RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 ARHGAP5Q13017 1502 aa19.84■□□□□ 0.77
ERGIC3-202ENST00000348547 CCNB3Q8WWL7 1395 aa19.84■□□□□ 0.77
ERGIC3-202ENST00000348547 TRHP20396 242 aaPredicted RBP19.83■□□□□ 0.76
ERGIC3-202ENST00000348547 FANCAO15360 1455 aa19.81■□□□□ 0.76
ERGIC3-202ENST00000348547 FGD6Q6ZV73 1430 aa19.81■□□□□ 0.76
ERGIC3-202ENST00000348547 ARHGEF12Q9NZN5 1544 aa19.81■□□□□ 0.76
ERGIC3-202ENST00000348547 ABCC1P33527 1531 aa19.8■□□□□ 0.76
ERGIC3-202ENST00000348547 ZNF644Q9H582 1327 aaPredicted RBP19.8■□□□□ 0.76
ERGIC3-202ENST00000348547 PTPN23Q9H3S7 1636 aa19.8■□□□□ 0.76
ERGIC3-202ENST00000348547 CAMSAP2Q08AD1 1489 aa19.78■□□□□ 0.76
ERGIC3-202ENST00000348547 CFAP74Q9C0B2 1584 aa19.78■□□□□ 0.76
ERGIC3-202ENST00000348547 COL17A1Q9UMD9 1497 aaPredicted RBP19.77■□□□□ 0.76
ERGIC3-202ENST00000348547 FRMPD1Q5SYB0 1578 aa19.77■□□□□ 0.76
ERGIC3-202ENST00000348547 TCOF1Q13428 1488 aaKnown RBP19.77■□□□□ 0.75
ERGIC3-202ENST00000348547 NEO1Q92859 1461 aa19.76■□□□□ 0.75
ERGIC3-202ENST00000348547 SYCP2Q9BX26 1530 aa19.75■□□□□ 0.75
ERGIC3-202ENST00000348547 MIA2Q96PC5 1412 aa19.75■□□□□ 0.75
ERGIC3-202ENST00000348547 RICTORQ6R327 1708 aa19.74■□□□□ 0.75
ERGIC3-202ENST00000348547 AKNAQ7Z591 1439 aa19.74■□□□□ 0.75
ERGIC3-202ENST00000348547 RRBP1Q9P2E9 1410 aaKnown RBP19.74■□□□□ 0.75
ERGIC3-202ENST00000348547 TEX14Q8IWB6 1497 aa19.73■□□□□ 0.75
ERGIC3-202ENST00000348547 MBD5Q9P267 1494 aa19.73■□□□□ 0.75
ERGIC3-202ENST00000348547 CFDP1Q9UEE9 299 aaPredicted RBP19.72■□□□□ 0.75
ERGIC3-202ENST00000348547 ADGRL1O94910 1474 aa19.71■□□□□ 0.75
ERGIC3-202ENST00000348547 EFCAB2Q5VUJ9 269 aa19.7■□□□□ 0.74
ERGIC3-202ENST00000348547 CROCC2H7BZ55 1655 aa19.69■□□□□ 0.74
ERGIC3-202ENST00000348547 TRAPPC8Q9Y2L5 1435 aa19.69■□□□□ 0.74
ERGIC3-202ENST00000348547 ZNF777Q9ULD5 760 aaPredicted RBP19.68■□□□□ 0.74
ERGIC3-202ENST00000348547 ARHGEF5Q12774 1597 aa19.67■□□□□ 0.74
ERGIC3-202ENST00000348547 DNMT1P26358 1616 aaKnown RBP19.67■□□□□ 0.74
ERGIC3-202ENST00000348547 POGZQ7Z3K3 1410 aa19.66■□□□□ 0.74
ERGIC3-202ENST00000348547 SCAPERQ9BY12 1400 aa19.66■□□□□ 0.74
ERGIC3-202ENST00000348547 KIAA1107Q9UPP5 1409 aa19.66■□□□□ 0.74
ERGIC3-202ENST00000348547 KDM5CP41229 1560 aa19.65■□□□□ 0.74
ERGIC3-202ENST00000348547 PTPRKQ15262 1439 aa19.65■□□□□ 0.74
ERGIC3-202ENST00000348547 KDM6BO15054 1643 aa19.64■□□□□ 0.73
ERGIC3-202ENST00000348547 HNRNPMP52272 730 aaKnown RBP eCLIP19.63■□□□□ 0.73
ERGIC3-202ENST00000348547 PLEKHH2Q8IVE3 1493 aa19.63■□□□□ 0.73
ERGIC3-202ENST00000348547 INO80Q9ULG1 1556 aaPredicted RBP19.62■□□□□ 0.73
ERGIC3-202ENST00000348547 ABCC5O15440 1437 aa19.62■□□□□ 0.73
ERGIC3-202ENST00000348547 ZMYM4Q5VZL5 1548 aa19.61■□□□□ 0.73
ERGIC3-202ENST00000348547 DENND4BO75064 1496 aaPredicted RBP19.61■□□□□ 0.73
ERGIC3-202ENST00000348547 KIDINS220Q9ULH0 1771 aa19.61■□□□□ 0.73
ERGIC3-202ENST00000348547 RAPGEF3O95398 923 aa19.6■□□□□ 0.73
ERGIC3-202ENST00000348547 ZFYVE16Q7Z3T8 1539 aa19.6■□□□□ 0.73
ERGIC3-202ENST00000348547 CCDC141Q6ZP82 1450 aa19.6■□□□□ 0.73
ERGIC3-202ENST00000348547 DAPK1P53355 1430 aa19.6■□□□□ 0.73
ERGIC3-202ENST00000348547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.6■□□□□ 0.73
ERGIC3-202ENST00000348547 AFAP1Q8N556 730 aa19.58■□□□□ 0.73
ERGIC3-202ENST00000348547 MAST1Q9Y2H9 1570 aa19.58■□□□□ 0.72
ERGIC3-202ENST00000348547 FAM50AQ14320 339 aaKnown RBP19.57■□□□□ 0.72
ERGIC3-202ENST00000348547 ZNF518AQ6AHZ1 1483 aa19.57■□□□□ 0.72
ERGIC3-202ENST00000348547 ABCA6Q8N139 1617 aa19.57■□□□□ 0.72
ERGIC3-202ENST00000348547 SIGLEC1Q9BZZ2 1709 aa19.57■□□□□ 0.72
ERGIC3-202ENST00000348547 HECW2Q9P2P5 1572 aa19.56■□□□□ 0.72
ERGIC3-202ENST00000348547 SHANK2Q9UPX8 1470 aa19.55■□□□□ 0.72
ERGIC3-202ENST00000348547 ADGBQ8N7X0 1667 aa19.54■□□□□ 0.72
ERGIC3-202ENST00000348547 ATP7AQ04656 1500 aa19.54■□□□□ 0.72
ERGIC3-202ENST00000348547 YEATS2Q9ULM3 1422 aa19.53■□□□□ 0.72
ERGIC3-202ENST00000348547 DIP2CQ9Y2E4 1556 aa19.52■□□□□ 0.72
ERGIC3-202ENST00000348547 C9orf84Q5VXU9 1444 aa19.52■□□□□ 0.72
ERGIC3-202ENST00000348547 MLH3Q9UHC1 1453 aa19.52■□□□□ 0.71
ERGIC3-202ENST00000348547 ARHGEF40Q8TER5 1519 aa19.51■□□□□ 0.71
ERGIC3-202ENST00000348547 PLXNC1O60486 1568 aa19.51■□□□□ 0.71
ERGIC3-202ENST00000348547 ADGRL2O95490 1459 aa19.49■□□□□ 0.71
ERGIC3-202ENST00000348547 ITGAEP38570 1179 aa19.46■□□□□ 0.71
ERGIC3-202ENST00000348547 SPAG9O60271 1321 aaKnown RBP19.45■□□□□ 0.7
ERGIC3-202ENST00000348547 RTEL1-TNFRSF6BF6WH68 1400 aa19.45■□□□□ 0.7
ERGIC3-202ENST00000348547 CHIC2Q9UKJ5 165 aa19.44■□□□□ 0.7
ERGIC3-202ENST00000348547 NCOA1Q15788 1441 aa19.44■□□□□ 0.7
ERGIC3-202ENST00000348547 MAGI2Q86UL8 1455 aa19.44■□□□□ 0.7
ERGIC3-202ENST00000348547 GCC2Q8IWJ2 1684 aa19.43■□□□□ 0.7
ERGIC3-202ENST00000348547 RSPH4AQ5TD94 716 aa19.41■□□□□ 0.7
ERGIC3-202ENST00000348547 ROCK1Q13464 1354 aa19.4■□□□□ 0.7
ERGIC3-202ENST00000348547 REREQ9P2R6 1566 aa19.4■□□□□ 0.7
ERGIC3-202ENST00000348547 NAIPQ13075 1403 aa19.38■□□□□ 0.69
ERGIC3-202ENST00000348547 KIF15Q9NS87 1388 aa19.38■□□□□ 0.69
ERGIC3-202ENST00000348547 TRIM26Q12899 539 aaPredicted RBP19.38■□□□□ 0.69
ERGIC3-202ENST00000348547 ATP10AO60312 1499 aa19.37■□□□□ 0.69
ERGIC3-202ENST00000348547 BCORL1Q5H9F3 1711 aa19.36■□□□□ 0.69
ERGIC3-202ENST00000348547 A2MP01023 1474 aa19.36■□□□□ 0.69
ERGIC3-202ENST00000348547 MROH1Q8NDA8 1641 aa19.35■□□□□ 0.69
ERGIC3-202ENST00000348547 TSPY4P0CV99 314 aa19.35■□□□□ 0.69
ERGIC3-202ENST00000348547 TSPY10P0CW01 314 aa19.35■□□□□ 0.69
ERGIC3-202ENST00000348547 RRP7BPQ9NSQ0 103 aa19.35■□□□□ 0.69
ERGIC3-202ENST00000348547 DUOX2Q9NRD8 1548 aa19.35■□□□□ 0.69
ERGIC3-202ENST00000348547 HFM1A2PYH4 1435 aa19.35■□□□□ 0.69
ERGIC3-202ENST00000348547 ANKRD30AQ9BXX3 1397 aa19.35■□□□□ 0.69
ERGIC3-202ENST00000348547 EIF2AK4Q9P2K8 1649 aaKnown RBP19.32■□□□□ 0.68
ERGIC3-202ENST00000348547 DEPDC5O75140 1603 aa19.31■□□□□ 0.68
ERGIC3-202ENST00000348547 RNF17Q9BXT8 1623 aaKnown RBP19.31■□□□□ 0.68
ERGIC3-202ENST00000348547 AGLP35573 1532 aa19.3■□□□□ 0.68
ERGIC3-202ENST00000348547 DHX29Q7Z478 1369 aaKnown RBP19.3■□□□□ 0.68
ERGIC3-202ENST00000348547 ERBINQ96RT1 1412 aa19.28■□□□□ 0.68
ERGIC3-202ENST00000348547 ANKRD50Q9ULJ7 1429 aa19.28■□□□□ 0.68
ERGIC3-202ENST00000348547 UNC13BO14795 1591 aa19.28■□□□□ 0.68
ERGIC3-202ENST00000348547 MYT1LQ9UL68 1186 aa19.26■□□□□ 0.67
ERGIC3-202ENST00000348547 PCGF6Q9BYE7 350 aa19.24■□□□□ 0.67
ERGIC3-202ENST00000348547 PRDM15P57071 1507 aaPredicted RBP19.23■□□□□ 0.67
ERGIC3-202ENST00000348547 SETD5Q9C0A6 1442 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms