RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 SIGLEC1Q9BZZ2 1709 aa25.84■■□□□ 1.73
RAB5C-201ENST00000346213 POGZQ7Z3K3 1410 aa25.83■■□□□ 1.73
RAB5C-201ENST00000346213 YEATS2Q9ULM3 1422 aa25.83■■□□□ 1.73
RAB5C-201ENST00000346213 ARHGAP5Q13017 1502 aa25.83■■□□□ 1.73
RAB5C-201ENST00000346213 ZMYM4Q5VZL5 1548 aa25.83■■□□□ 1.72
RAB5C-201ENST00000346213 ARHGEF12Q9NZN5 1544 aa25.82■■□□□ 1.72
RAB5C-201ENST00000346213 CDC42BPAQ5VT25 1732 aa25.82■■□□□ 1.72
RAB5C-201ENST00000346213 ARHGEF40Q8TER5 1519 aa25.81■■□□□ 1.72
RAB5C-201ENST00000346213 VPS8Q8N3P4 1428 aa25.79■■□□□ 1.72
RAB5C-201ENST00000346213 GPATCH8Q9UKJ3 1502 aaKnown RBP25.77■■□□□ 1.72
RAB5C-201ENST00000346213 EFCAB2Q5VUJ9 269 aa25.77■■□□□ 1.72
RAB5C-201ENST00000346213 ABCC1P33527 1531 aa25.76■■□□□ 1.71
RAB5C-201ENST00000346213 SAMD9LQ8IVG5 1584 aa25.73■■□□□ 1.71
RAB5C-201ENST00000346213 TRAPPC8Q9Y2L5 1435 aa25.73■■□□□ 1.71
RAB5C-201ENST00000346213 EHBP1L1Q8N3D4 1523 aa25.72■■□□□ 1.71
RAB5C-201ENST00000346213 MTUS2Q5JR59 1369 aa25.72■■□□□ 1.71
RAB5C-201ENST00000346213 KDM5CP41229 1560 aa25.72■■□□□ 1.71
RAB5C-201ENST00000346213 TIAM1Q13009 1591 aa25.72■■□□□ 1.71
RAB5C-201ENST00000346213 ZFYVE16Q7Z3T8 1539 aa25.72■■□□□ 1.71
RAB5C-201ENST00000346213 AFAP1Q8N556 730 aa25.71■■□□□ 1.71
RAB5C-201ENST00000346213 ITSN2Q9NZM3 1697 aa25.69■■□□□ 1.7
RAB5C-201ENST00000346213 ADAMTSL3P82987 1691 aa25.67■■□□□ 1.7
RAB5C-201ENST00000346213 ZNF518AQ6AHZ1 1483 aa25.65■■□□□ 1.7
RAB5C-201ENST00000346213 MAGI2Q86UL8 1455 aa25.65■■□□□ 1.7
RAB5C-201ENST00000346213 SYCP2Q9BX26 1530 aa25.65■■□□□ 1.7
RAB5C-201ENST00000346213 BCORL1Q5H9F3 1711 aa25.64■■□□□ 1.7
RAB5C-201ENST00000346213 KANK4Q5T7N3 995 aaPredicted RBP25.63■■□□□ 1.69
RAB5C-201ENST00000346213 NCOA2Q15596 1464 aa25.62■■□□□ 1.69
RAB5C-201ENST00000346213 CCNB3Q8WWL7 1395 aa25.61■■□□□ 1.69
RAB5C-201ENST00000346213 ZNF644Q9H582 1327 aaPredicted RBP25.61■■□□□ 1.69
RAB5C-201ENST00000346213 ABCA6Q8N139 1617 aa25.61■■□□□ 1.69
RAB5C-201ENST00000346213 DIP2CQ9Y2E4 1556 aa25.61■■□□□ 1.69
RAB5C-201ENST00000346213 LRRC9Q6ZRR7 1453 aa25.61■■□□□ 1.69
RAB5C-201ENST00000346213 HECW2Q9P2P5 1572 aa25.6■■□□□ 1.69
RAB5C-201ENST00000346213 ZNF777Q9ULD5 760 aaPredicted RBP25.6■■□□□ 1.69
RAB5C-201ENST00000346213 MADDQ8WXG6 1647 aa25.6■■□□□ 1.69
RAB5C-201ENST00000346213 ATP10AO60312 1499 aa25.56■■□□□ 1.68
RAB5C-201ENST00000346213 MLH3Q9UHC1 1453 aa25.56■■□□□ 1.68
RAB5C-201ENST00000346213 KIDINS220Q9ULH0 1771 aa25.56■■□□□ 1.68
RAB5C-201ENST00000346213 HNRNPMP52272 730 aaKnown RBP eCLIP25.56■■□□□ 1.68
RAB5C-201ENST00000346213 CFDP1Q9UEE9 299 aaPredicted RBP25.55■■□□□ 1.68
RAB5C-201ENST00000346213 SUPT6HQ7KZ85 1726 aaKnown RBP25.54■■□□□ 1.68
RAB5C-201ENST00000346213 ARID4BQ4LE39 1312 aaPredicted RBP25.54■■□□□ 1.68
RAB5C-201ENST00000346213 C9orf84Q5VXU9 1444 aa25.53■■□□□ 1.68
RAB5C-201ENST00000346213 MAP3K1Q13233 1512 aa25.53■■□□□ 1.68
RAB5C-201ENST00000346213 PTPRMP28827 1452 aa25.53■■□□□ 1.68
RAB5C-201ENST00000346213 MBD5Q9P267 1494 aa25.52■■□□□ 1.68
RAB5C-201ENST00000346213 KIAA1107Q9UPP5 1409 aa25.51■■□□□ 1.67
RAB5C-201ENST00000346213 INO80Q9ULG1 1556 aaPredicted RBP25.48■■□□□ 1.67
RAB5C-201ENST00000346213 RIMS1Q86UR5 1692 aaKnown RBP25.48■■□□□ 1.67
RAB5C-201ENST00000346213 REREQ9P2R6 1566 aa25.47■■□□□ 1.67
RAB5C-201ENST00000346213 MLECQ14165 292 aa25.46■■□□□ 1.67
RAB5C-201ENST00000346213 CAMSAP2Q08AD1 1489 aa25.46■■□□□ 1.67
RAB5C-201ENST00000346213 PLEKHH2Q8IVE3 1493 aa25.44■■□□□ 1.66
RAB5C-201ENST00000346213 ATP7AQ04656 1500 aa25.43■■□□□ 1.66
RAB5C-201ENST00000346213 SPAG9O60271 1321 aaKnown RBP25.39■■□□□ 1.66
RAB5C-201ENST00000346213 MYT1LQ9UL68 1186 aa25.39■■□□□ 1.66
RAB5C-201ENST00000346213 AGLP35573 1532 aa25.38■■□□□ 1.65
RAB5C-201ENST00000346213 FER1L4A9Z1Z3 1794 aa25.38■■□□□ 1.65
RAB5C-201ENST00000346213 PLXNC1O60486 1568 aa25.38■■□□□ 1.65
RAB5C-201ENST00000346213 MYOM3Q5VTT5 1437 aa25.35■■□□□ 1.65
RAB5C-201ENST00000346213 CCDC141Q6ZP82 1450 aa25.33■■□□□ 1.64
RAB5C-201ENST00000346213 PLPPR3Q6T4P5 718 aa25.3■■□□□ 1.64
RAB5C-201ENST00000346213 ARHGEF5Q12774 1597 aa25.3■■□□□ 1.64
RAB5C-201ENST00000346213 A2MP01023 1474 aa25.29■■□□□ 1.64
RAB5C-201ENST00000346213 ADGBQ8N7X0 1667 aa25.29■■□□□ 1.64
RAB5C-201ENST00000346213 LMTK3Q96Q04 1460 aa25.28■■□□□ 1.64
RAB5C-201ENST00000346213 CEBPAP49715 358 aaPredicted RBP25.28■■□□□ 1.64
RAB5C-201ENST00000346213 RTEL1-TNFRSF6BF6WH68 1400 aa25.26■■□□□ 1.63
RAB5C-201ENST00000346213 MIA2Q96PC5 1412 aa25.25■■□□□ 1.63
RAB5C-201ENST00000346213 FGD6Q6ZV73 1430 aa25.21■■□□□ 1.63
RAB5C-201ENST00000346213 PTPN23Q9H3S7 1636 aa25.2■■□□□ 1.63
RAB5C-201ENST00000346213 C3P01024 1663 aa25.19■■□□□ 1.62
RAB5C-201ENST00000346213 MAST1Q9Y2H9 1570 aa25.18■■□□□ 1.62
RAB5C-201ENST00000346213 TCOF1Q13428 1488 aaKnown RBP25.18■■□□□ 1.62
RAB5C-201ENST00000346213 APLP2Q06481 763 aa25.18■■□□□ 1.62
RAB5C-201ENST00000346213 DHX29Q7Z478 1369 aaKnown RBP25.17■■□□□ 1.62
RAB5C-201ENST00000346213 ABCC5O15440 1437 aa25.17■■□□□ 1.62
RAB5C-201ENST00000346213 HSPA2P54652 639 aa25.13■■□□□ 1.61
RAB5C-201ENST00000346213 CROCC2H7BZ55 1655 aa25.12■■□□□ 1.61
RAB5C-201ENST00000346213 CLTCQ00610 1675 aaKnown RBP25.12■■□□□ 1.61
RAB5C-201ENST00000346213 RSPH4AQ5TD94 716 aa25.11■■□□□ 1.61
RAB5C-201ENST00000346213 PPARGC1BQ86YN6 1023 aaKnown RBP25.11■■□□□ 1.61
RAB5C-201ENST00000346213 GGT6Q6P531 493 aa25.1■■□□□ 1.61
RAB5C-201ENST00000346213 DNMT1P26358 1616 aaKnown RBP25.1■■□□□ 1.61
RAB5C-201ENST00000346213 DAPK1P53355 1430 aa25.09■■□□□ 1.61
RAB5C-201ENST00000346213 MROH2AA6NES4 1674 aa25.07■■□□□ 1.6
RAB5C-201ENST00000346213 CNTLNQ9NXG0 1405 aa25.06■■□□□ 1.6
RAB5C-201ENST00000346213 TSPY4P0CV99 314 aa25.06■■□□□ 1.6
RAB5C-201ENST00000346213 TSPY10P0CW01 314 aa25.06■■□□□ 1.6
RAB5C-201ENST00000346213 ZMYM3Q14202 1370 aa25.06■■□□□ 1.6
RAB5C-201ENST00000346213 SHANK2Q9UPX8 1470 aa25.06■■□□□ 1.6
RAB5C-201ENST00000346213 MROH1Q8NDA8 1641 aa25.05■■□□□ 1.6
RAB5C-201ENST00000346213 PREX1Q8TCU6 1659 aa25.05■■□□□ 1.6
RAB5C-201ENST00000346213 KIF3BO15066 747 aa25.05■■□□□ 1.6
RAB5C-201ENST00000346213 PTPRKQ15262 1439 aa25.01■■□□□ 1.59
RAB5C-201ENST00000346213 RNF17Q9BXT8 1623 aaKnown RBP25.01■■□□□ 1.59
RAB5C-201ENST00000346213 KIF15Q9NS87 1388 aa24.99■■□□□ 1.59
RAB5C-201ENST00000346213 CHIC2Q9UKJ5 165 aa24.97■■□□□ 1.59
RAB5C-201ENST00000346213 KDM5DQ9BY66 1539 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms