□□□ -0.85
RPL39-201ENST00000361575 MS4A1P11836 297 aa9.72□□□□□ -0.85
RPL39-201ENST00000361575 C3orf67Q6ZVT6 689 aa9.72□□□□□ -0.85
RPL39-201ENST00000361575 PCDHGA10Q9Y5H3 936 aa9.72□□□□□ -0.85
RPL39-201ENST00000361575 PHF14O94880 888 aa9.71□□□□□ -0.86
RPL39-201ENST00000361575 GIGYF2Q6Y7W6 1299 aaKnown RBP9.71□□□□□ -0.86
RPL39-201ENST00000361575 TMUB1Q9BVT8 246 aa9.71□□□□□ -0.86
RPL39-201ENST00000361575 TTLL12Q14166 644 aaPredicted RBP9.7□□□□□ -0.86
RPL39-201ENST00000361575 TSR1Q2NL82 804 aaKnown RBP9.7□□□□□ -0.86
RPL39-201ENST00000361575 PHOX2BQ99453 314 aa9.7□□□□□ -0.86
RPL39-201ENST00000361575 EPAS1Q99814 870 aa9.69□□□□□ -0.86
RPL39-201ENST00000361575 ZMYND15Q9H091 742 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms