RNA–Protein interactions for RNA: ENST00000358791.9

BCAS4-201, Transcript of breast carcinoma amplified sequence 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BCAS4, Length 1,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4-201ENST00000358791 CDK11AQ9UQ88 783 aaPredicted RBP23.49■■□□□ 1.35
BCAS4-201ENST00000358791 MYO5CQ9NQX4 1742 aa23.48■■□□□ 1.35
BCAS4-201ENST00000358791 SCAPERQ9BY12 1400 aa23.48■■□□□ 1.35
BCAS4-201ENST00000358791 KIF14Q15058 1648 aa23.48■■□□□ 1.35
BCAS4-201ENST00000358791 POGZQ7Z3K3 1410 aa23.47■■□□□ 1.35
BCAS4-201ENST00000358791 LRRIQ1Q96JM4 1722 aa23.47■■□□□ 1.35
BCAS4-201ENST00000358791 MAGI2Q86UL8 1455 aa23.46■■□□□ 1.35
BCAS4-201ENST00000358791 TROQ12816 1431 aaPredicted RBP23.45■■□□□ 1.35
BCAS4-201ENST00000358791 SIGLEC1Q9BZZ2 1709 aa23.45■■□□□ 1.35
BCAS4-201ENST00000358791 RIMS1Q86UR5 1692 aaKnown RBP23.45■■□□□ 1.34
BCAS4-201ENST00000358791 EFCAB2Q5VUJ9 269 aa23.43■■□□□ 1.34
BCAS4-201ENST00000358791 CLIP1P30622 1438 aa23.41■■□□□ 1.34
BCAS4-201ENST00000358791 PCF11O94913 1555 aaKnown RBP23.39■■□□□ 1.33
BCAS4-201ENST00000358791 ARHGAP5Q13017 1502 aa23.38■■□□□ 1.33
BCAS4-201ENST00000358791 CASKIN1Q8WXD9 1431 aa23.36■■□□□ 1.33
BCAS4-201ENST00000358791 LMTK3Q96Q04 1460 aa23.36■■□□□ 1.33
BCAS4-201ENST00000358791 CCDC18Q5T9S5 1454 aa23.34■■□□□ 1.33
BCAS4-201ENST00000358791 MLECQ14165 292 aa23.34■■□□□ 1.33
BCAS4-201ENST00000358791 ATP10AO60312 1499 aa23.33■■□□□ 1.33
BCAS4-201ENST00000358791 ZNF518AQ6AHZ1 1483 aa23.33■■□□□ 1.33
BCAS4-201ENST00000358791 C9orf84Q5VXU9 1444 aa23.32■■□□□ 1.32
BCAS4-201ENST00000358791 FER1L4A9Z1Z3 1794 aa23.32■■□□□ 1.32
BCAS4-201ENST00000358791 CDC42BPBQ9Y5S2 1711 aa23.32■■□□□ 1.32
BCAS4-201ENST00000358791 KDM5CP41229 1560 aa23.32■■□□□ 1.32
BCAS4-201ENST00000358791 AFAP1Q8N556 730 aa23.29■■□□□ 1.32
BCAS4-201ENST00000358791 PREX2Q70Z35 1606 aa23.29■■□□□ 1.32
BCAS4-201ENST00000358791 FYCO1Q9BQS8 1478 aa23.28■■□□□ 1.32
BCAS4-201ENST00000358791 ARHGEF12Q9NZN5 1544 aa23.27■■□□□ 1.32
BCAS4-201ENST00000358791 ABCC1P33527 1531 aa23.23■■□□□ 1.31
BCAS4-201ENST00000358791 DIP2CQ9Y2E4 1556 aa23.23■■□□□ 1.31
BCAS4-201ENST00000358791 MYT1LQ9UL68 1186 aa23.23■■□□□ 1.31
BCAS4-201ENST00000358791 CDC42BPAQ5VT25 1732 aa23.22■■□□□ 1.31
BCAS4-201ENST00000358791 HSPA2P54652 639 aa23.22■■□□□ 1.31
BCAS4-201ENST00000358791 ITSN2Q9NZM3 1697 aa23.21■■□□□ 1.31
BCAS4-201ENST00000358791 TRAPPC8Q9Y2L5 1435 aa23.21■■□□□ 1.31
BCAS4-201ENST00000358791 MLH3Q9UHC1 1453 aa23.2■■□□□ 1.31
BCAS4-201ENST00000358791 ABCA6Q8N139 1617 aa23.2■■□□□ 1.3
BCAS4-201ENST00000358791 REREQ9P2R6 1566 aa23.19■■□□□ 1.3
BCAS4-201ENST00000358791 CEBPAP49715 358 aaPredicted RBP23.14■■□□□ 1.3
BCAS4-201ENST00000358791 FBXO41Q8TF61 875 aa23.14■■□□□ 1.3
BCAS4-201ENST00000358791 PREX1Q8TCU6 1659 aa23.12■■□□□ 1.29
BCAS4-201ENST00000358791 SAMD9LQ8IVG5 1584 aa23.12■■□□□ 1.29
BCAS4-201ENST00000358791 KIDINS220Q9ULH0 1771 aa23.12■■□□□ 1.29
BCAS4-201ENST00000358791 GPATCH8Q9UKJ3 1502 aaKnown RBP23.12■■□□□ 1.29
BCAS4-201ENST00000358791 ZNF777Q9ULD5 760 aaPredicted RBP23.12■■□□□ 1.29
BCAS4-201ENST00000358791 AGLP35573 1532 aa23.11■■□□□ 1.29
BCAS4-201ENST00000358791 SYCP2Q9BX26 1530 aa23.1■■□□□ 1.29
BCAS4-201ENST00000358791 MTUS2Q5JR59 1369 aa23.05■■□□□ 1.28
BCAS4-201ENST00000358791 C3P01024 1663 aa23.04■■□□□ 1.28
BCAS4-201ENST00000358791 CCNB3Q8WWL7 1395 aa23.04■■□□□ 1.28
BCAS4-201ENST00000358791 HNRNPMP52272 730 aaKnown RBP eCLIP23.03■■□□□ 1.28
BCAS4-201ENST00000358791 CFDP1Q9UEE9 299 aaPredicted RBP23.03■■□□□ 1.28
BCAS4-201ENST00000358791 UHRF1BP1Q6BDS2 1440 aa23.03■■□□□ 1.28
BCAS4-201ENST00000358791 SETD1BQ9UPS6 1966 aaKnown RBP23.02■■□□□ 1.28
BCAS4-201ENST00000358791 ESF1Q9H501 851 aaKnown RBP23.01■■□□□ 1.27
BCAS4-201ENST00000358791 KIAA1107Q9UPP5 1409 aa23.01■■□□□ 1.27
BCAS4-201ENST00000358791 PLEKHH2Q8IVE3 1493 aa23.01■■□□□ 1.27
BCAS4-201ENST00000358791 SPAG9O60271 1321 aaKnown RBP23.01■■□□□ 1.27
BCAS4-201ENST00000358791 CEP162Q5TB80 1403 aa23■■□□□ 1.27
BCAS4-201ENST00000358791 ATP7AQ04656 1500 aa22.99■■□□□ 1.27
BCAS4-201ENST00000358791 EHBP1L1Q8N3D4 1523 aa22.98■■□□□ 1.27
BCAS4-201ENST00000358791 TIAM1Q13009 1591 aa22.98■■□□□ 1.27
BCAS4-201ENST00000358791 INO80Q9ULG1 1556 aaPredicted RBP22.98■■□□□ 1.27
BCAS4-201ENST00000358791 CNTLNQ9NXG0 1405 aa22.97■■□□□ 1.27
BCAS4-201ENST00000358791 SUPT6HQ7KZ85 1726 aaKnown RBP22.96■■□□□ 1.27
BCAS4-201ENST00000358791 STRCQ7RTU9 1775 aa22.96■■□□□ 1.27
BCAS4-201ENST00000358791 PLXNC1O60486 1568 aa22.93■■□□□ 1.26
BCAS4-201ENST00000358791 ZNF644Q9H582 1327 aaPredicted RBP22.92■■□□□ 1.26
BCAS4-201ENST00000358791 CERKQ8TCT0 537 aa22.92■■□□□ 1.26
BCAS4-201ENST00000358791 MROH2AA6NES4 1674 aa22.92■■□□□ 1.26
BCAS4-201ENST00000358791 A2MP01023 1474 aa22.92■■□□□ 1.26
BCAS4-201ENST00000358791 DMRT2Q9Y5R5 561 aa22.89■■□□□ 1.26
BCAS4-201ENST00000358791 MBD5Q9P267 1494 aa22.88■■□□□ 1.25
BCAS4-201ENST00000358791 ZMYM3Q14202 1370 aa22.87■■□□□ 1.25
BCAS4-201ENST00000358791 NPATQ14207 1427 aa22.87■■□□□ 1.25
BCAS4-201ENST00000358791 ADGBQ8N7X0 1667 aa22.86■■□□□ 1.25
BCAS4-201ENST00000358791 CLTCQ00610 1675 aaKnown RBP22.85■■□□□ 1.25
BCAS4-201ENST00000358791 NCOA2Q15596 1464 aa22.84■■□□□ 1.25
BCAS4-201ENST00000358791 GGT6Q6P531 493 aa22.83■■□□□ 1.25
BCAS4-201ENST00000358791 PTPRTO14522 1441 aa22.82■■□□□ 1.24
BCAS4-201ENST00000358791 RTEL1-TNFRSF6BF6WH68 1400 aa22.82■■□□□ 1.24
BCAS4-201ENST00000358791 NCOA1Q15788 1441 aa22.81■■□□□ 1.24
BCAS4-201ENST00000358791 ADRA2BP18089 450 aa22.79■■□□□ 1.24
BCAS4-201ENST00000358791 CAMSAP2Q08AD1 1489 aa22.79■■□□□ 1.24
BCAS4-201ENST00000358791 CCDC141Q6ZP82 1450 aa22.78■■□□□ 1.24
BCAS4-201ENST00000358791 CAMSAP1Q5T5Y3 1602 aa22.77■■□□□ 1.24
BCAS4-201ENST00000358791 PTPRKQ15262 1439 aa22.77■■□□□ 1.24
BCAS4-201ENST00000358791 MYO3AQ8NEV4 1616 aa22.77■■□□□ 1.23
BCAS4-201ENST00000358791 LOC105371045A0A1W2PR82 267 aa22.76■■□□□ 1.23
BCAS4-201ENST00000358791 DHX29Q7Z478 1369 aaKnown RBP22.76■■□□□ 1.23
BCAS4-201ENST00000358791 VPS8Q8N3P4 1428 aa22.76■■□□□ 1.23
BCAS4-201ENST00000358791 PPP6R1Q9UPN7 881 aa22.76■■□□□ 1.23
BCAS4-201ENST00000358791 ZNF142P52746 1687 aaPredicted RBP22.74■■□□□ 1.23
BCAS4-201ENST00000358791 LRRC9Q6ZRR7 1453 aa22.72■■□□□ 1.23
BCAS4-201ENST00000358791 CEP170BQ9Y4F5 1589 aaPredicted RBP22.71■■□□□ 1.23
BCAS4-201ENST00000358791 RSPH4AQ5TD94 716 aa22.71■■□□□ 1.23
BCAS4-201ENST00000358791 ARHGEF5Q12774 1597 aa22.7■■□□□ 1.22
BCAS4-201ENST00000358791 LTBP4Q8N2S1 1624 aa22.7■■□□□ 1.22
BCAS4-201ENST00000358791 KIF3BO15066 747 aa22.69■■□□□ 1.22
BCAS4-201ENST00000358791 NCKAP5LQ9HCH0 1330 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms