RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 CAMSAP2Q08AD1 1489 aa24.66■■□□□ 1.54
CEACAM1-202ENST00000344391 ZNF644Q9H582 1327 aaPredicted RBP24.66■■□□□ 1.54
CEACAM1-202ENST00000344391 PLCH2O75038 1416 aa24.64■■□□□ 1.54
CEACAM1-202ENST00000344391 ZNF777Q9ULD5 760 aaPredicted RBP24.62■■□□□ 1.53
CEACAM1-202ENST00000344391 ARHGAP5Q13017 1502 aa24.61■■□□□ 1.53
CEACAM1-202ENST00000344391 ARAP3Q8WWN8 1544 aa24.61■■□□□ 1.53
CEACAM1-202ENST00000344391 PTPRKQ15262 1439 aa24.6■■□□□ 1.53
CEACAM1-202ENST00000344391 DNMT1P26358 1616 aaKnown RBP24.59■■□□□ 1.53
CEACAM1-202ENST00000344391 SAMD9LQ8IVG5 1584 aa24.59■■□□□ 1.53
CEACAM1-202ENST00000344391 DNAJC5Q9H3Z4 198 aa24.57■■□□□ 1.52
CEACAM1-202ENST00000344391 DAPK1P53355 1430 aa24.56■■□□□ 1.52
CEACAM1-202ENST00000344391 ABCC5O15440 1437 aa24.55■■□□□ 1.52
CEACAM1-202ENST00000344391 EFCAB2Q5VUJ9 269 aa24.54■■□□□ 1.52
CEACAM1-202ENST00000344391 GLI2P10070 1586 aa24.53■■□□□ 1.52
CEACAM1-202ENST00000344391 PLEKHH2Q8IVE3 1493 aa24.51■■□□□ 1.51
CEACAM1-202ENST00000344391 ARHGEF5Q12774 1597 aa24.51■■□□□ 1.51
CEACAM1-202ENST00000344391 MBD5Q9P267 1494 aa24.5■■□□□ 1.51
CEACAM1-202ENST00000344391 CD109Q6YHK3 1445 aa24.5■■□□□ 1.51
CEACAM1-202ENST00000344391 CROCC2H7BZ55 1655 aa24.5■■□□□ 1.51
CEACAM1-202ENST00000344391 KIAA1107Q9UPP5 1409 aa24.49■■□□□ 1.51
CEACAM1-202ENST00000344391 DIP2BQ9P265 1576 aa24.49■■□□□ 1.51
CEACAM1-202ENST00000344391 FANCAO15360 1455 aa24.48■■□□□ 1.51
CEACAM1-202ENST00000344391 SYCP2Q9BX26 1530 aa24.48■■□□□ 1.51
CEACAM1-202ENST00000344391 HNRNPMP52272 730 aaKnown RBP eCLIP24.47■■□□□ 1.51
CEACAM1-202ENST00000344391 MAP3K4Q9Y6R4 1608 aa24.47■■□□□ 1.51
CEACAM1-202ENST00000344391 SETD5Q9C0A6 1442 aa24.47■■□□□ 1.51
CEACAM1-202ENST00000344391 ABCC1P33527 1531 aa24.46■■□□□ 1.51
CEACAM1-202ENST00000344391 AKNAQ7Z591 1439 aa24.46■■□□□ 1.51
CEACAM1-202ENST00000344391 CHIC2Q9UKJ5 165 aa24.46■■□□□ 1.51
CEACAM1-202ENST00000344391 RSPH4AQ5TD94 716 aa24.45■■□□□ 1.5
CEACAM1-202ENST00000344391 HFM1A2PYH4 1435 aa24.44■■□□□ 1.5
CEACAM1-202ENST00000344391 ARHGEF12Q9NZN5 1544 aa24.44■■□□□ 1.5
CEACAM1-202ENST00000344391 CCDC141Q6ZP82 1450 aa24.44■■□□□ 1.5
CEACAM1-202ENST00000344391 SHANK2Q9UPX8 1470 aa24.44■■□□□ 1.5
CEACAM1-202ENST00000344391 ROCK1Q13464 1354 aa24.43■■□□□ 1.5
CEACAM1-202ENST00000344391 ADGBQ8N7X0 1667 aa24.42■■□□□ 1.5
CEACAM1-202ENST00000344391 FAM69CQ0P6D2 419 aa24.42■■□□□ 1.5
CEACAM1-202ENST00000344391 CFAP74Q9C0B2 1584 aa24.42■■□□□ 1.5
CEACAM1-202ENST00000344391 NAIPQ13075 1403 aa24.41■■□□□ 1.5
CEACAM1-202ENST00000344391 RAB3GAP2Q9H2M9 1393 aa24.41■■□□□ 1.5
CEACAM1-202ENST00000344391 GCC2Q8IWJ2 1684 aa24.4■■□□□ 1.5
CEACAM1-202ENST00000344391 ADGRL2O95490 1459 aa24.4■■□□□ 1.5
CEACAM1-202ENST00000344391 KIF13AQ9H1H9 1805 aa24.39■■□□□ 1.49
CEACAM1-202ENST00000344391 TSPY4P0CV99 314 aa24.39■■□□□ 1.49
CEACAM1-202ENST00000344391 TSPY10P0CW01 314 aa24.39■■□□□ 1.49
CEACAM1-202ENST00000344391 C9orf84Q5VXU9 1444 aa24.38■■□□□ 1.49
CEACAM1-202ENST00000344391 RRP7BPQ9NSQ0 103 aa24.38■■□□□ 1.49
CEACAM1-202ENST00000344391 HRCP23327 699 aa24.37■■□□□ 1.49
CEACAM1-202ENST00000344391 ADGRL1O94910 1474 aa24.37■■□□□ 1.49
CEACAM1-202ENST00000344391 NCOA1Q15788 1441 aa24.36■■□□□ 1.49
CEACAM1-202ENST00000344391 MAST1Q9Y2H9 1570 aa24.36■■□□□ 1.49
CEACAM1-202ENST00000344391 NEO1Q92859 1461 aa24.35■■□□□ 1.49
CEACAM1-202ENST00000344391 TRAPPC8Q9Y2L5 1435 aa24.35■■□□□ 1.49
CEACAM1-202ENST00000344391 ANKRD30AQ9BXX3 1397 aa24.34■■□□□ 1.49
CEACAM1-202ENST00000344391 SCAPERQ9BY12 1400 aa24.33■■□□□ 1.49
CEACAM1-202ENST00000344391 PPRC1Q5VV67 1664 aaKnown RBP24.31■■□□□ 1.48
CEACAM1-202ENST00000344391 TSPOAP1O95153 1857 aa24.3■■□□□ 1.48
CEACAM1-202ENST00000344391 CCER1Q8TC90 406 aaPredicted RBP24.28■■□□□ 1.48
CEACAM1-202ENST00000344391 KDM6BO15054 1643 aa24.28■■□□□ 1.48
CEACAM1-202ENST00000344391 AFAP1Q8N556 730 aa24.28■■□□□ 1.48
CEACAM1-202ENST00000344391 PLXNC1O60486 1568 aa24.25■■□□□ 1.47
CEACAM1-202ENST00000344391 RTEL1-TNFRSF6BF6WH68 1400 aa24.24■■□□□ 1.47
CEACAM1-202ENST00000344391 TEX14Q8IWB6 1497 aa24.24■■□□□ 1.47
CEACAM1-202ENST00000344391 DHX57Q6P158 1386 aaKnown RBP24.23■■□□□ 1.47
CEACAM1-202ENST00000344391 ZNF518AQ6AHZ1 1483 aa24.23■■□□□ 1.47
CEACAM1-202ENST00000344391 SPAG9O60271 1321 aaKnown RBP24.23■■□□□ 1.47
CEACAM1-202ENST00000344391 KIF15Q9NS87 1388 aa24.23■■□□□ 1.47
CEACAM1-202ENST00000344391 POGZQ7Z3K3 1410 aa24.22■■□□□ 1.47
CEACAM1-202ENST00000344391 ZFYVE16Q7Z3T8 1539 aa24.22■■□□□ 1.47
CEACAM1-202ENST00000344391 INO80Q9ULG1 1556 aaPredicted RBP24.21■■□□□ 1.47
CEACAM1-202ENST00000344391 DENND4BO75064 1496 aaPredicted RBP24.2■■□□□ 1.46
CEACAM1-202ENST00000344391 ANKRD50Q9ULJ7 1429 aa24.2■■□□□ 1.46
CEACAM1-202ENST00000344391 KDM5CP41229 1560 aa24.19■■□□□ 1.46
CEACAM1-202ENST00000344391 ATP7AQ04656 1500 aa24.19■■□□□ 1.46
CEACAM1-202ENST00000344391 ACIN1Q9UKV3 1341 aaKnown RBP24.18■■□□□ 1.46
CEACAM1-202ENST00000344391 RICTORQ6R327 1708 aa24.17■■□□□ 1.46
CEACAM1-202ENST00000344391 KIDINS220Q9ULH0 1771 aa24.15■■□□□ 1.46
CEACAM1-202ENST00000344391 DUOX2Q9NRD8 1548 aa24.15■■□□□ 1.46
CEACAM1-202ENST00000344391 MLH3Q9UHC1 1453 aa24.13■■□□□ 1.45
CEACAM1-202ENST00000344391 RAPGEF3O95398 923 aa24.13■■□□□ 1.45
CEACAM1-202ENST00000344391 HECW2Q9P2P5 1572 aa24.11■■□□□ 1.45
CEACAM1-202ENST00000344391 CLSPNQ9HAW4 1339 aa24.1■■□□□ 1.45
CEACAM1-202ENST00000344391 FRMPD1Q5SYB0 1578 aa24.1■■□□□ 1.45
CEACAM1-202ENST00000344391 TRIM52Q96A61 297 aa24.1■■□□□ 1.45
CEACAM1-202ENST00000344391 ERBINQ96RT1 1412 aa24.09■■□□□ 1.45
CEACAM1-202ENST00000344391 MYT1LQ9UL68 1186 aa24.08■■□□□ 1.45
CEACAM1-202ENST00000344391 ZEB1P37275 1124 aaPredicted RBP24.07■■□□□ 1.44
CEACAM1-202ENST00000344391 TRHP20396 242 aaPredicted RBP24.06■■□□□ 1.44
CEACAM1-202ENST00000344391 ZMYM4Q5VZL5 1548 aa24.04■■□□□ 1.44
CEACAM1-202ENST00000344391 DHX29Q7Z478 1369 aaKnown RBP24.02■■□□□ 1.44
CEACAM1-202ENST00000344391 ABCA6Q8N139 1617 aa24.02■■□□□ 1.44
CEACAM1-202ENST00000344391 COL17A1Q9UMD9 1497 aaPredicted RBP24.02■■□□□ 1.44
CEACAM1-202ENST00000344391 KDM5DQ9BY66 1539 aa24.02■■□□□ 1.44
CEACAM1-202ENST00000344391 UNC13BO14795 1591 aa24.02■■□□□ 1.44
CEACAM1-202ENST00000344391 MPHOSPH9Q99550 1183 aa24.01■■□□□ 1.43
CEACAM1-202ENST00000344391 PZPP20742 1482 aa24■■□□□ 1.43
CEACAM1-202ENST00000344391 EIF2AK4Q9P2K8 1649 aaKnown RBP23.99■■□□□ 1.43
CEACAM1-202ENST00000344391 A2MP01023 1474 aa23.99■■□□□ 1.43
CEACAM1-202ENST00000344391 DIP2CQ9Y2E4 1556 aa23.98■■□□□ 1.43
CEACAM1-202ENST00000344391 MAGI2Q86UL8 1455 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms