RNA–Protein interactions for RNA: ENST00000345165.8

CCDC78-202, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC78, Length 1,055 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-202ENST00000345165 CDC42BPAQ5VT25 1732 aa30.25■■■□□ 2.43
CCDC78-202ENST00000345165 EHBP1L1Q8N3D4 1523 aa30.25■■■□□ 2.43
CCDC78-202ENST00000345165 MAGI2Q86UL8 1455 aa30.25■■■□□ 2.43
CCDC78-202ENST00000345165 POGZQ7Z3K3 1410 aa30.24■■■□□ 2.43
CCDC78-202ENST00000345165 RAPGEF3O95398 923 aa30.24■■■□□ 2.43
CCDC78-202ENST00000345165 ARHGEF40Q8TER5 1519 aa30.23■■■□□ 2.43
CCDC78-202ENST00000345165 AEBP2Q6ZN18 517 aaPredicted RBP30.22■■■□□ 2.43
CCDC78-202ENST00000345165 SCAPERQ9BY12 1400 aa30.21■■■□□ 2.43
CCDC78-202ENST00000345165 MTUS2Q5JR59 1369 aa30.2■■■□□ 2.43
CCDC78-202ENST00000345165 KDM4FA0A1W2PPD8 638 aa30.19■■■□□ 2.42
CCDC78-202ENST00000345165 ZNF518AQ6AHZ1 1483 aa30.18■■■□□ 2.42
CCDC78-202ENST00000345165 MAP3K1Q13233 1512 aa30.17■■■□□ 2.42
CCDC78-202ENST00000345165 TIAM1Q13009 1591 aa30.16■■■□□ 2.42
CCDC78-202ENST00000345165 ABCC1P33527 1531 aa30.16■■■□□ 2.42
CCDC78-202ENST00000345165 KDM5CP41229 1560 aa30.15■■■□□ 2.42
CCDC78-202ENST00000345165 GPATCH8Q9UKJ3 1502 aaKnown RBP30.14■■■□□ 2.42
CCDC78-202ENST00000345165 ZFYVE16Q7Z3T8 1539 aa30.12■■■□□ 2.41
CCDC78-202ENST00000345165 ITSN2Q9NZM3 1697 aa30.11■■■□□ 2.41
CCDC78-202ENST00000345165 SUPT6HQ7KZ85 1726 aaKnown RBP30.08■■■□□ 2.41
CCDC78-202ENST00000345165 CCNB3Q8WWL7 1395 aa30.06■■■□□ 2.4
CCDC78-202ENST00000345165 PLEKHH2Q8IVE3 1493 aa30.06■■■□□ 2.4
CCDC78-202ENST00000345165 SAMD9LQ8IVG5 1584 aa30.05■■■□□ 2.4
CCDC78-202ENST00000345165 HECW2Q9P2P5 1572 aa30.04■■■□□ 2.4
CCDC78-202ENST00000345165 KIAA1107Q9UPP5 1409 aa30.03■■■□□ 2.4
CCDC78-202ENST00000345165 MLH3Q9UHC1 1453 aa30.02■■■□□ 2.4
CCDC78-202ENST00000345165 BCORL1Q5H9F3 1711 aa30.02■■■□□ 2.4
CCDC78-202ENST00000345165 ADAMTSL3P82987 1691 aa30.01■■■□□ 2.4
CCDC78-202ENST00000345165 LRRC9Q6ZRR7 1453 aa30.01■■■□□ 2.4
CCDC78-202ENST00000345165 YEATS2Q9ULM3 1422 aa30.01■■■□□ 2.39
CCDC78-202ENST00000345165 ARHGEF12Q9NZN5 1544 aa30.01■■■□□ 2.39
CCDC78-202ENST00000345165 REREQ9P2R6 1566 aa29.98■■■□□ 2.39
CCDC78-202ENST00000345165 NCOA2Q15596 1464 aa29.98■■■□□ 2.39
CCDC78-202ENST00000345165 ATP10AO60312 1499 aa29.97■■■□□ 2.39
CCDC78-202ENST00000345165 CFDP1Q9UEE9 299 aaPredicted RBP29.96■■■□□ 2.39
CCDC78-202ENST00000345165 C9orf84Q5VXU9 1444 aa29.96■■■□□ 2.39
CCDC78-202ENST00000345165 SYCP2Q9BX26 1530 aa29.95■■■□□ 2.38
CCDC78-202ENST00000345165 TRAPPC8Q9Y2L5 1435 aa29.95■■■□□ 2.38
CCDC78-202ENST00000345165 AFAP1Q8N556 730 aa29.93■■■□□ 2.38
CCDC78-202ENST00000345165 DIP2CQ9Y2E4 1556 aa29.92■■■□□ 2.38
CCDC78-202ENST00000345165 SIGLEC1Q9BZZ2 1709 aa29.91■■■□□ 2.38
CCDC78-202ENST00000345165 KIDINS220Q9ULH0 1771 aa29.9■■■□□ 2.38
CCDC78-202ENST00000345165 ABCA6Q8N139 1617 aa29.89■■■□□ 2.37
CCDC78-202ENST00000345165 INO80Q9ULG1 1556 aaPredicted RBP29.86■■■□□ 2.37
CCDC78-202ENST00000345165 ZNF777Q9ULD5 760 aaPredicted RBP29.84■■■□□ 2.37
CCDC78-202ENST00000345165 ARID4BQ4LE39 1312 aaPredicted RBP29.84■■■□□ 2.37
CCDC78-202ENST00000345165 AGLP35573 1532 aa29.84■■■□□ 2.37
CCDC78-202ENST00000345165 MADDQ8WXG6 1647 aa29.84■■■□□ 2.37
CCDC78-202ENST00000345165 MBD5Q9P267 1494 aa29.83■■■□□ 2.37
CCDC78-202ENST00000345165 ATP7AQ04656 1500 aa29.81■■■□□ 2.36
CCDC78-202ENST00000345165 PTPRMP28827 1452 aa29.8■■■□□ 2.36
CCDC78-202ENST00000345165 CAMSAP2Q08AD1 1489 aa29.79■■■□□ 2.36
CCDC78-202ENST00000345165 MIA2Q96PC5 1412 aa29.78■■■□□ 2.36
CCDC78-202ENST00000345165 APLP2Q06481 763 aa29.77■■■□□ 2.36
CCDC78-202ENST00000345165 ARHGEF5Q12774 1597 aa29.77■■■□□ 2.36
CCDC78-202ENST00000345165 SPAG9O60271 1321 aaKnown RBP29.76■■■□□ 2.36
CCDC78-202ENST00000345165 HNRNPMP52272 730 aaKnown RBP eCLIP29.76■■■□□ 2.35
CCDC78-202ENST00000345165 KANK4Q5T7N3 995 aaPredicted RBP29.76■■■□□ 2.35
CCDC78-202ENST00000345165 RSPH4AQ5TD94 716 aa29.76■■■□□ 2.35
CCDC78-202ENST00000345165 RTEL1-TNFRSF6BF6WH68 1400 aa29.75■■■□□ 2.35
CCDC78-202ENST00000345165 MYOM3Q5VTT5 1437 aa29.75■■■□□ 2.35
CCDC78-202ENST00000345165 FER1L4A9Z1Z3 1794 aa29.75■■■□□ 2.35
CCDC78-202ENST00000345165 CCDC141Q6ZP82 1450 aa29.74■■■□□ 2.35
CCDC78-202ENST00000345165 RIMS1Q86UR5 1692 aaKnown RBP29.72■■■□□ 2.35
CCDC78-202ENST00000345165 PLXNC1O60486 1568 aa29.72■■■□□ 2.35
CCDC78-202ENST00000345165 ADGBQ8N7X0 1667 aa29.72■■■□□ 2.35
CCDC78-202ENST00000345165 ZNF644Q9H582 1327 aaPredicted RBP29.71■■■□□ 2.35
CCDC78-202ENST00000345165 MYT1LQ9UL68 1186 aa29.7■■■□□ 2.35
CCDC78-202ENST00000345165 A2MP01023 1474 aa29.63■■■□□ 2.33
CCDC78-202ENST00000345165 MAST1Q9Y2H9 1570 aa29.62■■■□□ 2.33
CCDC78-202ENST00000345165 CNTLNQ9NXG0 1405 aa29.56■■■□□ 2.32
CCDC78-202ENST00000345165 PTPN23Q9H3S7 1636 aa29.56■■■□□ 2.32
CCDC78-202ENST00000345165 TCOF1Q13428 1488 aaKnown RBP29.55■■■□□ 2.32
CCDC78-202ENST00000345165 FGD6Q6ZV73 1430 aa29.54■■■□□ 2.32
CCDC78-202ENST00000345165 MROH2AA6NES4 1674 aa29.54■■■□□ 2.32
CCDC78-202ENST00000345165 MLECQ14165 292 aa29.54■■■□□ 2.32
CCDC78-202ENST00000345165 SHANK2Q9UPX8 1470 aa29.52■■■□□ 2.32
CCDC78-202ENST00000345165 DHX29Q7Z478 1369 aaKnown RBP29.52■■■□□ 2.32
CCDC78-202ENST00000345165 TSPY4P0CV99 314 aa29.51■■■□□ 2.31
CCDC78-202ENST00000345165 TSPY10P0CW01 314 aa29.51■■■□□ 2.31
CCDC78-202ENST00000345165 FAM135AQ9P2D6 1515 aa29.5■■■□□ 2.31
CCDC78-202ENST00000345165 CROCC2H7BZ55 1655 aa29.5■■■□□ 2.31
CCDC78-202ENST00000345165 PPP6R1Q9UPN7 881 aa29.49■■■□□ 2.31
CCDC78-202ENST00000345165 DNMT1P26358 1616 aaKnown RBP29.47■■■□□ 2.31
CCDC78-202ENST00000345165 C3P01024 1663 aa29.46■■■□□ 2.31
CCDC78-202ENST00000345165 LMTK3Q96Q04 1460 aa29.45■■■□□ 2.31
CCDC78-202ENST00000345165 SETD1BQ9UPS6 1966 aaKnown RBP29.44■■■□□ 2.3
CCDC78-202ENST00000345165 PREX1Q8TCU6 1659 aa29.43■■■□□ 2.3
CCDC78-202ENST00000345165 EIF2AK4Q9P2K8 1649 aaKnown RBP29.42■■■□□ 2.3
CCDC78-202ENST00000345165 ESF1Q9H501 851 aaKnown RBP29.42■■■□□ 2.3
CCDC78-202ENST00000345165 ABCC5O15440 1437 aa29.39■■■□□ 2.3
CCDC78-202ENST00000345165 DAPK1P53355 1430 aa29.38■■■□□ 2.29
CCDC78-202ENST00000345165 RNF17Q9BXT8 1623 aaKnown RBP29.37■■■□□ 2.29
CCDC78-202ENST00000345165 NPATQ14207 1427 aa29.37■■■□□ 2.29
CCDC78-202ENST00000345165 DUOX2Q9NRD8 1548 aa29.36■■■□□ 2.29
CCDC78-202ENST00000345165 CLTCQ00610 1675 aaKnown RBP29.36■■■□□ 2.29
CCDC78-202ENST00000345165 KDM5DQ9BY66 1539 aa29.32■■■□□ 2.28
CCDC78-202ENST00000345165 ZMYM3Q14202 1370 aa29.3■■■□□ 2.28
CCDC78-202ENST00000345165 ZC3H13Q5T200 1668 aaKnown RBP29.29■■■□□ 2.28
CCDC78-202ENST00000345165 ERBINQ96RT1 1412 aa29.28■■■□□ 2.28
CCDC78-202ENST00000345165 KIF3BO15066 747 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms