RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 NCOA2Q15596 1464 aa14.82□□□□□ -0.04
SEPSECS-201ENST00000358971 GZF1Q9H116 711 aaPredicted RBP14.82□□□□□ -0.04
SEPSECS-201ENST00000358971 ESPNB1AK53 854 aa14.81□□□□□ -0.04
SEPSECS-201ENST00000358971 SLKQ9H2G2 1235 aaPredicted RBP14.81□□□□□ -0.04
SEPSECS-201ENST00000358971 CCDC7Q96M83 1385 aa14.81□□□□□ -0.04
SEPSECS-201ENST00000358971 BBXQ8WY36 941 aaPredicted RBP14.81□□□□□ -0.04
SEPSECS-201ENST00000358971 SYNJ1O43426 1573 aa14.8□□□□□ -0.04
SEPSECS-201ENST00000358971 FAM161AQ3B820 660 aa14.8□□□□□ -0.04
SEPSECS-201ENST00000358971 TRIM44Q96DX7 344 aaPredicted RBP14.77□□□□□ -0.04
SEPSECS-201ENST00000358971 MYH16Q9H6N6 1097 aa14.77□□□□□ -0.04
SEPSECS-201ENST00000358971 POLR3GLQ9BT43 218 aa14.76□□□□□ -0.05
SEPSECS-201ENST00000358971 ZHX1Q9UKY1 873 aaPredicted RBP14.76□□□□□ -0.05
SEPSECS-201ENST00000358971 KIAA1211Q6ZU35 1233 aa14.76□□□□□ -0.05
SEPSECS-201ENST00000358971 PLIN1O60240 522 aa14.76□□□□□ -0.05
SEPSECS-201ENST00000358971 TMC1Q8TDI8 760 aa14.76□□□□□ -0.05
SEPSECS-201ENST00000358971 PHLDB1Q86UU1 1377 aa14.75□□□□□ -0.05
SEPSECS-201ENST00000358971 ARID3AQ99856 593 aa14.74□□□□□ -0.05
SEPSECS-201ENST00000358971 C8orf34Q49A92 452 aa14.74□□□□□ -0.05
SEPSECS-201ENST00000358971 ERBB4Q15303 1308 aa14.73□□□□□ -0.05
SEPSECS-201ENST00000358971 FAM13BQ9NYF5 915 aa14.73□□□□□ -0.05
SEPSECS-201ENST00000358971 CRBNQ96SW2 442 aa14.73□□□□□ -0.05
SEPSECS-201ENST00000358971 FSD2A1L4K1 749 aa14.72□□□□□ -0.05
SEPSECS-201ENST00000358971 BECN1Q14457 450 aa14.72□□□□□ -0.05
SEPSECS-201ENST00000358971 NAP1L2Q9ULW6 460 aaPredicted RBP14.72□□□□□ -0.05
SEPSECS-201ENST00000358971 NCOA1Q15788 1441 aa14.72□□□□□ -0.05
SEPSECS-201ENST00000358971 MRE11P49959 708 aa14.71□□□□□ -0.05
SEPSECS-201ENST00000358971 ERICH3Q5RHP9 1530 aa14.71□□□□□ -0.05
SEPSECS-201ENST00000358971 CANXP27824 592 aaKnown RBP14.7□□□□□ -0.06
SEPSECS-201ENST00000358971 AEBP2Q6ZN18 517 aaPredicted RBP14.7□□□□□ -0.06
SEPSECS-201ENST00000358971 PNISRQ8TF01 805 aaKnown RBP14.7□□□□□ -0.06
SEPSECS-201ENST00000358971 KIF7Q2M1P5 1343 aa14.7□□□□□ -0.06
SEPSECS-201ENST00000358971 CHMP4BQ9H444 224 aaKnown RBP14.7□□□□□ -0.06
SEPSECS-201ENST00000358971 KTN1Q86UP2 1357 aaKnown RBP14.69□□□□□ -0.06
SEPSECS-201ENST00000358971 PRDM10Q9NQV6 1147 aa14.69□□□□□ -0.06
SEPSECS-201ENST00000358971 MAP3K1Q13233 1512 aa14.68□□□□□ -0.06
SEPSECS-201ENST00000358971 SMAP1Q8IYB5 467 aaPredicted RBP14.68□□□□□ -0.06
SEPSECS-201ENST00000358971 MAP7D2Q96T17 732 aa14.68□□□□□ -0.06
SEPSECS-201ENST00000358971 ATP1B4Q9UN42 357 aaPredicted RBP14.68□□□□□ -0.06
SEPSECS-201ENST00000358971 GTF2E1P29083 439 aaPredicted RBP14.67□□□□□ -0.06
SEPSECS-201ENST00000358971 GRPEL1Q9HAV7 217 aa14.66□□□□□ -0.06
SEPSECS-201ENST00000358971 CCDC18Q5T9S5 1454 aa14.65□□□□□ -0.06
SEPSECS-201ENST00000358971 TAF7LQ5H9L4 462 aa14.65□□□□□ -0.06
SEPSECS-201ENST00000358971 CENPQQ7L2Z9 268 aaPredicted RBP14.65□□□□□ -0.06
SEPSECS-201ENST00000358971 NCLP19338 710 aaKnown RBP14.64□□□□□ -0.07
SEPSECS-201ENST00000358971 UACAQ9BZF9 1416 aa14.64□□□□□ -0.07
SEPSECS-201ENST00000358971 KDM5BQ9UGL1 1544 aa14.64□□□□□ -0.07
SEPSECS-201ENST00000358971 RIPK4P57078 832 aa14.64□□□□□ -0.07
SEPSECS-201ENST00000358971 STAC3Q96MF2 364 aa14.63□□□□□ -0.07
SEPSECS-201ENST00000358971 ARHGAP35Q9NRY4 1499 aa14.62□□□□□ -0.07
SEPSECS-201ENST00000358971 TRAK2O60296 914 aa14.62□□□□□ -0.07
SEPSECS-201ENST00000358971 MCM4P33991 863 aa14.62□□□□□ -0.07
SEPSECS-201ENST00000358971 LRRC9Q6ZRR7 1453 aa14.62□□□□□ -0.07
SEPSECS-201ENST00000358971 SPRYD3Q8NCJ5 442 aa14.62□□□□□ -0.07
SEPSECS-201ENST00000358971 TIAM1Q13009 1591 aa14.61□□□□□ -0.07
SEPSECS-201ENST00000358971 CDCA7LQ96GN5 454 aa14.61□□□□□ -0.07
SEPSECS-201ENST00000358971 L3MBTL2Q969R5 705 aa14.61□□□□□ -0.07
SEPSECS-201ENST00000358971 KDM2BQ8NHM5 1336 aa14.6□□□□□ -0.07
SEPSECS-201ENST00000358971 PRXQ9BXM0 1461 aa14.59□□□□□ -0.07
SEPSECS-201ENST00000358971 TNNT2P45379 298 aaPredicted RBP14.59□□□□□ -0.07
SEPSECS-201ENST00000358971 C20orf194Q5TEA3 1177 aa14.59□□□□□ -0.07
SEPSECS-201ENST00000358971 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.59□□□□□ -0.07
SEPSECS-201ENST00000358971 R3HCC1Q9Y3T6 440 aaKnown RBP14.59□□□□□ -0.07
SEPSECS-201ENST00000358971 PDE3BQ13370 1112 aa14.58□□□□□ -0.07
SEPSECS-201ENST00000358971 ANTXR1Q9H6X2 564 aa14.58□□□□□ -0.07
SEPSECS-201ENST00000358971 OFD1O75665 1012 aa14.58□□□□□ -0.08
SEPSECS-201ENST00000358971 DHX29Q7Z478 1369 aaKnown RBP14.57□□□□□ -0.08
SEPSECS-201ENST00000358971 MSNP26038 577 aaKnown RBP14.57□□□□□ -0.08
SEPSECS-201ENST00000358971 PAXIP1Q6ZW49 1069 aaPredicted RBP14.57□□□□□ -0.08
SEPSECS-201ENST00000358971 ANP32BQ92688 251 aaKnown RBP14.56□□□□□ -0.08
SEPSECS-201ENST00000358971 USP19O94966 1318 aa14.55□□□□□ -0.08
SEPSECS-201ENST00000358971 DMTNQ08495 405 aa14.54□□□□□ -0.08
SEPSECS-201ENST00000358971 IPO4Q8TEX9 1081 aaKnown RBP14.54□□□□□ -0.08
SEPSECS-201ENST00000358971 MTERF4Q7Z6M4 381 aaKnown RBP14.54□□□□□ -0.08
SEPSECS-201ENST00000358971 AQRO60306 1485 aaKnown RBP eCLIP14.53□□□□□ -0.08
SEPSECS-201ENST00000358971 SEC24BO95487 1268 aa14.53□□□□□ -0.08
SEPSECS-201ENST00000358971 PPP4R3BQ5MIZ7 849 aa14.53□□□□□ -0.08
SEPSECS-201ENST00000358971 UTP14CQ5TAP6 766 aaKnown RBP14.53□□□□□ -0.08
SEPSECS-201ENST00000358971 ZSCAN30Q86W11 494 aa14.53□□□□□ -0.08
SEPSECS-201ENST00000358971 UQCRHLA0A096LP55 91 aa14.53□□□□□ -0.08
SEPSECS-201ENST00000358971 UQCRHP07919 91 aa14.53□□□□□ -0.08
SEPSECS-201ENST00000358971 ISY1Q9ULR0 285 aaKnown RBP14.53□□□□□ -0.08
SEPSECS-201ENST00000358971 TERF1P54274 439 aa14.52□□□□□ -0.08
SEPSECS-201ENST00000358971 NBPF8Q3BBV2 869 aa14.52□□□□□ -0.08
SEPSECS-201ENST00000358971 PLCD3Q8N3E9 789 aa14.51□□□□□ -0.09
SEPSECS-201ENST00000358971 LRPPRCP42704 1394 aaKnown RBP14.51□□□□□ -0.09
SEPSECS-201ENST00000358971 VGLL3A8MV65 326 aa14.51□□□□□ -0.09
SEPSECS-201ENST00000358971 TBC1D2Q9BYX2 928 aa14.51□□□□□ -0.09
SEPSECS-201ENST00000358971 UPF2Q9HAU5 1272 aaKnown RBP14.5□□□□□ -0.09
SEPSECS-201ENST00000358971 HFM1A2PYH4 1435 aa14.49□□□□□ -0.09
SEPSECS-201ENST00000358971 SMARCA4P51532 1647 aa14.49□□□□□ -0.09
SEPSECS-201ENST00000358971 AMER1Q5JTC6 1135 aaPredicted RBP14.48□□□□□ -0.09
SEPSECS-201ENST00000358971 FMN1Q68DA7 1419 aa14.48□□□□□ -0.09
SEPSECS-201ENST00000358971 ZSCAN20P17040 1043 aaPredicted RBP14.48□□□□□ -0.09
SEPSECS-201ENST00000358971 GAS2L3Q86XJ1 694 aa14.48□□□□□ -0.09
SEPSECS-201ENST00000358971 CHMP5Q9NZZ3 219 aa14.48□□□□□ -0.09
SEPSECS-201ENST00000358971 DDX11L8A8MPP1 907 aa14.47□□□□□ -0.09
SEPSECS-201ENST00000358971 CCDC173Q0VFZ6 552 aa14.47□□□□□ -0.09
SEPSECS-201ENST00000358971 FOXD1Q16676 465 aa14.47□□□□□ -0.09
SEPSECS-201ENST00000358971 TMEM51Q9NW97 253 aa14.47□□□□□ -0.09
SEPSECS-201ENST00000358971 ABCA5Q8WWZ7 1642 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms