RNA–Protein interactions for RNA: ENST00000360382.4

SDHAF3-201, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 2 BASIC

Gene SDHAF3, Length 731 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-201ENST00000360382 SCRIBQ14160 1630 aa12.36□□□□□ -0.43
SDHAF3-201ENST00000360382 UNC13AQ9UPW8 1703 aa12.35□□□□□ -0.43
SDHAF3-201ENST00000360382 TMEM121BQ9BXQ6 578 aaPredicted RBP12.33□□□□□ -0.44
SDHAF3-201ENST00000360382 BICRAQ9NZM4 1560 aa12.31□□□□□ -0.44
SDHAF3-201ENST00000360382 SNPHO15079 494 aa12.29□□□□□ -0.44
SDHAF3-201ENST00000360382 AMER1Q5JTC6 1135 aaPredicted RBP12.28□□□□□ -0.44
SDHAF3-201ENST00000360382 MMRN1Q13201 1228 aa12.26□□□□□ -0.45
SDHAF3-201ENST00000360382 ST18O60284 1047 aa12.25□□□□□ -0.45
SDHAF3-201ENST00000360382 RTN4Q9NQC3 1192 aaKnown RBP12.25□□□□□ -0.45
SDHAF3-201ENST00000360382 PPP1R37O75864 691 aa12.23□□□□□ -0.45
SDHAF3-201ENST00000360382 TMEM92Q6UXU6 159 aa12.23□□□□□ -0.45
SDHAF3-201ENST00000360382 NKX1-1Q15270 411 aaPredicted RBP12.22□□□□□ -0.45
SDHAF3-201ENST00000360382 SPNS2Q8IVW8 549 aa12.22□□□□□ -0.45
SDHAF3-201ENST00000360382 SHROOM4Q9ULL8 1493 aa12.2□□□□□ -0.46
SDHAF3-201ENST00000360382 DNAJC5Q9H3Z4 198 aa12.16□□□□□ -0.46
SDHAF3-201ENST00000360382 ZNF710Q8N1W2 664 aa12.15□□□□□ -0.46
SDHAF3-201ENST00000360382 MARVELD3Q96A59 401 aa12.15□□□□□ -0.46
SDHAF3-201ENST00000360382 RYDENQ9NUL5 291 aaKnown RBP12.15□□□□□ -0.46
SDHAF3-201ENST00000360382 HOXB3P14651 431 aaPredicted RBP12.13□□□□□ -0.47
SDHAF3-201ENST00000360382 DOK7Q18PE1 504 aa12.13□□□□□ -0.47
SDHAF3-201ENST00000360382 TMC2Q8TDI7 906 aa12.12□□□□□ -0.47
SDHAF3-201ENST00000360382 C2orf72A6NCS6 295 aa12.11□□□□□ -0.47
SDHAF3-201ENST00000360382 RIMBP2O15034 1052 aa12.1□□□□□ -0.47
SDHAF3-201ENST00000360382 EMP3P54852 163 aa12.08□□□□□ -0.48
SDHAF3-201ENST00000360382 GTPBP6O43824 516 aaPredicted RBP12.07□□□□□ -0.48
SDHAF3-201ENST00000360382 KIF3CO14782 793 aa12.05□□□□□ -0.48
SDHAF3-201ENST00000360382 FAM205CA6NFA0 338 aa12.01□□□□□ -0.49
SDHAF3-201ENST00000360382 HOXB1P14653 301 aaPredicted RBP12□□□□□ -0.49
SDHAF3-201ENST00000360382 BBXQ8WY36 941 aaPredicted RBP11.99□□□□□ -0.49
SDHAF3-201ENST00000360382 EIF4G1Q04637 1599 aaKnown RBP11.98□□□□□ -0.49
SDHAF3-201ENST00000360382 ARSIQ5FYB1 569 aa11.97□□□□□ -0.49
SDHAF3-201ENST00000360382 ZSWIM6Q9HCJ5 1215 aa11.97□□□□□ -0.49
SDHAF3-201ENST00000360382 HS3ST6Q96QI5 342 aa11.96□□□□□ -0.49
SDHAF3-201ENST00000360382 GPHNQ9NQX3 736 aaPredicted RBP11.96□□□□□ -0.49
SDHAF3-201ENST00000360382 ERBB3P21860 1342 aa11.95□□□□□ -0.5
SDHAF3-201ENST00000360382 GPR153Q6NV75 609 aa11.94□□□□□ -0.5
SDHAF3-201ENST00000360382 PLPP6Q8IY26 295 aa11.94□□□□□ -0.5
SDHAF3-201ENST00000360382 KHSRPQ92945 711 aaKnown RBP eCLIP11.94□□□□□ -0.55e-7■■□□□ 13.3
SDHAF3-201ENST00000360382 DSG2Q14126 1118 aa11.93□□□□□ -0.5
SDHAF3-201ENST00000360382 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.93□□□□□ -0.5
SDHAF3-201ENST00000360382 CECR2Q9BXF3 1484 aa11.93□□□□□ -0.5
SDHAF3-201ENST00000360382 FOXK1P85037 733 aa11.92□□□□□ -0.5
SDHAF3-201ENST00000360382 POTEB3A0JP26 581 aa11.9□□□□□ -0.5
SDHAF3-201ENST00000360382 POTEBQ6S5H4 581 aa11.9□□□□□ -0.5
SDHAF3-201ENST00000360382 CC2D2AQ9P2K1 1620 aa11.89□□□□□ -0.51
SDHAF3-201ENST00000360382 VARS2Q5ST30 1063 aaKnown RBP11.89□□□□□ -0.51
SDHAF3-201ENST00000360382 CRISPLD2Q9H0B8 497 aa11.89□□□□□ -0.51
SDHAF3-201ENST00000360382 PCDHGA4Q9Y5G9 962 aa11.89□□□□□ -0.51
SDHAF3-201ENST00000360382 NUDT7P0C024 238 aa11.88□□□□□ -0.51
SDHAF3-201ENST00000360382 NCKAP5LQ9HCH0 1330 aa11.87□□□□□ -0.51
SDHAF3-201ENST00000360382 PDE4AP27815 886 aa11.87□□□□□ -0.51
SDHAF3-201ENST00000360382 SPRYD3Q8NCJ5 442 aa11.87□□□□□ -0.51
SDHAF3-201ENST00000360382 SLC34A2O95436 690 aa11.86□□□□□ -0.51
SDHAF3-201ENST00000360382 PPP1R15BQ5SWA1 713 aa11.86□□□□□ -0.51
SDHAF3-201ENST00000360382 CFAP44Q96MT7 982 aa11.86□□□□□ -0.51
SDHAF3-201ENST00000360382 LARP6Q9BRS8 491 aaKnown RBP11.86□□□□□ -0.51
SDHAF3-201ENST00000360382 PAXIP1Q6ZW49 1069 aaPredicted RBP11.85□□□□□ -0.51
SDHAF3-201ENST00000360382 KRTAP3-3Q9BYR6 98 aa11.85□□□□□ -0.51
SDHAF3-201ENST00000360382 KRTAP3-2Q9BYR7 98 aa11.85□□□□□ -0.51
SDHAF3-201ENST00000360382 BAZ1AQ9NRL2 1556 aaPredicted RBP11.84□□□□□ -0.51
SDHAF3-201ENST00000360382 CADPS2Q86UW7 1296 aa11.84□□□□□ -0.51
SDHAF3-201ENST00000360382 SMARCA4P51532 1647 aa11.83□□□□□ -0.52
SDHAF3-201ENST00000360382 UPF1Q92900 1129 aaKnown RBP eCLIP11.82□□□□□ -0.52
SDHAF3-201ENST00000360382 DDX27Q96GQ7 796 aaKnown RBP11.81□□□□□ -0.52
SDHAF3-201ENST00000360382 MROH2BQ7Z745 1585 aa11.8□□□□□ -0.52
SDHAF3-201ENST00000360382 ZNF316A6NFI3 1004 aaPredicted RBP11.8□□□□□ -0.52
SDHAF3-201ENST00000360382 PTCD2Q8WV60 388 aaKnown RBP11.8□□□□□ -0.52
SDHAF3-201ENST00000360382 ATAD2BQ9ULI0 1458 aa11.78□□□□□ -0.52
SDHAF3-201ENST00000360382 TBC1D12O60347 775 aa11.78□□□□□ -0.52
SDHAF3-201ENST00000360382 LHX6Q9UPM6 363 aa11.78□□□□□ -0.52
SDHAF3-201ENST00000360382 NCAPD3P42695 1498 aa11.76□□□□□ -0.53
SDHAF3-201ENST00000360382 SMARCA2P51531 1590 aa11.75□□□□□ -0.53
SDHAF3-201ENST00000360382 MFSD10Q14728 455 aa11.74□□□□□ -0.53
SDHAF3-201ENST00000360382 ZNF687Q8N1G0 1237 aa11.73□□□□□ -0.53
SDHAF3-201ENST00000360382 OXER1Q8TDS5 423 aa11.73□□□□□ -0.53
SDHAF3-201ENST00000360382 PEG3Q9GZU2 1588 aa11.73□□□□□ -0.53
SDHAF3-201ENST00000360382 RSF1Q96T23 1441 aaPredicted RBP11.72□□□□□ -0.53
SDHAF3-201ENST00000360382 HMGXB3Q12766 1538 aa11.69□□□□□ -0.54
SDHAF3-201ENST00000360382 KDM4FA0A1W2PPD8 638 aa11.68□□□□□ -0.54
SDHAF3-201ENST00000360382 BAZ1BQ9UIG0 1483 aaKnown RBP11.67□□□□□ -0.54
SDHAF3-201ENST00000360382 MAP3K9P80192 1104 aa11.66□□□□□ -0.54
SDHAF3-201ENST00000360382 WIZO95785 1651 aa11.65□□□□□ -0.54
SDHAF3-201ENST00000360382 PSDA5PKW4 1024 aaPredicted RBP11.65□□□□□ -0.54
SDHAF3-201ENST00000360382 EMILIN3Q9NT22 766 aa11.65□□□□□ -0.54
SDHAF3-201ENST00000360382 AXIN2Q9Y2T1 843 aa11.64□□□□□ -0.55
SDHAF3-201ENST00000360382 EVI5O60447 810 aa11.63□□□□□ -0.55
SDHAF3-201ENST00000360382 PPP4R3BQ5MIZ7 849 aa11.63□□□□□ -0.55
SDHAF3-201ENST00000360382 ANKRD13DQ6ZTN6 518 aa11.62□□□□□ -0.55
SDHAF3-201ENST00000360382 ZNF454Q8N9F8 522 aa11.61□□□□□ -0.55
SDHAF3-201ENST00000360382 PBX2P40425 430 aa11.6□□□□□ -0.55
SDHAF3-201ENST00000360382 WDR70Q9NW82 654 aa11.6□□□□□ -0.55
SDHAF3-201ENST00000360382 LSM11P83369 360 aaKnown RBP eCLIP11.59□□□□□ -0.55
SDHAF3-201ENST00000360382 POTEEQ6S8J3 1075 aa11.58□□□□□ -0.56
SDHAF3-201ENST00000360382 DPYSL4O14531 572 aa11.57□□□□□ -0.56
SDHAF3-201ENST00000360382 CAMK2BQ13554 666 aa11.57□□□□□ -0.56
SDHAF3-201ENST00000360382 TSHZ2Q9NRE2 1034 aa11.56□□□□□ -0.56
SDHAF3-201ENST00000360382 TOP2AP11388 1531 aaKnown RBP11.55□□□□□ -0.56
SDHAF3-201ENST00000360382 ARHGAP33O14559 1287 aa11.55□□□□□ -0.56
SDHAF3-201ENST00000360382 PSEN2P49810 448 aa11.54□□□□□ -0.56
SDHAF3-201ENST00000360382 KCNH8Q96L42 1107 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms