RNA–Protein interactions for RNA: ENST00000356534.7

CHRD-203, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 1,252 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-203ENST00000356534 ADGRL1O94910 1474 aa32.48■■■□□ 2.79
CHRD-203ENST00000356534 MTUS2Q5JR59 1369 aa32.45■■■□□ 2.78
CHRD-203ENST00000356534 EFCAB2Q5VUJ9 269 aa32.44■■■□□ 2.78
CHRD-203ENST00000356534 ZMYM4Q5VZL5 1548 aa32.43■■■□□ 2.78
CHRD-203ENST00000356534 ARHGEF40Q8TER5 1519 aa32.39■■■□□ 2.78
CHRD-203ENST00000356534 TIAM1Q13009 1591 aa32.39■■■□□ 2.78
CHRD-203ENST00000356534 ITSN2Q9NZM3 1697 aa32.38■■■□□ 2.77
CHRD-203ENST00000356534 RAPGEF3O95398 923 aa32.38■■■□□ 2.77
CHRD-203ENST00000356534 POGZQ7Z3K3 1410 aa32.36■■■□□ 2.77
CHRD-203ENST00000356534 SCAPERQ9BY12 1400 aa32.36■■■□□ 2.77
CHRD-203ENST00000356534 SUPT6HQ7KZ85 1726 aaKnown RBP32.35■■■□□ 2.77
CHRD-203ENST00000356534 MAGI2Q86UL8 1455 aa32.34■■■□□ 2.77
CHRD-203ENST00000356534 ABCC1P33527 1531 aa32.31■■■□□ 2.76
CHRD-203ENST00000356534 ZNF518AQ6AHZ1 1483 aa32.31■■■□□ 2.76
CHRD-203ENST00000356534 MAP3K1Q13233 1512 aa32.31■■■□□ 2.76
CHRD-203ENST00000356534 ZFYVE16Q7Z3T8 1539 aa32.29■■■□□ 2.76
CHRD-203ENST00000356534 GPATCH8Q9UKJ3 1502 aaKnown RBP32.27■■■□□ 2.76
CHRD-203ENST00000356534 CCNB3Q8WWL7 1395 aa32.27■■■□□ 2.76
CHRD-203ENST00000356534 KDM5CP41229 1560 aa32.27■■■□□ 2.76
CHRD-203ENST00000356534 SAMD9LQ8IVG5 1584 aa32.23■■■□□ 2.75
CHRD-203ENST00000356534 HECW2Q9P2P5 1572 aa32.23■■■□□ 2.75
CHRD-203ENST00000356534 KDM4FA0A1W2PPD8 638 aa32.22■■■□□ 2.75
CHRD-203ENST00000356534 PLEKHH2Q8IVE3 1493 aa32.21■■■□□ 2.75
CHRD-203ENST00000356534 LRRC9Q6ZRR7 1453 aa32.18■■■□□ 2.74
CHRD-203ENST00000356534 BCORL1Q5H9F3 1711 aa32.17■■■□□ 2.74
CHRD-203ENST00000356534 NCOA2Q15596 1464 aa32.16■■■□□ 2.74
CHRD-203ENST00000356534 SYCP2Q9BX26 1530 aa32.15■■■□□ 2.74
CHRD-203ENST00000356534 CFDP1Q9UEE9 299 aaPredicted RBP32.14■■■□□ 2.74
CHRD-203ENST00000356534 YEATS2Q9ULM3 1422 aa32.13■■■□□ 2.73
CHRD-203ENST00000356534 ADAMTSL3P82987 1691 aa32.11■■■□□ 2.73
CHRD-203ENST00000356534 ARHGEF12Q9NZN5 1544 aa32.11■■■□□ 2.73
CHRD-203ENST00000356534 KIAA1107Q9UPP5 1409 aa32.11■■■□□ 2.73
CHRD-203ENST00000356534 MLH3Q9UHC1 1453 aa32.1■■■□□ 2.73
CHRD-203ENST00000356534 APLP2Q06481 763 aa32.1■■■□□ 2.73
CHRD-203ENST00000356534 ZNF777Q9ULD5 760 aaPredicted RBP32.09■■■□□ 2.73
CHRD-203ENST00000356534 ATP10AO60312 1499 aa32.08■■■□□ 2.73
CHRD-203ENST00000356534 C9orf84Q5VXU9 1444 aa32.08■■■□□ 2.73
CHRD-203ENST00000356534 TRAPPC8Q9Y2L5 1435 aa32.08■■■□□ 2.73
CHRD-203ENST00000356534 KIDINS220Q9ULH0 1771 aa32.07■■■□□ 2.72
CHRD-203ENST00000356534 DIP2CQ9Y2E4 1556 aa32.07■■■□□ 2.72
CHRD-203ENST00000356534 REREQ9P2R6 1566 aa32.06■■■□□ 2.72
CHRD-203ENST00000356534 ARID4BQ4LE39 1312 aaPredicted RBP32.05■■■□□ 2.72
CHRD-203ENST00000356534 ABCA6Q8N139 1617 aa32.05■■■□□ 2.72
CHRD-203ENST00000356534 AFAP1Q8N556 730 aa32.05■■■□□ 2.72
CHRD-203ENST00000356534 SIGLEC1Q9BZZ2 1709 aa32.03■■■□□ 2.72
CHRD-203ENST00000356534 MYT1LQ9UL68 1186 aa32.02■■■□□ 2.72
CHRD-203ENST00000356534 MADDQ8WXG6 1647 aa32■■■□□ 2.71
CHRD-203ENST00000356534 INO80Q9ULG1 1556 aaPredicted RBP31.98■■■□□ 2.71
CHRD-203ENST00000356534 CAMSAP2Q08AD1 1489 aa31.97■■■□□ 2.71
CHRD-203ENST00000356534 FER1L4A9Z1Z3 1794 aa31.97■■■□□ 2.71
CHRD-203ENST00000356534 ATP7AQ04656 1500 aa31.96■■■□□ 2.71
CHRD-203ENST00000356534 RIMS1Q86UR5 1692 aaKnown RBP31.94■■■□□ 2.7
CHRD-203ENST00000356534 HNRNPMP52272 730 aaKnown RBP eCLIP31.93■■■□□ 2.7
CHRD-203ENST00000356534 KANK4Q5T7N3 995 aaPredicted RBP31.92■■■□□ 2.7
CHRD-203ENST00000356534 SPAG9O60271 1321 aaKnown RBP31.92■■■□□ 2.7
CHRD-203ENST00000356534 ADGBQ8N7X0 1667 aa31.92■■■□□ 2.7
CHRD-203ENST00000356534 MYOM3Q5VTT5 1437 aa31.91■■■□□ 2.7
CHRD-203ENST00000356534 ARHGEF5Q12774 1597 aa31.9■■■□□ 2.7
CHRD-203ENST00000356534 MIA2Q96PC5 1412 aa31.9■■■□□ 2.7
CHRD-203ENST00000356534 MBD5Q9P267 1494 aa31.9■■■□□ 2.7
CHRD-203ENST00000356534 AGLP35573 1532 aa31.9■■■□□ 2.7
CHRD-203ENST00000356534 CCDC141Q6ZP82 1450 aa31.89■■■□□ 2.7
CHRD-203ENST00000356534 PTPRMP28827 1452 aa31.86■■■□□ 2.69
CHRD-203ENST00000356534 RSPH4AQ5TD94 716 aa31.86■■■□□ 2.69
CHRD-203ENST00000356534 ZNF644Q9H582 1327 aaPredicted RBP31.85■■■□□ 2.69
CHRD-203ENST00000356534 RTEL1-TNFRSF6BF6WH68 1400 aa31.83■■■□□ 2.69
CHRD-203ENST00000356534 PLXNC1O60486 1568 aa31.8■■■□□ 2.68
CHRD-203ENST00000356534 PTPN23Q9H3S7 1636 aa31.77■■■□□ 2.68
CHRD-203ENST00000356534 MLECQ14165 292 aa31.76■■■□□ 2.67
CHRD-203ENST00000356534 A2MP01023 1474 aa31.76■■■□□ 2.67
CHRD-203ENST00000356534 MAST1Q9Y2H9 1570 aa31.74■■■□□ 2.67
CHRD-203ENST00000356534 CROCC2H7BZ55 1655 aa31.73■■■□□ 2.67
CHRD-203ENST00000356534 FGD6Q6ZV73 1430 aa31.69■■■□□ 2.66
CHRD-203ENST00000356534 TSPY4P0CV99 314 aa31.68■■■□□ 2.66
CHRD-203ENST00000356534 TSPY10P0CW01 314 aa31.68■■■□□ 2.66
CHRD-203ENST00000356534 MROH2AA6NES4 1674 aa31.67■■■□□ 2.66
CHRD-203ENST00000356534 TCOF1Q13428 1488 aaKnown RBP31.66■■■□□ 2.66
CHRD-203ENST00000356534 CNTLNQ9NXG0 1405 aa31.64■■■□□ 2.66
CHRD-203ENST00000356534 DNMT1P26358 1616 aaKnown RBP31.64■■■□□ 2.65
CHRD-203ENST00000356534 SETD1BQ9UPS6 1966 aaKnown RBP31.63■■■□□ 2.65
CHRD-203ENST00000356534 ESF1Q9H501 851 aaKnown RBP31.62■■■□□ 2.65
CHRD-203ENST00000356534 SHANK2Q9UPX8 1470 aa31.62■■■□□ 2.65
CHRD-203ENST00000356534 C3P01024 1663 aa31.61■■■□□ 2.65
CHRD-203ENST00000356534 DHX29Q7Z478 1369 aaKnown RBP31.59■■■□□ 2.65
CHRD-203ENST00000356534 PREX1Q8TCU6 1659 aa31.57■■■□□ 2.65
CHRD-203ENST00000356534 FAM135AQ9P2D6 1515 aa31.56■■■□□ 2.64
CHRD-203ENST00000356534 EIF2AK4Q9P2K8 1649 aaKnown RBP31.56■■■□□ 2.64
CHRD-203ENST00000356534 CLTCQ00610 1675 aaKnown RBP31.55■■■□□ 2.64
CHRD-203ENST00000356534 DAPK1P53355 1430 aa31.52■■■□□ 2.64
CHRD-203ENST00000356534 PPP6R1Q9UPN7 881 aa31.51■■■□□ 2.63
CHRD-203ENST00000356534 ABCC5O15440 1437 aa31.49■■■□□ 2.63
CHRD-203ENST00000356534 DUOX2Q9NRD8 1548 aa31.49■■■□□ 2.63
CHRD-203ENST00000356534 RNF17Q9BXT8 1623 aaKnown RBP31.48■■■□□ 2.63
CHRD-203ENST00000356534 PLPPR3Q6T4P5 718 aa31.47■■■□□ 2.63
CHRD-203ENST00000356534 LMTK3Q96Q04 1460 aa31.46■■■□□ 2.63
CHRD-203ENST00000356534 GGT6Q6P531 493 aa31.44■■■□□ 2.62
CHRD-203ENST00000356534 ZC3H13Q5T200 1668 aaKnown RBP31.44■■■□□ 2.62
CHRD-203ENST00000356534 KDM5DQ9BY66 1539 aa31.43■■■□□ 2.62
CHRD-203ENST00000356534 KIF3BO15066 747 aa31.41■■■□□ 2.62
CHRD-203ENST00000356534 KIF15Q9NS87 1388 aa31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms