RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 GLIPR1L2Q4G1C9 344 aa27.19■■□□□ 1.94
SMURF1-201ENST00000361125 OS9Q13438 667 aaPredicted RBP27.18■■□□□ 1.94
SMURF1-201ENST00000361125 NUP155O75694 1391 aa27.17■■□□□ 1.94
SMURF1-201ENST00000361125 ROCK2O75116 1388 aaKnown RBP27.16■■□□□ 1.94
SMURF1-201ENST00000361125 TAOK2Q9UL54 1235 aa27.15■■□□□ 1.94
SMURF1-201ENST00000361125 FHOD3Q2V2M9 1422 aa27.14■■□□□ 1.94
SMURF1-201ENST00000361125 TSHZ2Q9NRE2 1034 aa27.13■■□□□ 1.93
SMURF1-201ENST00000361125 HNRNPMP52272 730 aaKnown RBP eCLIP27.12■■□□□ 1.935e-7■■■■□ 21.4
SMURF1-201ENST00000361125 NPHP1O15259 732 aa27.12■■□□□ 1.93
SMURF1-201ENST00000361125 TRIM44Q96DX7 344 aaPredicted RBP27.12■■□□□ 1.93
SMURF1-201ENST00000361125 KTN1Q86UP2 1357 aaKnown RBP27.11■■□□□ 1.93
SMURF1-201ENST00000361125 MS4A1P11836 297 aa27.11■■□□□ 1.93
SMURF1-201ENST00000361125 ANKRD30AQ9BXX3 1397 aa27.09■■□□□ 1.93
SMURF1-201ENST00000361125 EFCAB2Q5VUJ9 269 aa27.09■■□□□ 1.93
SMURF1-201ENST00000361125 CDK11BP21127 795 aaKnown RBP27.09■■□□□ 1.93
SMURF1-201ENST00000361125 CHMP4BQ9H444 224 aaKnown RBP27.08■■□□□ 1.93
SMURF1-201ENST00000361125 RAPGEF2Q9Y4G8 1499 aa27.07■■□□□ 1.92
SMURF1-201ENST00000361125 HDGFL2Q7Z4V5 671 aaPredicted RBP27.06■■□□□ 1.92
SMURF1-201ENST00000361125 CADPSQ9ULU8 1353 aa27.05■■□□□ 1.92
SMURF1-201ENST00000361125 ZRSR1Q15695 479 aaKnown RBP27.03■■□□□ 1.92
SMURF1-201ENST00000361125 HSP90AB1P08238 724 aaKnown RBP27.02■■□□□ 1.92
SMURF1-201ENST00000361125 KIF3BO15066 747 aa27.02■■□□□ 1.92
SMURF1-201ENST00000361125 NUTM2DQ5VT03 806 aaPredicted RBP27.02■■□□□ 1.92
SMURF1-201ENST00000361125 PAK3O75914 559 aaPredicted RBP27.01■■□□□ 1.91
SMURF1-201ENST00000361125 DHX57Q6P158 1386 aaKnown RBP27.01■■□□□ 1.91
SMURF1-201ENST00000361125 PTMAP06454 111 aaKnown RBP27■■□□□ 1.91
SMURF1-201ENST00000361125 RTF1Q92541 710 aaKnown RBP27■■□□□ 1.91
SMURF1-201ENST00000361125 RUSC2Q8N2Y8 1516 aa27■■□□□ 1.91
SMURF1-201ENST00000361125 ERICH6BQ5W0A0 696 aa26.99■■□□□ 1.91
SMURF1-201ENST00000361125 KCNJ4P48050 445 aa26.97■■□□□ 1.91
SMURF1-201ENST00000361125 RTN4Q9NQC3 1192 aaKnown RBP26.96■■□□□ 1.91
SMURF1-201ENST00000361125 TULP1O00294 542 aaPredicted RBP26.96■■□□□ 1.91
SMURF1-201ENST00000361125 DEKP35659 375 aaKnown RBP26.96■■□□□ 1.91
SMURF1-201ENST00000361125 NAP1L2Q9ULW6 460 aaPredicted RBP26.96■■□□□ 1.91
SMURF1-201ENST00000361125 U2AF1L5P0DN76 240 aaPredicted RBP26.95■■□□□ 1.91
SMURF1-201ENST00000361125 FGD1P98174 961 aa26.95■■□□□ 1.91
SMURF1-201ENST00000361125 U2AF1Q01081 240 aaKnown RBP eCLIP26.95■■□□□ 1.91
SMURF1-201ENST00000361125 L3MBTL2Q969R5 705 aa26.93■■□□□ 1.9
SMURF1-201ENST00000361125 ATAD2BQ9ULI0 1458 aa26.92■■□□□ 1.9
SMURF1-201ENST00000361125 APBB1O00213 710 aa26.91■■□□□ 1.9
SMURF1-201ENST00000361125 SPRYD3Q8NCJ5 442 aa26.9■■□□□ 1.9
SMURF1-201ENST00000361125 RALBP1Q15311 655 aa26.9■■□□□ 1.9
SMURF1-201ENST00000361125 GOLGA2Q08379 1002 aa26.9■■□□□ 1.9
SMURF1-201ENST00000361125 SMARCA4P51532 1647 aa26.9■■□□□ 1.9
SMURF1-201ENST00000361125 CCDC18Q5T9S5 1454 aa26.89■■□□□ 1.9
SMURF1-201ENST00000361125 SPAG9O60271 1321 aaKnown RBP26.89■■□□□ 1.89
SMURF1-201ENST00000361125 JPH4Q96JJ6 628 aa26.88■■□□□ 1.89
SMURF1-201ENST00000361125 PLCB2Q00722 1185 aa26.87■■□□□ 1.89
SMURF1-201ENST00000361125 EIF3AQ14152 1382 aaKnown RBP26.87■■□□□ 1.89
SMURF1-201ENST00000361125 RCAN3Q9UKA8 241 aa26.85■■□□□ 1.89
SMURF1-201ENST00000361125 HSCBQ8IWL3 235 aa26.84■■□□□ 1.89
SMURF1-201ENST00000361125 WASHC2CQ9Y4E1 1318 aa26.84■■□□□ 1.89
SMURF1-201ENST00000361125 CSB-PGBD3P0DP91 1061 aa26.82■■□□□ 1.88
SMURF1-201ENST00000361125 DNTTIP2Q5QJE6 756 aaKnown RBP26.82■■□□□ 1.88
SMURF1-201ENST00000361125 ITPRIPQ8IWB1 547 aa26.82■■□□□ 1.88
SMURF1-201ENST00000361125 CCDC146Q8IYE0 955 aa26.82■■□□□ 1.88
SMURF1-201ENST00000361125 FANCD2Q9BXW9 1451 aa26.8■■□□□ 1.88
SMURF1-201ENST00000361125 IPO8O15397 1037 aaKnown RBP26.79■■□□□ 1.88
SMURF1-201ENST00000361125 ZNF330Q9Y3S2 320 aaPredicted RBP26.76■■□□□ 1.87
SMURF1-201ENST00000361125 MCCP23508 829 aa26.74■■□□□ 1.87
SMURF1-201ENST00000361125 RSPH4AQ5TD94 716 aa26.73■■□□□ 1.87
SMURF1-201ENST00000361125 CALD1Q05682 793 aaKnown RBP26.73■■□□□ 1.87
SMURF1-201ENST00000361125 TRAK1Q9UPV9 953 aa26.73■■□□□ 1.87
SMURF1-201ENST00000361125 NUTM2FA1L443 756 aa26.72■■□□□ 1.87
SMURF1-201ENST00000361125 TERF2IPQ9NYB0 399 aa26.72■■□□□ 1.87
SMURF1-201ENST00000361125 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.72■■□□□ 1.871e-6■■■□□ 16.6
SMURF1-201ENST00000361125 TCERG1O14776 1098 aaKnown RBP26.7■■□□□ 1.86
SMURF1-201ENST00000361125 EID1Q9Y6B2 187 aa26.69■■□□□ 1.86
SMURF1-201ENST00000361125 RWDD1Q9H446 243 aaPredicted RBP26.67■■□□□ 1.86
SMURF1-201ENST00000361125 GOLGA6L4A6NEF3 574 aa26.66■■□□□ 1.86
SMURF1-201ENST00000361125 NAP1L5Q96NT1 182 aaPredicted RBP26.66■■□□□ 1.86
SMURF1-201ENST00000361125 SMC4Q9NTJ3 1288 aa26.66■■□□□ 1.86
SMURF1-201ENST00000361125 NGDNQ8NEJ9 315 aaKnown RBP26.66■■□□□ 1.86
SMURF1-201ENST00000361125 ST20-MTHFSA0A0A6YYL1 179 aa26.63■■□□□ 1.85
SMURF1-201ENST00000361125 CCDC144AA2RUR9 1427 aa26.63■■□□□ 1.85
SMURF1-201ENST00000361125 IPO9Q96P70 1041 aaKnown RBP26.63■■□□□ 1.85
SMURF1-201ENST00000361125 CLUAP1Q96AJ1 413 aa26.62■■□□□ 1.85
SMURF1-201ENST00000361125 LTV1Q96GA3 475 aaPredicted RBP26.62■■□□□ 1.85
SMURF1-201ENST00000361125 NLRP13Q86W25 1043 aa26.61■■□□□ 1.85
SMURF1-201ENST00000361125 PTPRGP23470 1445 aa26.61■■□□□ 1.85
SMURF1-201ENST00000361125 STK31Q9BXU1 1019 aa26.6■■□□□ 1.85
SMURF1-201ENST00000361125 PANK3Q9H999 370 aa26.6■■□□□ 1.85
SMURF1-201ENST00000361125 KIAA1211Q6ZU35 1233 aa26.59■■□□□ 1.85
SMURF1-201ENST00000361125 RRP7AQ9Y3A4 280 aaKnown RBP26.59■■□□□ 1.85
SMURF1-201ENST00000361125 AMPHP49418 695 aa26.58■■□□□ 1.85
SMURF1-201ENST00000361125 ISY1Q9ULR0 285 aaKnown RBP26.57■■□□□ 1.84
SMURF1-201ENST00000361125 SLC4A10Q6U841 1118 aa26.57■■□□□ 1.84
SMURF1-201ENST00000361125 CFAP44Q96MT7 982 aa26.57■■□□□ 1.84
SMURF1-201ENST00000361125 CCDC9Q9Y3X0 531 aaKnown RBP26.57■■□□□ 1.84
SMURF1-201ENST00000361125 GOLGA6L6A8MZA4 724 aa26.56■■□□□ 1.84
SMURF1-201ENST00000361125 KIF15Q9NS87 1388 aa26.56■■□□□ 1.84
SMURF1-201ENST00000361125 PMFBP1Q8TBY8 1022 aa26.55■■□□□ 1.84
SMURF1-201ENST00000361125 CHMP3Q9Y3E7 222 aa26.55■■□□□ 1.84
SMURF1-201ENST00000361125 FGD5Q6ZNL6 1462 aa26.54■■□□□ 1.84
SMURF1-201ENST00000361125 RAD54L2Q9Y4B4 1467 aa26.54■■□□□ 1.84
SMURF1-201ENST00000361125 L1TD1Q5T7N2 865 aaKnown RBP26.54■■□□□ 1.84
SMURF1-201ENST00000361125 CENPJQ9HC77 1338 aaPredicted RBP26.54■■□□□ 1.84
SMURF1-201ENST00000361125 MFAP1P55081 439 aaKnown RBP26.53■■□□□ 1.84
SMURF1-201ENST00000361125 MYBBP1AQ9BQG0 1328 aaKnown RBP26.52■■□□□ 1.84
SMURF1-201ENST00000361125 KIF21BO75037 1637 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms