RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 ABCA9Q8IUA7 1624 aa14.45□□□□□ -0.1
NPHP1-202ENST00000355301 ZNF644Q9H582 1327 aaPredicted RBP14.45□□□□□ -0.1
NPHP1-202ENST00000355301 PTPRKQ15262 1439 aa14.44□□□□□ -0.1
NPHP1-202ENST00000355301 DNMT1P26358 1616 aaKnown RBP14.44□□□□□ -0.1
NPHP1-202ENST00000355301 ARAP3Q8WWN8 1544 aa14.44□□□□□ -0.1
NPHP1-202ENST00000355301 PLCH2O75038 1416 aa14.44□□□□□ -0.1
NPHP1-202ENST00000355301 ARHGAP5Q13017 1502 aa14.42□□□□□ -0.1
NPHP1-202ENST00000355301 ZNF777Q9ULD5 760 aaPredicted RBP14.42□□□□□ -0.1
NPHP1-202ENST00000355301 DAPK1P53355 1430 aa14.42□□□□□ -0.1
NPHP1-202ENST00000355301 SAMD9LQ8IVG5 1584 aa14.41□□□□□ -0.1
NPHP1-202ENST00000355301 ABCC5O15440 1437 aa14.41□□□□□ -0.1
NPHP1-202ENST00000355301 HFM1A2PYH4 1435 aa14.38□□□□□ -0.11
NPHP1-202ENST00000355301 SETD5Q9C0A6 1442 aa14.38□□□□□ -0.11
NPHP1-202ENST00000355301 ARHGEF5Q12774 1597 aa14.38□□□□□ -0.11
NPHP1-202ENST00000355301 CROCC2H7BZ55 1655 aa14.38□□□□□ -0.11
NPHP1-202ENST00000355301 AKNAQ7Z591 1439 aa14.38□□□□□ -0.11
NPHP1-202ENST00000355301 PLEKHH2Q8IVE3 1493 aa14.38□□□□□ -0.11
NPHP1-202ENST00000355301 MBD5Q9P267 1494 aa14.38□□□□□ -0.11
NPHP1-202ENST00000355301 EFCAB2Q5VUJ9 269 aa14.37□□□□□ -0.11
NPHP1-202ENST00000355301 KIAA1107Q9UPP5 1409 aa14.37□□□□□ -0.11
NPHP1-202ENST00000355301 ROCK1Q13464 1354 aa14.36□□□□□ -0.11
NPHP1-202ENST00000355301 SHANK2Q9UPX8 1470 aa14.35□□□□□ -0.11
NPHP1-202ENST00000355301 NAIPQ13075 1403 aa14.35□□□□□ -0.11
NPHP1-202ENST00000355301 RAB3GAP2Q9H2M9 1393 aa14.35□□□□□ -0.11
NPHP1-202ENST00000355301 RSPH4AQ5TD94 716 aa14.35□□□□□ -0.11
NPHP1-202ENST00000355301 GLI2P10070 1586 aa14.34□□□□□ -0.11
NPHP1-202ENST00000355301 SYCP2Q9BX26 1530 aa14.34□□□□□ -0.11
NPHP1-202ENST00000355301 HRCP23327 699 aa14.34□□□□□ -0.11
NPHP1-202ENST00000355301 ABCC1P33527 1531 aa14.34□□□□□ -0.11
NPHP1-202ENST00000355301 FANCAO15360 1455 aa14.34□□□□□ -0.11
NPHP1-202ENST00000355301 CCDC141Q6ZP82 1450 aa14.34□□□□□ -0.11
NPHP1-202ENST00000355301 CD109Q6YHK3 1445 aa14.34□□□□□ -0.11
NPHP1-202ENST00000355301 GCC2Q8IWJ2 1684 aa14.33□□□□□ -0.11
NPHP1-202ENST00000355301 HNRNPMP52272 730 aaKnown RBP eCLIP14.33□□□□□ -0.11
NPHP1-202ENST00000355301 CHIC2Q9UKJ5 165 aa14.33□□□□□ -0.11
NPHP1-202ENST00000355301 ADGRL2O95490 1459 aa14.33□□□□□ -0.12
NPHP1-202ENST00000355301 ADGBQ8N7X0 1667 aa14.33□□□□□ -0.12
NPHP1-202ENST00000355301 DIP2BQ9P265 1576 aa14.32□□□□□ -0.12
NPHP1-202ENST00000355301 ARHGEF12Q9NZN5 1544 aa14.31□□□□□ -0.12
NPHP1-202ENST00000355301 MAP3K4Q9Y6R4 1608 aa14.31□□□□□ -0.12
NPHP1-202ENST00000355301 CCER1Q8TC90 406 aaPredicted RBP14.31□□□□□ -0.12
NPHP1-202ENST00000355301 NCOA1Q15788 1441 aa14.31□□□□□ -0.12
NPHP1-202ENST00000355301 C9orf84Q5VXU9 1444 aa14.31□□□□□ -0.12
NPHP1-202ENST00000355301 TSPY4P0CV99 314 aa14.3□□□□□ -0.12
NPHP1-202ENST00000355301 TSPY10P0CW01 314 aa14.3□□□□□ -0.12
NPHP1-202ENST00000355301 CFAP74Q9C0B2 1584 aa14.3□□□□□ -0.12
NPHP1-202ENST00000355301 RRP7BPQ9NSQ0 103 aa14.29□□□□□ -0.12
NPHP1-202ENST00000355301 MAST1Q9Y2H9 1570 aa14.29□□□□□ -0.12
NPHP1-202ENST00000355301 ANKRD30AQ9BXX3 1397 aa14.28□□□□□ -0.12
NPHP1-202ENST00000355301 DNAJC5Q9H3Z4 198 aa14.27□□□□□ -0.12
NPHP1-202ENST00000355301 ADGRL1O94910 1474 aa14.27□□□□□ -0.12
NPHP1-202ENST00000355301 DHX57Q6P158 1386 aaKnown RBP14.27□□□□□ -0.13
NPHP1-202ENST00000355301 NEO1Q92859 1461 aa14.26□□□□□ -0.13
NPHP1-202ENST00000355301 TRAPPC8Q9Y2L5 1435 aa14.26□□□□□ -0.13
NPHP1-202ENST00000355301 FAM69CQ0P6D2 419 aa14.25□□□□□ -0.13
NPHP1-202ENST00000355301 SCAPERQ9BY12 1400 aa14.25□□□□□ -0.13
NPHP1-202ENST00000355301 KDM6BO15054 1643 aa14.24□□□□□ -0.13
NPHP1-202ENST00000355301 PLXNC1O60486 1568 aa14.24□□□□□ -0.13
NPHP1-202ENST00000355301 ACIN1Q9UKV3 1341 aaKnown RBP14.23□□□□□ -0.13
NPHP1-202ENST00000355301 KIF13AQ9H1H9 1805 aa14.23□□□□□ -0.13
NPHP1-202ENST00000355301 ZEB1P37275 1124 aaPredicted RBP14.23□□□□□ -0.13
NPHP1-202ENST00000355301 CLSPNQ9HAW4 1339 aa14.22□□□□□ -0.13
NPHP1-202ENST00000355301 KIF15Q9NS87 1388 aa14.22□□□□□ -0.13
NPHP1-202ENST00000355301 RTEL1-TNFRSF6BF6WH68 1400 aa14.22□□□□□ -0.13
NPHP1-202ENST00000355301 AFAP1Q8N556 730 aa14.21□□□□□ -0.14
NPHP1-202ENST00000355301 ANKRD50Q9ULJ7 1429 aa14.21□□□□□ -0.14
NPHP1-202ENST00000355301 ZNF518AQ6AHZ1 1483 aa14.2□□□□□ -0.14
NPHP1-202ENST00000355301 ZFYVE16Q7Z3T8 1539 aa14.2□□□□□ -0.14
NPHP1-202ENST00000355301 PPRC1Q5VV67 1664 aaKnown RBP14.2□□□□□ -0.14
NPHP1-202ENST00000355301 SPAG9O60271 1321 aaKnown RBP14.19□□□□□ -0.14
NPHP1-202ENST00000355301 POGZQ7Z3K3 1410 aa14.19□□□□□ -0.14
NPHP1-202ENST00000355301 INO80Q9ULG1 1556 aaPredicted RBP14.19□□□□□ -0.14
NPHP1-202ENST00000355301 KDM5CP41229 1560 aa14.18□□□□□ -0.14
NPHP1-202ENST00000355301 TEX14Q8IWB6 1497 aa14.18□□□□□ -0.14
NPHP1-202ENST00000355301 ATP7AQ04656 1500 aa14.17□□□□□ -0.14
NPHP1-202ENST00000355301 DUOX2Q9NRD8 1548 aa14.17□□□□□ -0.14
NPHP1-202ENST00000355301 TSPOAP1O95153 1857 aa14.16□□□□□ -0.14
NPHP1-202ENST00000355301 DENND4BO75064 1496 aaPredicted RBP14.16□□□□□ -0.14
NPHP1-202ENST00000355301 MLH3Q9UHC1 1453 aa14.14□□□□□ -0.15
NPHP1-202ENST00000355301 ERBINQ96RT1 1412 aa14.14□□□□□ -0.15
NPHP1-202ENST00000355301 KIDINS220Q9ULH0 1771 aa14.14□□□□□ -0.15
NPHP1-202ENST00000355301 RICTORQ6R327 1708 aa14.14□□□□□ -0.15
NPHP1-202ENST00000355301 TRIM52Q96A61 297 aa14.13□□□□□ -0.15
NPHP1-202ENST00000355301 HECW2Q9P2P5 1572 aa14.13□□□□□ -0.15
NPHP1-202ENST00000355301 KDM5DQ9BY66 1539 aa14.11□□□□□ -0.15
NPHP1-202ENST00000355301 RAPGEF3O95398 923 aa14.11□□□□□ -0.15
NPHP1-202ENST00000355301 FRMPD1Q5SYB0 1578 aa14.1□□□□□ -0.15
NPHP1-202ENST00000355301 MPHOSPH9Q99550 1183 aa14.1□□□□□ -0.15
NPHP1-202ENST00000355301 UNC13BO14795 1591 aa14.1□□□□□ -0.15
NPHP1-202ENST00000355301 PZPP20742 1482 aa14.1□□□□□ -0.15
NPHP1-202ENST00000355301 ZMYM4Q5VZL5 1548 aa14.08□□□□□ -0.16
NPHP1-202ENST00000355301 DHX29Q7Z478 1369 aaKnown RBP14.08□□□□□ -0.16
NPHP1-202ENST00000355301 MYT1LQ9UL68 1186 aa14.07□□□□□ -0.16
NPHP1-202ENST00000355301 EIF2AK4Q9P2K8 1649 aaKnown RBP14.07□□□□□ -0.16
NPHP1-202ENST00000355301 MAGI2Q86UL8 1455 aa14.07□□□□□ -0.16
NPHP1-202ENST00000355301 NUP155O75694 1391 aa14.07□□□□□ -0.16
NPHP1-202ENST00000355301 ABCA6Q8N139 1617 aa14.06□□□□□ -0.16
NPHP1-202ENST00000355301 SLC4A1APQ9BWU0 796 aaKnown RBP14.06□□□□□ -0.16
NPHP1-202ENST00000355301 A2MP01023 1474 aa14.05□□□□□ -0.16
NPHP1-202ENST00000355301 DEPDC5O75140 1603 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms