RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 CCNB3Q8WWL7 1395 aa11.31□□□□□ -0.6
GDNF-202ENST00000344622 PLEKHD1A6NEE1 506 aa11.31□□□□□ -0.6
GDNF-202ENST00000344622 ITGAEP38570 1179 aa11.3□□□□□ -0.6
GDNF-202ENST00000344622 CAMSAP2Q08AD1 1489 aa11.29□□□□□ -0.6
GDNF-202ENST00000344622 TCOF1Q13428 1488 aaKnown RBP11.29□□□□□ -0.6
GDNF-202ENST00000344622 MBD5Q9P267 1494 aa11.28□□□□□ -0.6
GDNF-202ENST00000344622 ITSN2Q9NZM3 1697 aa11.28□□□□□ -0.6
GDNF-202ENST00000344622 CROCC2H7BZ55 1655 aa11.27□□□□□ -0.61
GDNF-202ENST00000344622 SYCP2Q9BX26 1530 aa11.27□□□□□ -0.61
GDNF-202ENST00000344622 SIGLEC1Q9BZZ2 1709 aa11.25□□□□□ -0.61
GDNF-202ENST00000344622 FAM50AQ14320 339 aaKnown RBP11.25□□□□□ -0.61
GDNF-202ENST00000344622 ZNF777Q9ULD5 760 aaPredicted RBP11.25□□□□□ -0.61
GDNF-202ENST00000344622 ABCC5O15440 1437 aa11.25□□□□□ -0.61
GDNF-202ENST00000344622 COL17A1Q9UMD9 1497 aaPredicted RBP11.25□□□□□ -0.61
GDNF-202ENST00000344622 DNMT1P26358 1616 aaKnown RBP11.25□□□□□ -0.61
GDNF-202ENST00000344622 HNRNPMP52272 730 aaKnown RBP eCLIP11.25□□□□□ -0.61
GDNF-202ENST00000344622 PLCH2O75038 1416 aa11.25□□□□□ -0.61
GDNF-202ENST00000344622 ARHGAP5Q13017 1502 aa11.24□□□□□ -0.61
GDNF-202ENST00000344622 TRAPPC8Q9Y2L5 1435 aa11.23□□□□□ -0.61
GDNF-202ENST00000344622 CHIC2Q9UKJ5 165 aa11.23□□□□□ -0.61
GDNF-202ENST00000344622 ABCC1P33527 1531 aa11.23□□□□□ -0.61
GDNF-202ENST00000344622 FRMPD1Q5SYB0 1578 aa11.22□□□□□ -0.61
GDNF-202ENST00000344622 CFDP1Q9UEE9 299 aaPredicted RBP11.22□□□□□ -0.61
GDNF-202ENST00000344622 DAPK1P53355 1430 aa11.22□□□□□ -0.61
GDNF-202ENST00000344622 MIA2Q96PC5 1412 aa11.22□□□□□ -0.61
GDNF-202ENST00000344622 CDK11AQ9UQ88 783 aaPredicted RBP11.21□□□□□ -0.61
GDNF-202ENST00000344622 FANCAO15360 1455 aa11.21□□□□□ -0.61
GDNF-202ENST00000344622 GLI2P10070 1586 aa11.21□□□□□ -0.62
GDNF-202ENST00000344622 FAM69CQ0P6D2 419 aa11.21□□□□□ -0.62
GDNF-202ENST00000344622 DENND4BO75064 1496 aaPredicted RBP11.2□□□□□ -0.62
GDNF-202ENST00000344622 CD109Q6YHK3 1445 aa11.2□□□□□ -0.62
GDNF-202ENST00000344622 AFAP1Q8N556 730 aa11.2□□□□□ -0.62
GDNF-202ENST00000344622 RICTORQ6R327 1708 aa11.19□□□□□ -0.62
GDNF-202ENST00000344622 KIDINS220Q9ULH0 1771 aa11.18□□□□□ -0.62
GDNF-202ENST00000344622 NAIPQ13075 1403 aa11.17□□□□□ -0.62
GDNF-202ENST00000344622 RAPGEF3O95398 923 aa11.17□□□□□ -0.62
GDNF-202ENST00000344622 RRP7BPQ9NSQ0 103 aa11.17□□□□□ -0.62
GDNF-202ENST00000344622 NPM1P06748 294 aaKnown RBP eCLIP11.16□□□□□ -0.62
GDNF-202ENST00000344622 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.16□□□□□ -0.62
GDNF-202ENST00000344622 ADGBQ8N7X0 1667 aa11.16□□□□□ -0.62
GDNF-202ENST00000344622 ARAP3Q8WWN8 1544 aa11.15□□□□□ -0.62
GDNF-202ENST00000344622 ARHGEF5Q12774 1597 aa11.15□□□□□ -0.62
GDNF-202ENST00000344622 GCC2Q8IWJ2 1684 aa11.15□□□□□ -0.62
GDNF-202ENST00000344622 AKNAQ7Z591 1439 aa11.15□□□□□ -0.62
GDNF-202ENST00000344622 ZFYVE16Q7Z3T8 1539 aa11.14□□□□□ -0.63
GDNF-202ENST00000344622 RAB3GAP2Q9H2M9 1393 aa11.14□□□□□ -0.63
GDNF-202ENST00000344622 ADGRL1O94910 1474 aa11.14□□□□□ -0.63
GDNF-202ENST00000344622 NCOA1Q15788 1441 aa11.14□□□□□ -0.63
GDNF-202ENST00000344622 INO80Q9ULG1 1556 aaPredicted RBP11.13□□□□□ -0.63
GDNF-202ENST00000344622 SCAPERQ9BY12 1400 aa11.13□□□□□ -0.63
GDNF-202ENST00000344622 ABCA6Q8N139 1617 aa11.12□□□□□ -0.63
GDNF-202ENST00000344622 KDM5CP41229 1560 aa11.12□□□□□ -0.63
GDNF-202ENST00000344622 HFM1A2PYH4 1435 aa11.11□□□□□ -0.63
GDNF-202ENST00000344622 C9orf84Q5VXU9 1444 aa11.11□□□□□ -0.63
GDNF-202ENST00000344622 CCDC141Q6ZP82 1450 aa11.11□□□□□ -0.63
GDNF-202ENST00000344622 YEATS2Q9ULM3 1422 aa11.1□□□□□ -0.63
GDNF-202ENST00000344622 KIAA1107Q9UPP5 1409 aa11.1□□□□□ -0.63
GDNF-202ENST00000344622 ADGRL2O95490 1459 aa11.09□□□□□ -0.63
GDNF-202ENST00000344622 POGZQ7Z3K3 1410 aa11.09□□□□□ -0.63
GDNF-202ENST00000344622 MAST1Q9Y2H9 1570 aa11.09□□□□□ -0.63
GDNF-202ENST00000344622 EFCAB2Q5VUJ9 269 aa11.08□□□□□ -0.64
GDNF-202ENST00000344622 MROH1Q8NDA8 1641 aa11.07□□□□□ -0.64
GDNF-202ENST00000344622 ATP7AQ04656 1500 aa11.07□□□□□ -0.64
GDNF-202ENST00000344622 SHANK2Q9UPX8 1470 aa11.07□□□□□ -0.64
GDNF-202ENST00000344622 PLXNC1O60486 1568 aa11.07□□□□□ -0.64
GDNF-202ENST00000344622 DHX57Q6P158 1386 aaKnown RBP11.06□□□□□ -0.64
GDNF-202ENST00000344622 SETD5Q9C0A6 1442 aa11.06□□□□□ -0.64
GDNF-202ENST00000344622 FOXD1Q16676 465 aa11.06□□□□□ -0.64
GDNF-202ENST00000344622 PLEKHH2Q8IVE3 1493 aa11.06□□□□□ -0.64
GDNF-202ENST00000344622 DIP2CQ9Y2E4 1556 aa11.05□□□□□ -0.64
GDNF-202ENST00000344622 NEO1Q92859 1461 aa11.05□□□□□ -0.64
GDNF-202ENST00000344622 TRHP20396 242 aaPredicted RBP11.05□□□□□ -0.64
GDNF-202ENST00000344622 HECW2Q9P2P5 1572 aa11.04□□□□□ -0.64
GDNF-202ENST00000344622 CFAP74Q9C0B2 1584 aa11.04□□□□□ -0.64
GDNF-202ENST00000344622 ROCK1Q13464 1354 aa11.03□□□□□ -0.64
GDNF-202ENST00000344622 KIF15Q9NS87 1388 aa11.03□□□□□ -0.64
GDNF-202ENST00000344622 ZNF518AQ6AHZ1 1483 aa11.03□□□□□ -0.64
GDNF-202ENST00000344622 PZPP20742 1482 aa11.03□□□□□ -0.64
GDNF-202ENST00000344622 CFAP65Q6ZU64 1925 aaKnown RBP11.01□□□□□ -0.65
GDNF-202ENST00000344622 ANKRD50Q9ULJ7 1429 aa11.01□□□□□ -0.65
GDNF-202ENST00000344622 DEPDC5O75140 1603 aa11.01□□□□□ -0.65
GDNF-202ENST00000344622 ZMYM4Q5VZL5 1548 aa11□□□□□ -0.65
GDNF-202ENST00000344622 MLH3Q9UHC1 1453 aa11□□□□□ -0.65
GDNF-202ENST00000344622 HRCP23327 699 aa11□□□□□ -0.65
GDNF-202ENST00000344622 CEP152O94986 1710 aa10.99□□□□□ -0.65
GDNF-202ENST00000344622 SPAG9O60271 1321 aaKnown RBP10.99□□□□□ -0.65
GDNF-202ENST00000344622 UNC13BO14795 1591 aa10.98□□□□□ -0.65
GDNF-202ENST00000344622 RTEL1-TNFRSF6BF6WH68 1400 aa10.97□□□□□ -0.65
GDNF-202ENST00000344622 MAGI2Q86UL8 1455 aa10.97□□□□□ -0.65
GDNF-202ENST00000344622 SIN3AQ96ST3 1273 aa10.97□□□□□ -0.65
GDNF-202ENST00000344622 ANKRD30AQ9BXX3 1397 aa10.96□□□□□ -0.65
GDNF-202ENST00000344622 TSPY4P0CV99 314 aa10.96□□□□□ -0.65
GDNF-202ENST00000344622 TSPY10P0CW01 314 aa10.96□□□□□ -0.65
GDNF-202ENST00000344622 E9PCH4 1651 aa10.96□□□□□ -0.65
GDNF-202ENST00000344622 DUOX2Q9NRD8 1548 aa10.96□□□□□ -0.65
GDNF-202ENST00000344622 TEX14Q8IWB6 1497 aa10.95□□□□□ -0.66
GDNF-202ENST00000344622 VWDEQ8N2E2 1590 aa10.95□□□□□ -0.66
GDNF-202ENST00000344622 BCORL1Q5H9F3 1711 aa10.94□□□□□ -0.66
GDNF-202ENST00000344622 FAM135AQ9P2D6 1515 aa10.94□□□□□ -0.66
GDNF-202ENST00000344622 PLA2R1Q13018 1463 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms