RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 ZNF777Q9ULD5 760 aaPredicted RBP23.44■■□□□ 1.34
CTSA-202ENST00000354880 MAPKBP1O60336 1514 aa23.42■■□□□ 1.34
CTSA-202ENST00000354880 ABCA9Q8IUA7 1624 aa23.41■■□□□ 1.34
CTSA-202ENST00000354880 PLCH2O75038 1416 aa23.4■■□□□ 1.34
CTSA-202ENST00000354880 PTPRKQ15262 1439 aa23.4■■□□□ 1.34
CTSA-202ENST00000354880 ARHGAP5Q13017 1502 aa23.4■■□□□ 1.34
CTSA-202ENST00000354880 DNMT1P26358 1616 aaKnown RBP23.38■■□□□ 1.33
CTSA-202ENST00000354880 DAPK1P53355 1430 aa23.36■■□□□ 1.33
CTSA-202ENST00000354880 ARAP3Q8WWN8 1544 aa23.35■■□□□ 1.33
CTSA-202ENST00000354880 SAMD9LQ8IVG5 1584 aa23.35■■□□□ 1.33
CTSA-202ENST00000354880 ABCC5O15440 1437 aa23.34■■□□□ 1.33
CTSA-202ENST00000354880 EFCAB2Q5VUJ9 269 aa23.32■■□□□ 1.32
CTSA-202ENST00000354880 SETD5Q9C0A6 1442 aa23.32■■□□□ 1.32
CTSA-202ENST00000354880 CHIC2Q9UKJ5 165 aa23.3■■□□□ 1.32
CTSA-202ENST00000354880 PLEKHH2Q8IVE3 1493 aa23.29■■□□□ 1.32
CTSA-202ENST00000354880 HFM1A2PYH4 1435 aa23.28■■□□□ 1.32
CTSA-202ENST00000354880 MBD5Q9P267 1494 aa23.28■■□□□ 1.32
CTSA-202ENST00000354880 ARHGEF5Q12774 1597 aa23.28■■□□□ 1.32
CTSA-202ENST00000354880 KIAA1107Q9UPP5 1409 aa23.27■■□□□ 1.32
CTSA-202ENST00000354880 HNRNPMP52272 730 aaKnown RBP eCLIP23.27■■□□□ 1.32
CTSA-202ENST00000354880 CROCC2H7BZ55 1655 aa23.27■■□□□ 1.32
CTSA-202ENST00000354880 RAB3GAP2Q9H2M9 1393 aa23.27■■□□□ 1.32
CTSA-202ENST00000354880 CD109Q6YHK3 1445 aa23.26■■□□□ 1.31
CTSA-202ENST00000354880 AKNAQ7Z591 1439 aa23.26■■□□□ 1.31
CTSA-202ENST00000354880 SYCP2Q9BX26 1530 aa23.26■■□□□ 1.31
CTSA-202ENST00000354880 RSPH4AQ5TD94 716 aa23.25■■□□□ 1.31
CTSA-202ENST00000354880 ROCK1Q13464 1354 aa23.25■■□□□ 1.31
CTSA-202ENST00000354880 FANCAO15360 1455 aa23.25■■□□□ 1.31
CTSA-202ENST00000354880 NAIPQ13075 1403 aa23.24■■□□□ 1.31
CTSA-202ENST00000354880 CCDC141Q6ZP82 1450 aa23.24■■□□□ 1.31
CTSA-202ENST00000354880 CCER1Q8TC90 406 aaPredicted RBP23.24■■□□□ 1.31
CTSA-202ENST00000354880 SHANK2Q9UPX8 1470 aa23.23■■□□□ 1.31
CTSA-202ENST00000354880 ABCC1P33527 1531 aa23.23■■□□□ 1.31
CTSA-202ENST00000354880 GLI2P10070 1586 aa23.23■■□□□ 1.31
CTSA-202ENST00000354880 RRP7BPQ9NSQ0 103 aa23.22■■□□□ 1.31
CTSA-202ENST00000354880 TSPY4P0CV99 314 aa23.22■■□□□ 1.31
CTSA-202ENST00000354880 TSPY10P0CW01 314 aa23.22■■□□□ 1.31
CTSA-202ENST00000354880 HRCP23327 699 aa23.21■■□□□ 1.31
CTSA-202ENST00000354880 ADGBQ8N7X0 1667 aa23.21■■□□□ 1.31
CTSA-202ENST00000354880 ARHGEF12Q9NZN5 1544 aa23.2■■□□□ 1.3
CTSA-202ENST00000354880 DIP2BQ9P265 1576 aa23.2■■□□□ 1.3
CTSA-202ENST00000354880 GCC2Q8IWJ2 1684 aa23.2■■□□□ 1.3
CTSA-202ENST00000354880 ADGRL2O95490 1459 aa23.2■■□□□ 1.3
CTSA-202ENST00000354880 C9orf84Q5VXU9 1444 aa23.19■■□□□ 1.3
CTSA-202ENST00000354880 DNAJC5Q9H3Z4 198 aa23.18■■□□□ 1.3
CTSA-202ENST00000354880 MAP3K4Q9Y6R4 1608 aa23.18■■□□□ 1.3
CTSA-202ENST00000354880 NCOA1Q15788 1441 aa23.17■■□□□ 1.3
CTSA-202ENST00000354880 FAM69CQ0P6D2 419 aa23.17■■□□□ 1.3
CTSA-202ENST00000354880 CFAP74Q9C0B2 1584 aa23.17■■□□□ 1.3
CTSA-202ENST00000354880 ANKRD30AQ9BXX3 1397 aa23.16■■□□□ 1.3
CTSA-202ENST00000354880 ADGRL1O94910 1474 aa23.15■■□□□ 1.3
CTSA-202ENST00000354880 MAST1Q9Y2H9 1570 aa23.13■■□□□ 1.29
CTSA-202ENST00000354880 TRAPPC8Q9Y2L5 1435 aa23.12■■□□□ 1.29
CTSA-202ENST00000354880 DHX57Q6P158 1386 aaKnown RBP23.11■■□□□ 1.29
CTSA-202ENST00000354880 SCAPERQ9BY12 1400 aa23.11■■□□□ 1.29
CTSA-202ENST00000354880 NEO1Q92859 1461 aa23.1■■□□□ 1.29
CTSA-202ENST00000354880 KDM6BO15054 1643 aa23.08■■□□□ 1.28
CTSA-202ENST00000354880 AFAP1Q8N556 730 aa23.07■■□□□ 1.28
CTSA-202ENST00000354880 KIF13AQ9H1H9 1805 aa23.06■■□□□ 1.28
CTSA-202ENST00000354880 KIF15Q9NS87 1388 aa23.06■■□□□ 1.28
CTSA-202ENST00000354880 ZEB1P37275 1124 aaPredicted RBP23.05■■□□□ 1.28
CTSA-202ENST00000354880 PLXNC1O60486 1568 aa23.04■■□□□ 1.28
CTSA-202ENST00000354880 SPAG9O60271 1321 aaKnown RBP23.04■■□□□ 1.28
CTSA-202ENST00000354880 ACIN1Q9UKV3 1341 aaKnown RBP23.03■■□□□ 1.28
CTSA-202ENST00000354880 RTEL1-TNFRSF6BF6WH68 1400 aa23.03■■□□□ 1.28
CTSA-202ENST00000354880 ANKRD50Q9ULJ7 1429 aa23.03■■□□□ 1.28
CTSA-202ENST00000354880 ZNF518AQ6AHZ1 1483 aa23.02■■□□□ 1.28
CTSA-202ENST00000354880 TSPOAP1O95153 1857 aa23.02■■□□□ 1.28
CTSA-202ENST00000354880 CLSPNQ9HAW4 1339 aa23.01■■□□□ 1.27
CTSA-202ENST00000354880 ZFYVE16Q7Z3T8 1539 aa23■■□□□ 1.27
CTSA-202ENST00000354880 PPRC1Q5VV67 1664 aaKnown RBP23■■□□□ 1.27
CTSA-202ENST00000354880 POGZQ7Z3K3 1410 aa23■■□□□ 1.27
CTSA-202ENST00000354880 TEX14Q8IWB6 1497 aa22.99■■□□□ 1.27
CTSA-202ENST00000354880 INO80Q9ULG1 1556 aaPredicted RBP22.98■■□□□ 1.27
CTSA-202ENST00000354880 TRIM52Q96A61 297 aa22.97■■□□□ 1.27
CTSA-202ENST00000354880 ATP7AQ04656 1500 aa22.97■■□□□ 1.27
CTSA-202ENST00000354880 DENND4BO75064 1496 aaPredicted RBP22.97■■□□□ 1.27
CTSA-202ENST00000354880 KDM5CP41229 1560 aa22.96■■□□□ 1.27
CTSA-202ENST00000354880 DUOX2Q9NRD8 1548 aa22.96■■□□□ 1.27
CTSA-202ENST00000354880 MYT1LQ9UL68 1186 aa22.92■■□□□ 1.26
CTSA-202ENST00000354880 KIDINS220Q9ULH0 1771 aa22.91■■□□□ 1.26
CTSA-202ENST00000354880 RAPGEF3O95398 923 aa22.91■■□□□ 1.26
CTSA-202ENST00000354880 ERBINQ96RT1 1412 aa22.9■■□□□ 1.26
CTSA-202ENST00000354880 RICTORQ6R327 1708 aa22.9■■□□□ 1.26
CTSA-202ENST00000354880 MLH3Q9UHC1 1453 aa22.9■■□□□ 1.26
CTSA-202ENST00000354880 HECW2Q9P2P5 1572 aa22.89■■□□□ 1.25
CTSA-202ENST00000354880 MPHOSPH9Q99550 1183 aa22.87■■□□□ 1.25
CTSA-202ENST00000354880 FRMPD1Q5SYB0 1578 aa22.84■■□□□ 1.25
CTSA-202ENST00000354880 PZPP20742 1482 aa22.83■■□□□ 1.25
CTSA-202ENST00000354880 NUP155O75694 1391 aa22.83■■□□□ 1.25
CTSA-202ENST00000354880 KDM5DQ9BY66 1539 aa22.83■■□□□ 1.24
CTSA-202ENST00000354880 SLC4A1APQ9BWU0 796 aaKnown RBP22.82■■□□□ 1.24
CTSA-202ENST00000354880 DHX29Q7Z478 1369 aaKnown RBP22.82■■□□□ 1.24
CTSA-202ENST00000354880 UNC13BO14795 1591 aa22.81■■□□□ 1.24
CTSA-202ENST00000354880 TRHP20396 242 aaPredicted RBP22.81■■□□□ 1.24
CTSA-202ENST00000354880 ZMYM4Q5VZL5 1548 aa22.8■■□□□ 1.24
CTSA-202ENST00000354880 ABCA6Q8N139 1617 aa22.79■■□□□ 1.24
CTSA-202ENST00000354880 A2MP01023 1474 aa22.79■■□□□ 1.24
CTSA-202ENST00000354880 EIF2AK4Q9P2K8 1649 aaKnown RBP22.78■■□□□ 1.24
CTSA-202ENST00000354880 MAGI2Q86UL8 1455 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms