RNA–Protein interactions for RNA: ENST00000355703.3

PCNX3-201, Transcript of pecanex 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNX3, Length 7,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-201ENST00000355703 FBXW7Q969H0 707 aa20.25■□□□□ 0.83
PCNX3-201ENST00000355703 TOMM22Q9NS69 142 aa20.25■□□□□ 0.83
PCNX3-201ENST00000355703 PES1O00541 588 aaKnown RBP20.24■□□□□ 0.83
PCNX3-201ENST00000355703 GTF2E1P29083 439 aaPredicted RBP20.22■□□□□ 0.83
PCNX3-201ENST00000355703 NUDCQ9Y266 331 aa20.22■□□□□ 0.83
PCNX3-201ENST00000355703 RTF1Q92541 710 aaKnown RBP20.21■□□□□ 0.83
PCNX3-201ENST00000355703 TCEAL9Q9UHQ7 104 aa20.21■□□□□ 0.83
PCNX3-201ENST00000355703 CTDP1Q9Y5B0 961 aaPredicted RBP20.2■□□□□ 0.82
PCNX3-201ENST00000355703 DCAF8L1A6NGE4 600 aa20.19■□□□□ 0.82
PCNX3-201ENST00000355703 MEX3CQ5U5Q3 659 aaKnown RBP20.19■□□□□ 0.82
PCNX3-201ENST00000355703 MSNP26038 577 aaKnown RBP20.19■□□□□ 0.82
PCNX3-201ENST00000355703 VSIG10Q8N0Z9 540 aa20.18■□□□□ 0.82
PCNX3-201ENST00000355703 STK26Q9P289 416 aa20.18■□□□□ 0.82
PCNX3-201ENST00000355703 MCCP23508 829 aa20.17■□□□□ 0.82
PCNX3-201ENST00000355703 SRPK2P78362 688 aaKnown RBP20.17■□□□□ 0.82
PCNX3-201ENST00000355703 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.15■□□□□ 0.821e-7■■■■■ 77.7
PCNX3-201ENST00000355703 TNNT3P45378 269 aaPredicted RBP20.15■□□□□ 0.82
PCNX3-201ENST00000355703 KIAA1211Q6ZU35 1233 aa20.14■□□□□ 0.81
PCNX3-201ENST00000355703 NOL8Q76FK4 1167 aaKnown RBP20.13■□□□□ 0.81
PCNX3-201ENST00000355703 HSCBQ8IWL3 235 aa20.11■□□□□ 0.81
PCNX3-201ENST00000355703 TRIM34Q9BYJ4 488 aa20.1■□□□□ 0.81
PCNX3-201ENST00000355703 GOLGA6L1Q8N7Z2 621 aa20.09■□□□□ 0.81
PCNX3-201ENST00000355703 B4GALNT3Q6L9W6 998 aa20.07■□□□□ 0.8
PCNX3-201ENST00000355703 GZF1Q9H116 711 aaPredicted RBP20.05■□□□□ 0.8
PCNX3-201ENST00000355703 PPP1R1BQ9UD71 204 aaPredicted RBP20.05■□□□□ 0.8
PCNX3-201ENST00000355703 PAF1Q8N7H5 531 aa20.03■□□□□ 0.8
PCNX3-201ENST00000355703 LTV1Q96GA3 475 aaPredicted RBP20.02■□□□□ 0.8
PCNX3-201ENST00000355703 CARD11Q9BXL7 1154 aa20.02■□□□□ 0.8
PCNX3-201ENST00000355703 MTUS2Q5JR59 1369 aa20.02■□□□□ 0.79
PCNX3-201ENST00000355703 WDR70Q9NW82 654 aa20.01■□□□□ 0.79
PCNX3-201ENST00000355703 TPM4P67936 248 aa20.01■□□□□ 0.79
PCNX3-201ENST00000355703 FOXD4L5Q5VV16 416 aaPredicted RBP20■□□□□ 0.79
PCNX3-201ENST00000355703 FOXD4L4Q8WXT5 416 aaPredicted RBP20■□□□□ 0.79
PCNX3-201ENST00000355703 TRIM6-TRIM34B2RNG4 842 aa20■□□□□ 0.79
PCNX3-201ENST00000355703 TPD52L1Q16890 204 aaPredicted RBP20■□□□□ 0.79
PCNX3-201ENST00000355703 SUPT16HQ9Y5B9 1047 aaKnown RBP19.99■□□□□ 0.79
PCNX3-201ENST00000355703 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.99■□□□□ 0.79
PCNX3-201ENST00000355703 FOXD4L1Q9NU39 408 aa19.98■□□□□ 0.79
PCNX3-201ENST00000355703 CCAR2Q8N163 923 aaKnown RBP19.98■□□□□ 0.79
PCNX3-201ENST00000355703 NUTM2FA1L443 756 aa19.98■□□□□ 0.79
PCNX3-201ENST00000355703 PPM1FP49593 454 aaPredicted RBP19.97■□□□□ 0.79
PCNX3-201ENST00000355703 PLEKHD1A6NEE1 506 aa19.96■□□□□ 0.79
PCNX3-201ENST00000355703 CSRNP3Q8WYN3 585 aa19.96■□□□□ 0.79
PCNX3-201ENST00000355703 CDCA8Q53HL2 280 aa19.95■□□□□ 0.78
PCNX3-201ENST00000355703 NGEFQ8N5V2 710 aa19.95■□□□□ 0.78
PCNX3-201ENST00000355703 DHX16O60231 1041 aaKnown RBP19.94■□□□□ 0.78
PCNX3-201ENST00000355703 EVA1CP58658 441 aa19.94■□□□□ 0.78
PCNX3-201ENST00000355703 TPM3P06753 285 aa19.93■□□□□ 0.78
PCNX3-201ENST00000355703 SYTL4Q96C24 671 aaPredicted RBP19.93■□□□□ 0.78
PCNX3-201ENST00000355703 IBSPP21815 317 aaPredicted RBP19.93■□□□□ 0.78
PCNX3-201ENST00000355703 SLC4A10Q6U841 1118 aa19.93■□□□□ 0.78
PCNX3-201ENST00000355703 PCMTD1Q96MG8 357 aaPredicted RBP19.92■□□□□ 0.78
PCNX3-201ENST00000355703 CHMP4BQ9H444 224 aaKnown RBP19.91■□□□□ 0.78
PCNX3-201ENST00000355703 SLC4A3P48751 1232 aa19.9■□□□□ 0.78
PCNX3-201ENST00000355703 AK7Q96M32 723 aa19.88■□□□□ 0.77
PCNX3-201ENST00000355703 MORC1Q86VD1 984 aa19.87■□□□□ 0.77
PCNX3-201ENST00000355703 CALRP27797 417 aaKnown RBP19.87■□□□□ 0.77
PCNX3-201ENST00000355703 HDGFP51858 240 aaKnown RBP19.86■□□□□ 0.77
PCNX3-201ENST00000355703 FOXD4L6Q3SYB3 417 aaPredicted RBP19.86■□□□□ 0.77
PCNX3-201ENST00000355703 GGT6Q6P531 493 aa19.86■□□□□ 0.77
PCNX3-201ENST00000355703 FOXD4L3Q6VB84 417 aaPredicted RBP19.86■□□□□ 0.77
PCNX3-201ENST00000355703 CCDC43Q96MW1 224 aaKnown RBP19.86■□□□□ 0.77
PCNX3-201ENST00000355703 NUTM2DQ5VT03 806 aaPredicted RBP19.85■□□□□ 0.77
PCNX3-201ENST00000355703 ITPRIPQ8IWB1 547 aa19.85■□□□□ 0.77
PCNX3-201ENST00000355703 SF3A1Q15459 793 aaKnown RBP19.85■□□□□ 0.77
PCNX3-201ENST00000355703 TMEM132AQ24JP5 1023 aa19.84■□□□□ 0.77
PCNX3-201ENST00000355703 GPATCH3Q96I76 525 aa19.84■□□□□ 0.77
PCNX3-201ENST00000355703 ZFYVE27Q5T4F4 411 aa19.83■□□□□ 0.77
PCNX3-201ENST00000355703 RRP12Q5JTH9 1297 aaKnown RBP19.83■□□□□ 0.77
PCNX3-201ENST00000355703 MTMR7Q9Y216 660 aa19.83■□□□□ 0.76
PCNX3-201ENST00000355703 CCAR1Q8IX12 1150 aaKnown RBP19.83■□□□□ 0.76
PCNX3-201ENST00000355703 HTATSF1O43719 755 aaKnown RBP19.82■□□□□ 0.76
PCNX3-201ENST00000355703 NOL10Q9BSC4 688 aaKnown RBP19.82■□□□□ 0.76
PCNX3-201ENST00000355703 CCDC34Q96HJ3 373 aa19.82■□□□□ 0.76
PCNX3-201ENST00000355703 SETQ01105 290 aaPredicted RBP19.81■□□□□ 0.76
PCNX3-201ENST00000355703 MIER1Q8N108 512 aa19.81■□□□□ 0.76
PCNX3-201ENST00000355703 MS4A1P11836 297 aa19.8■□□□□ 0.76
PCNX3-201ENST00000355703 TSR1Q2NL82 804 aaKnown RBP19.8■□□□□ 0.76
PCNX3-201ENST00000355703 PTMSP20962 102 aa19.8■□□□□ 0.76
PCNX3-201ENST00000355703 BCL11BQ9C0K0 894 aaPredicted RBP19.8■□□□□ 0.76
PCNX3-201ENST00000355703 AKAP17AQ02040 695 aaKnown RBP19.8■□□□□ 0.76
PCNX3-201ENST00000355703 CCDC97Q96F63 343 aaPredicted RBP19.79■□□□□ 0.76
PCNX3-201ENST00000355703 ODF2Q5BJF6 829 aa19.78■□□□□ 0.76
PCNX3-201ENST00000355703 CFDP1Q9UEE9 299 aaPredicted RBP19.78■□□□□ 0.76
PCNX3-201ENST00000355703 FYB1O15117 783 aa19.78■□□□□ 0.76
PCNX3-201ENST00000355703 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.77■□□□□ 0.76
PCNX3-201ENST00000355703 TPM2P07951 284 aa19.76■□□□□ 0.75
PCNX3-201ENST00000355703 VPS37DQ86XT2 251 aa19.76■□□□□ 0.75
PCNX3-201ENST00000355703 SLKQ9H2G2 1235 aaPredicted RBP19.76■□□□□ 0.75
PCNX3-201ENST00000355703 KDM4AO75164 1064 aa19.76■□□□□ 0.75
PCNX3-201ENST00000355703 R3HCC1Q9Y3T6 440 aaKnown RBP19.75■□□□□ 0.75
PCNX3-201ENST00000355703 CT47A1Q5JQC4 288 aaPredicted RBP19.75■□□□□ 0.75
PCNX3-201ENST00000355703 SKIDA1Q1XH10 827 aa19.75■□□□□ 0.75
PCNX3-201ENST00000355703 HDGFL2Q7Z4V5 671 aaPredicted RBP19.75■□□□□ 0.75
PCNX3-201ENST00000355703 AMOTL1Q8IY63 956 aa19.75■□□□□ 0.75
PCNX3-201ENST00000355703 H3BQV1 296 aa19.74■□□□□ 0.75
PCNX3-201ENST00000355703 IFFO2Q5TF58 517 aa19.74■□□□□ 0.75
PCNX3-201ENST00000355703 NGDNQ8NEJ9 315 aaKnown RBP19.73■□□□□ 0.75
PCNX3-201ENST00000355703 NOP58Q9Y2X3 529 aaKnown RBP19.73■□□□□ 0.75
PCNX3-201ENST00000355703 MFAP1P55081 439 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms