RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 PAK3O75914 559 aaPredicted RBP15.26■□□□□ 0.03
PSEN1-202ENST00000357710 IPO9Q96P70 1041 aaKnown RBP15.26■□□□□ 0.03
PSEN1-202ENST00000357710 CASKIN1Q8WXD9 1431 aa15.25■□□□□ 0.03
PSEN1-202ENST00000357710 CARMIL2Q6F5E8 1435 aa15.24■□□□□ 0.03
PSEN1-202ENST00000357710 NEFMP07197 916 aa15.24■□□□□ 0.03
PSEN1-202ENST00000357710 ANP32AP39687 249 aaKnown RBP15.24■□□□□ 0.03
PSEN1-202ENST00000357710 CENPJQ9HC77 1338 aaPredicted RBP15.24■□□□□ 0.03
PSEN1-202ENST00000357710 MAP3K1Q13233 1512 aa15.23■□□□□ 0.03
PSEN1-202ENST00000357710 CFAP43Q8NDM7 1665 aa15.23■□□□□ 0.03
PSEN1-202ENST00000357710 CALD1Q05682 793 aaKnown RBP15.23■□□□□ 0.03
PSEN1-202ENST00000357710 TIAM1Q13009 1591 aa15.22■□□□□ 0.03
PSEN1-202ENST00000357710 ZBTB47Q9UFB7 747 aaPredicted RBP15.22■□□□□ 0.03
PSEN1-202ENST00000357710 BRPF3Q9ULD4 1205 aa15.22■□□□□ 0.03
PSEN1-202ENST00000357710 SHROOM2Q13796 1616 aa15.22■□□□□ 0.03
PSEN1-202ENST00000357710 CLASP1Q7Z460 1538 aa15.21■□□□□ 0.03
PSEN1-202ENST00000357710 JPH4Q96JJ6 628 aa15.21■□□□□ 0.03
PSEN1-202ENST00000357710 HECW1Q76N89 1606 aa15.2■□□□□ 0.02
PSEN1-202ENST00000357710 BRD2P25440 801 aaKnown RBP15.2■□□□□ 0.02
PSEN1-202ENST00000357710 HOMEZQ8IX15 550 aa15.19■□□□□ 0.02
PSEN1-202ENST00000357710 PPM1GO15355 546 aaPredicted RBP15.19■□□□□ 0.02
PSEN1-202ENST00000357710 HSP90AA1P07900 732 aaKnown RBP15.18■□□□□ 0.02
PSEN1-202ENST00000357710 PRG4Q92954 1404 aaPredicted RBP15.16■□□□□ 0.02
PSEN1-202ENST00000357710 CCDC18Q5T9S5 1454 aa15.15■□□□□ 0.02
PSEN1-202ENST00000357710 RAPGEF6Q8TEU7 1601 aa15.14■□□□□ 0.01
PSEN1-202ENST00000357710 GSE1Q14687 1217 aa15.14■□□□□ 0.01
PSEN1-202ENST00000357710 ATP1B4Q9UN42 357 aaPredicted RBP15.14■□□□□ 0.01
PSEN1-202ENST00000357710 LRRIQ1Q96JM4 1722 aa15.14■□□□□ 0.01
PSEN1-202ENST00000357710 PPP4R2Q9NY27 417 aa15.13■□□□□ 0.01
PSEN1-202ENST00000357710 NAP1L2Q9ULW6 460 aaPredicted RBP15.13■□□□□ 0.01
PSEN1-202ENST00000357710 IPO4Q8TEX9 1081 aaKnown RBP15.13■□□□□ 0.01
PSEN1-202ENST00000357710 NAP1L5Q96NT1 182 aaPredicted RBP15.13■□□□□ 0.01
PSEN1-202ENST00000357710 LRRC9Q6ZRR7 1453 aa15.12■□□□□ 0.01
PSEN1-202ENST00000357710 PRDM4Q9UKN5 801 aa15.11■□□□□ 0.01
PSEN1-202ENST00000357710 KANK4Q5T7N3 995 aaPredicted RBP15.1■□□□□ 0.01
PSEN1-202ENST00000357710 EPRSP07814 1512 aaKnown RBP15.09■□□□□ 0.01
PSEN1-202ENST00000357710 NCLP19338 710 aaKnown RBP15.08■□□□□ 0
PSEN1-202ENST00000357710 EHBP1L1Q8N3D4 1523 aa15.07■□□□□ 0
PSEN1-202ENST00000357710 ABCA8O94911 1581 aa15.07■□□□□ 0
PSEN1-202ENST00000357710 NUP153P49790 1475 aaKnown RBP15.07■□□□□ 0
PSEN1-202ENST00000357710 PLB1Q6P1J6 1458 aa15.06■□□□□ 0
PSEN1-202ENST00000357710 ERCC6L2Q5T890 1561 aa15.06■□□□□ 0
PSEN1-202ENST00000357710 PTPRGP23470 1445 aa15.05■□□□□ 0
PSEN1-202ENST00000357710 CDK13Q14004 1512 aaKnown RBP15.05■□□□□ -0
PSEN1-202ENST00000357710 MTUS2Q5JR59 1369 aa15.04■□□□□ -0
PSEN1-202ENST00000357710 CCER2I3L3R5 266 aa15.04■□□□□ -0
PSEN1-202ENST00000357710 OSCARQ8IYS5 282 aa15.04■□□□□ -0
PSEN1-202ENST00000357710 PAXIP1Q6ZW49 1069 aaPredicted RBP15.03■□□□□ -0
PSEN1-202ENST00000357710 BBXQ8WY36 941 aaPredicted RBP15.02■□□□□ -0
PSEN1-202ENST00000357710 SUPT6HQ7KZ85 1726 aaKnown RBP15.02■□□□□ -0
PSEN1-202ENST00000357710 CANXP27824 592 aaKnown RBP15.01□□□□□ -0.01
PSEN1-202ENST00000357710 PDCL3Q9H2J4 239 aa15.01□□□□□ -0.01
PSEN1-202ENST00000357710 MAGI3Q5TCQ9 1506 aa14.99□□□□□ -0.01
PSEN1-202ENST00000357710 CNGB1Q14028 1251 aaPredicted RBP14.99□□□□□ -0.01
PSEN1-202ENST00000357710 UACAQ9BZF9 1416 aa14.98□□□□□ -0.01
PSEN1-202ENST00000357710 RRBP1Q9P2E9 1410 aaKnown RBP14.98□□□□□ -0.01
PSEN1-202ENST00000357710 GTF2E1P29083 439 aaPredicted RBP14.98□□□□□ -0.01
PSEN1-202ENST00000357710 ABCC2Q92887 1545 aa14.97□□□□□ -0.01
PSEN1-202ENST00000357710 ARID3CA6NKF2 412 aa14.96□□□□□ -0.01
PSEN1-202ENST00000357710 CHMP4AQ9BY43 222 aa14.96□□□□□ -0.01
PSEN1-202ENST00000357710 NCOA2Q15596 1464 aa14.96□□□□□ -0.02
PSEN1-202ENST00000357710 PHLDB1Q86UU1 1377 aa14.95□□□□□ -0.02
PSEN1-202ENST00000357710 HNRNPUL2Q1KMD3 747 aaKnown RBP14.94□□□□□ -0.02
PSEN1-202ENST00000357710 ARHGEF11O15085 1522 aa14.94□□□□□ -0.02
PSEN1-202ENST00000357710 CCNB3Q8WWL7 1395 aa14.94□□□□□ -0.02
PSEN1-202ENST00000357710 UHRF1BP1LA0JNW5 1464 aa14.93□□□□□ -0.02
PSEN1-202ENST00000357710 ATP10BO94823 1461 aa14.93□□□□□ -0.02
PSEN1-202ENST00000357710 PNNQ9H307 717 aaKnown RBP14.92□□□□□ -0.02
PSEN1-202ENST00000357710 TROQ12816 1431 aaPredicted RBP14.92□□□□□ -0.02
PSEN1-202ENST00000357710 ADCY10Q96PN6 1610 aa14.92□□□□□ -0.02
PSEN1-202ENST00000357710 STAC3Q96MF2 364 aa14.92□□□□□ -0.02
PSEN1-202ENST00000357710 KCNH8Q96L42 1107 aa14.91□□□□□ -0.02
PSEN1-202ENST00000357710 TEX2Q8IWB9 1127 aa14.91□□□□□ -0.02
PSEN1-202ENST00000357710 BCCIPQ9P287 314 aaKnown RBP eCLIP14.91□□□□□ -0.02
PSEN1-202ENST00000357710 TPM2P07951 284 aa14.9□□□□□ -0.02
PSEN1-202ENST00000357710 CHMP4BQ9H444 224 aaKnown RBP14.9□□□□□ -0.02
PSEN1-202ENST00000357710 MYOM3Q5VTT5 1437 aa14.9□□□□□ -0.02
PSEN1-202ENST00000357710 ARID4BQ4LE39 1312 aaPredicted RBP14.9□□□□□ -0.02
PSEN1-202ENST00000357710 FRAT1Q92837 279 aaPredicted RBP14.89□□□□□ -0.03
PSEN1-202ENST00000357710 KIF14Q15058 1648 aa14.89□□□□□ -0.03
PSEN1-202ENST00000357710 CLCN1P35523 988 aa14.89□□□□□ -0.03
PSEN1-202ENST00000357710 PHF23Q9BUL5 403 aaPredicted RBP14.89□□□□□ -0.03
PSEN1-202ENST00000357710 FGD6Q6ZV73 1430 aa14.89□□□□□ -0.03
PSEN1-202ENST00000357710 FTSJ3Q8IY81 847 aaKnown RBP14.88□□□□□ -0.03
PSEN1-202ENST00000357710 RGS3P49796 1198 aa14.88□□□□□ -0.03
PSEN1-202ENST00000357710 CHRM1P11229 460 aaPredicted RBP14.87□□□□□ -0.03
PSEN1-202ENST00000357710 ZCCHC11Q5TAX3 1644 aaKnown RBP14.87□□□□□ -0.03
PSEN1-202ENST00000357710 SMAP1Q8IYB5 467 aaPredicted RBP14.87□□□□□ -0.03
PSEN1-202ENST00000357710 ITSN2Q9NZM3 1697 aa14.86□□□□□ -0.03
PSEN1-202ENST00000357710 RRAGDQ9NQL2 400 aaPredicted RBP14.86□□□□□ -0.03
PSEN1-202ENST00000357710 KDM5BQ9UGL1 1544 aa14.86□□□□□ -0.03
PSEN1-202ENST00000357710 PLEKHD1A6NEE1 506 aa14.85□□□□□ -0.03
PSEN1-202ENST00000357710 VGFO15240 615 aaPredicted RBP14.85□□□□□ -0.03
PSEN1-202ENST00000357710 NPM2Q86SE8 214 aaKnown RBP14.85□□□□□ -0.03
PSEN1-202ENST00000357710 MAP7D2Q96T17 732 aa14.85□□□□□ -0.03
PSEN1-202ENST00000357710 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.85□□□□□ -0.03
PSEN1-202ENST00000357710 DHX37Q8IY37 1157 aaKnown RBP14.84□□□□□ -0.03
PSEN1-202ENST00000357710 PTPN23Q9H3S7 1636 aa14.84□□□□□ -0.03
PSEN1-202ENST00000357710 TULP1O00294 542 aaPredicted RBP14.84□□□□□ -0.03
PSEN1-202ENST00000357710 MIA2Q96PC5 1412 aa14.83□□□□□ -0.04
PSEN1-202ENST00000357710 SAMD1Q6SPF0 538 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms