RNA–Protein interactions for RNA: ENST00000348899.7

PMS2CL-201, Transcript of PMS2 C-terminal like pseudogene, humanhuman

TSL 3

Gene PMS2CL, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2CL-201ENST00000348899 PTPRMP28827 1452 aa36.9■■■■□ 3.5
PMS2CL-201ENST00000348899 POGZQ7Z3K3 1410 aa36.9■■■■□ 3.5
PMS2CL-201ENST00000348899 MYO5CQ9NQX4 1742 aa36.89■■■■□ 3.5
PMS2CL-201ENST00000348899 PCF11O94913 1555 aaKnown RBP36.88■■■■□ 3.49
PMS2CL-201ENST00000348899 YEATS2Q9ULM3 1422 aa36.88■■■■□ 3.49
PMS2CL-201ENST00000348899 CCDC18Q5T9S5 1454 aa36.87■■■■□ 3.49
PMS2CL-201ENST00000348899 ZFYVE16Q7Z3T8 1539 aa36.86■■■■□ 3.49
PMS2CL-201ENST00000348899 MADDQ8WXG6 1647 aa36.8■■■■□ 3.48
PMS2CL-201ENST00000348899 FYCO1Q9BQS8 1478 aa36.79■■■■□ 3.48
PMS2CL-201ENST00000348899 ARHGAP5Q13017 1502 aa36.78■■■■□ 3.48
PMS2CL-201ENST00000348899 SIGLEC1Q9BZZ2 1709 aa36.73■■■■□ 3.47
PMS2CL-201ENST00000348899 ZNF518AQ6AHZ1 1483 aa36.71■■■■□ 3.47
PMS2CL-201ENST00000348899 ATP10AO60312 1499 aa36.69■■■■□ 3.46
PMS2CL-201ENST00000348899 AFAP1Q8N556 730 aa36.69■■■■□ 3.46
PMS2CL-201ENST00000348899 CDC42BPBQ9Y5S2 1711 aa36.68■■■■□ 3.46
PMS2CL-201ENST00000348899 KDM5CP41229 1560 aa36.66■■■■□ 3.46
PMS2CL-201ENST00000348899 PREX2Q70Z35 1606 aa36.64■■■■□ 3.46
PMS2CL-201ENST00000348899 C9orf84Q5VXU9 1444 aa36.64■■■■□ 3.46
PMS2CL-201ENST00000348899 RIMS1Q86UR5 1692 aaKnown RBP36.64■■■■□ 3.46
PMS2CL-201ENST00000348899 MLECQ14165 292 aa36.59■■■■□ 3.45
PMS2CL-201ENST00000348899 ARHGEF12Q9NZN5 1544 aa36.58■■■■□ 3.45
PMS2CL-201ENST00000348899 ABCC1P33527 1531 aa36.57■■■■□ 3.44
PMS2CL-201ENST00000348899 TRAPPC8Q9Y2L5 1435 aa36.55■■■■□ 3.44
PMS2CL-201ENST00000348899 MLH3Q9UHC1 1453 aa36.55■■■■□ 3.44
PMS2CL-201ENST00000348899 CDC42BPAQ5VT25 1732 aa36.54■■■■□ 3.44
PMS2CL-201ENST00000348899 LMTK3Q96Q04 1460 aa36.53■■■■□ 3.44
PMS2CL-201ENST00000348899 GPATCH8Q9UKJ3 1502 aaKnown RBP36.5■■■■□ 3.43
PMS2CL-201ENST00000348899 ILDR1Q86SU0 546 aaPredicted RBP36.49■■■■□ 3.43
PMS2CL-201ENST00000348899 DIP2CQ9Y2E4 1556 aa36.49■■■■□ 3.43
PMS2CL-201ENST00000348899 MYT1LQ9UL68 1186 aa36.48■■■■□ 3.43
PMS2CL-201ENST00000348899 ITSN2Q9NZM3 1697 aa36.47■■■■□ 3.43
PMS2CL-201ENST00000348899 FER1L4A9Z1Z3 1794 aa36.46■■■■□ 3.43
PMS2CL-201ENST00000348899 REREQ9P2R6 1566 aa36.46■■■■□ 3.43
PMS2CL-201ENST00000348899 CEP162Q5TB80 1403 aa36.46■■■■□ 3.43
PMS2CL-201ENST00000348899 PLPPR3Q6T4P5 718 aa36.44■■■■□ 3.42
PMS2CL-201ENST00000348899 ABCA6Q8N139 1617 aa36.42■■■■□ 3.42
PMS2CL-201ENST00000348899 ZNF777Q9ULD5 760 aaPredicted RBP36.42■■■■□ 3.42
PMS2CL-201ENST00000348899 MTUS2Q5JR59 1369 aa36.41■■■■□ 3.42
PMS2CL-201ENST00000348899 SAMD9LQ8IVG5 1584 aa36.4■■■■□ 3.42
PMS2CL-201ENST00000348899 CCNB3Q8WWL7 1395 aa36.37■■■■□ 3.41
PMS2CL-201ENST00000348899 CFDP1Q9UEE9 299 aaPredicted RBP36.36■■■■□ 3.41
PMS2CL-201ENST00000348899 KIDINS220Q9ULH0 1771 aa36.35■■■■□ 3.41
PMS2CL-201ENST00000348899 AGLP35573 1532 aa36.35■■■■□ 3.41
PMS2CL-201ENST00000348899 KIAA1107Q9UPP5 1409 aa36.34■■■■□ 3.41
PMS2CL-201ENST00000348899 SYCP2Q9BX26 1530 aa36.34■■■■□ 3.41
PMS2CL-201ENST00000348899 HNRNPMP52272 730 aaKnown RBP eCLIP36.33■■■■□ 3.41
PMS2CL-201ENST00000348899 HSPA2P54652 639 aa36.32■■■■□ 3.4
PMS2CL-201ENST00000348899 CEBPAP49715 358 aaPredicted RBP36.31■■■■□ 3.4
PMS2CL-201ENST00000348899 PLEKHH2Q8IVE3 1493 aa36.3■■■■□ 3.4
PMS2CL-201ENST00000348899 EHBP1L1Q8N3D4 1523 aa36.29■■■■□ 3.4
PMS2CL-201ENST00000348899 SPAG9O60271 1321 aaKnown RBP36.27■■■■□ 3.4
PMS2CL-201ENST00000348899 TIAM1Q13009 1591 aa36.23■■■■□ 3.39
PMS2CL-201ENST00000348899 LOC105371045A0A1W2PR82 267 aa36.22■■■■□ 3.39
PMS2CL-201ENST00000348899 ZNF644Q9H582 1327 aaPredicted RBP36.18■■■■□ 3.38
PMS2CL-201ENST00000348899 ATP7AQ04656 1500 aa36.17■■■■□ 3.38
PMS2CL-201ENST00000348899 PREX1Q8TCU6 1659 aa36.15■■■■□ 3.38
PMS2CL-201ENST00000348899 INO80Q9ULG1 1556 aaPredicted RBP36.15■■■■□ 3.38
PMS2CL-201ENST00000348899 ESF1Q9H501 851 aaKnown RBP36.14■■■■□ 3.38
PMS2CL-201ENST00000348899 MBD5Q9P267 1494 aa36.13■■■■□ 3.37
PMS2CL-201ENST00000348899 CNTLNQ9NXG0 1405 aa36.11■■■■□ 3.37
PMS2CL-201ENST00000348899 NCOA2Q15596 1464 aa36.09■■■■□ 3.37
PMS2CL-201ENST00000348899 C3P01024 1663 aa36.09■■■■□ 3.37
PMS2CL-201ENST00000348899 VPS8Q8N3P4 1428 aa36.08■■■■□ 3.37
PMS2CL-201ENST00000348899 PLXNC1O60486 1568 aa36.08■■■■□ 3.37
PMS2CL-201ENST00000348899 A2MP01023 1474 aa36.08■■■■□ 3.37
PMS2CL-201ENST00000348899 UHRF1BP1Q6BDS2 1440 aa36.08■■■■□ 3.37
PMS2CL-201ENST00000348899 SETD1BQ9UPS6 1966 aaKnown RBP36.07■■■■□ 3.37
PMS2CL-201ENST00000348899 FBXO41Q8TF61 875 aa36.06■■■■□ 3.36
PMS2CL-201ENST00000348899 SUPT6HQ7KZ85 1726 aaKnown RBP36.03■■■■□ 3.36
PMS2CL-201ENST00000348899 RTEL1-TNFRSF6BF6WH68 1400 aa36.01■■■■□ 3.36
PMS2CL-201ENST00000348899 ZMYM3Q14202 1370 aa35.97■■■■□ 3.35
PMS2CL-201ENST00000348899 LRRC9Q6ZRR7 1453 aa35.97■■■■□ 3.35
PMS2CL-201ENST00000348899 MROH2AA6NES4 1674 aa35.95■■■■□ 3.35
PMS2CL-201ENST00000348899 CAMSAP2Q08AD1 1489 aa35.95■■■■□ 3.35
PMS2CL-201ENST00000348899 ADGBQ8N7X0 1667 aa35.94■■■■□ 3.34
PMS2CL-201ENST00000348899 RSPH4AQ5TD94 716 aa35.94■■■■□ 3.34
PMS2CL-201ENST00000348899 NPATQ14207 1427 aa35.93■■■■□ 3.34
PMS2CL-201ENST00000348899 CCDC141Q6ZP82 1450 aa35.92■■■■□ 3.34
PMS2CL-201ENST00000348899 GGT6Q6P531 493 aa35.91■■■■□ 3.34
PMS2CL-201ENST00000348899 PPP6R1Q9UPN7 881 aa35.91■■■■□ 3.34
PMS2CL-201ENST00000348899 MAP3K1Q13233 1512 aa35.91■■■■□ 3.34
PMS2CL-201ENST00000348899 DHX29Q7Z478 1369 aaKnown RBP35.89■■■■□ 3.34
PMS2CL-201ENST00000348899 STRCQ7RTU9 1775 aa35.89■■■■□ 3.34
PMS2CL-201ENST00000348899 DMRT2Q9Y5R5 561 aa35.89■■■■□ 3.34
PMS2CL-201ENST00000348899 KANK4Q5T7N3 995 aaPredicted RBP35.87■■■■□ 3.33
PMS2CL-201ENST00000348899 CLTCQ00610 1675 aaKnown RBP35.84■■■■□ 3.33
PMS2CL-201ENST00000348899 ARHGEF5Q12774 1597 aa35.82■■■■□ 3.32
PMS2CL-201ENST00000348899 CERKQ8TCT0 537 aa35.82■■■■□ 3.32
PMS2CL-201ENST00000348899 PTPRKQ15262 1439 aa35.8■■■■□ 3.32
PMS2CL-201ENST00000348899 PTPRTO14522 1441 aa35.77■■■■□ 3.32
PMS2CL-201ENST00000348899 TSPY4P0CV99 314 aa35.76■■■■□ 3.32
PMS2CL-201ENST00000348899 TSPY10P0CW01 314 aa35.76■■■■□ 3.32
PMS2CL-201ENST00000348899 NCOA1Q15788 1441 aa35.75■■■■□ 3.31
PMS2CL-201ENST00000348899 KIF3BO15066 747 aa35.75■■■■□ 3.31
PMS2CL-201ENST00000348899 MIA2Q96PC5 1412 aa35.73■■■■□ 3.31
PMS2CL-201ENST00000348899 MYOM3Q5VTT5 1437 aa35.72■■■■□ 3.31
PMS2CL-201ENST00000348899 CAMSAP1Q5T5Y3 1602 aa35.67■■■■□ 3.3
PMS2CL-201ENST00000348899 MYO3AQ8NEV4 1616 aa35.65■■■■□ 3.3
PMS2CL-201ENST00000348899 FAM135AQ9P2D6 1515 aa35.65■■■■□ 3.3
PMS2CL-201ENST00000348899 MAST1Q9Y2H9 1570 aa35.64■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms