RNA–Protein interactions for RNA: ENST00000343815.10

UBAP2L-202, Transcript of ubiquitin associated protein 2 like, humanhuman

TSL 1 (best) BASIC

Gene UBAP2L, Length 3,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2L-202ENST00000343815 LRRC9Q6ZRR7 1453 aa12.84□□□□□ -0.35
UBAP2L-202ENST00000343815 REREQ9P2R6 1566 aa12.84□□□□□ -0.35
UBAP2L-202ENST00000343815 ABCC1P33527 1531 aa12.84□□□□□ -0.35
UBAP2L-202ENST00000343815 BCORL1Q5H9F3 1711 aa12.84□□□□□ -0.35
UBAP2L-202ENST00000343815 SAMD9LQ8IVG5 1584 aa12.83□□□□□ -0.35
UBAP2L-202ENST00000343815 KDM6BO15054 1643 aa12.82□□□□□ -0.36
UBAP2L-202ENST00000343815 COL17A1Q9UMD9 1497 aaPredicted RBP12.82□□□□□ -0.36
UBAP2L-202ENST00000343815 ZNF316A6NFI3 1004 aaPredicted RBP12.82□□□□□ -0.36
UBAP2L-202ENST00000343815 CROCC2H7BZ55 1655 aa12.82□□□□□ -0.36
UBAP2L-202ENST00000343815 ATP1B4Q9UN42 357 aaPredicted RBP12.81□□□□□ -0.36
UBAP2L-202ENST00000343815 GPATCH8Q9UKJ3 1502 aaKnown RBP12.81□□□□□ -0.36
UBAP2L-202ENST00000343815 CD109Q6YHK3 1445 aa12.8□□□□□ -0.36
UBAP2L-202ENST00000343815 ARHGEF5Q12774 1597 aa12.8□□□□□ -0.36
UBAP2L-202ENST00000343815 MAST1Q9Y2H9 1570 aa12.8□□□□□ -0.36
UBAP2L-202ENST00000343815 INO80Q9ULG1 1556 aaPredicted RBP12.79□□□□□ -0.36
UBAP2L-202ENST00000343815 SIGLEC1Q9BZZ2 1709 aa12.79□□□□□ -0.36
UBAP2L-202ENST00000343815 TCOF1Q13428 1488 aaKnown RBP12.78□□□□□ -0.36
UBAP2L-202ENST00000343815 NPM1P06748 294 aaKnown RBP eCLIP12.78□□□□□ -0.36
UBAP2L-202ENST00000343815 SCAF1Q9H7N4 1312 aaKnown RBP12.77□□□□□ -0.37
UBAP2L-202ENST00000343815 ARHGEF40Q8TER5 1519 aa12.76□□□□□ -0.37
UBAP2L-202ENST00000343815 ARHGEF12Q9NZN5 1544 aa12.76□□□□□ -0.37
UBAP2L-202ENST00000343815 KIAA1107Q9UPP5 1409 aa12.75□□□□□ -0.37
UBAP2L-202ENST00000343815 CCNB3Q8WWL7 1395 aa12.75□□□□□ -0.37
UBAP2L-202ENST00000343815 KIDINS220Q9ULH0 1771 aa12.75□□□□□ -0.37
UBAP2L-202ENST00000343815 NCOA2Q15596 1464 aa12.75□□□□□ -0.37
UBAP2L-202ENST00000343815 RRBP1Q9P2E9 1410 aaKnown RBP12.74□□□□□ -0.37
UBAP2L-202ENST00000343815 PLXNC1O60486 1568 aa12.74□□□□□ -0.37
UBAP2L-202ENST00000343815 FANCAO15360 1455 aa12.74□□□□□ -0.37
UBAP2L-202ENST00000343815 MAGI2Q86UL8 1455 aa12.74□□□□□ -0.37
UBAP2L-202ENST00000343815 ADGBQ8N7X0 1667 aa12.73□□□□□ -0.37
UBAP2L-202ENST00000343815 DHX57Q6P158 1386 aaKnown RBP12.73□□□□□ -0.37
UBAP2L-202ENST00000343815 MBD5Q9P267 1494 aa12.73□□□□□ -0.37
UBAP2L-202ENST00000343815 FAM69CQ0P6D2 419 aa12.73□□□□□ -0.37
UBAP2L-202ENST00000343815 POGZQ7Z3K3 1410 aa12.73□□□□□ -0.37
UBAP2L-202ENST00000343815 AKNAQ7Z591 1439 aa12.72□□□□□ -0.37
UBAP2L-202ENST00000343815 HECW2Q9P2P5 1572 aa12.71□□□□□ -0.37
UBAP2L-202ENST00000343815 MIA2Q96PC5 1412 aa12.71□□□□□ -0.37
UBAP2L-202ENST00000343815 NEUROD1Q13562 356 aa12.71□□□□□ -0.37
UBAP2L-202ENST00000343815 MLH3Q9UHC1 1453 aa12.71□□□□□ -0.38
UBAP2L-202ENST00000343815 ABCA6Q8N139 1617 aa12.7□□□□□ -0.38
UBAP2L-202ENST00000343815 PLEKHD1A6NEE1 506 aa12.7□□□□□ -0.38
UBAP2L-202ENST00000343815 PLEKHH2Q8IVE3 1493 aa12.7□□□□□ -0.38
UBAP2L-202ENST00000343815 DIP2CQ9Y2E4 1556 aa12.7□□□□□ -0.38
UBAP2L-202ENST00000343815 PELP1Q8IZL8 1130 aaKnown RBP12.69□□□□□ -0.38
UBAP2L-202ENST00000343815 DNMT1P26358 1616 aaKnown RBP12.69□□□□□ -0.38
UBAP2L-202ENST00000343815 FAM50AQ14320 339 aaKnown RBP12.69□□□□□ -0.38
UBAP2L-202ENST00000343815 ADAMTSL3P82987 1691 aa12.69□□□□□ -0.38
UBAP2L-202ENST00000343815 ZFYVE16Q7Z3T8 1539 aa12.69□□□□□ -0.38
UBAP2L-202ENST00000343815 ACIN1Q9UKV3 1341 aaKnown RBP12.68□□□□□ -0.38
UBAP2L-202ENST00000343815 YTHDC1Q96MU7 727 aaKnown RBP12.68□□□□□ -0.38
UBAP2L-202ENST00000343815 PTPN23Q9H3S7 1636 aa12.67□□□□□ -0.38
UBAP2L-202ENST00000343815 AGLP35573 1532 aa12.67□□□□□ -0.38
UBAP2L-202ENST00000343815 ARHGAP5Q13017 1502 aa12.67□□□□□ -0.38
UBAP2L-202ENST00000343815 SHANK2Q9UPX8 1470 aa12.67□□□□□ -0.38
UBAP2L-202ENST00000343815 CDK11AQ9UQ88 783 aaPredicted RBP12.66□□□□□ -0.38
UBAP2L-202ENST00000343815 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.66□□□□□ -0.381e-6■■■□□ 19.2
UBAP2L-202ENST00000343815 ZNF518AQ6AHZ1 1483 aa12.66□□□□□ -0.38
UBAP2L-202ENST00000343815 MYOM3Q5VTT5 1437 aa12.65□□□□□ -0.38
UBAP2L-202ENST00000343815 MIER1Q8N108 512 aa12.65□□□□□ -0.38
UBAP2L-202ENST00000343815 SYCP2Q9BX26 1530 aa12.65□□□□□ -0.38
UBAP2L-202ENST00000343815 EIF2AK4Q9P2K8 1649 aaKnown RBP12.65□□□□□ -0.38
UBAP2L-202ENST00000343815 DENND4BO75064 1496 aaPredicted RBP12.65□□□□□ -0.38
UBAP2L-202ENST00000343815 ADGRL1O94910 1474 aa12.65□□□□□ -0.38
UBAP2L-202ENST00000343815 CAMSAP2Q08AD1 1489 aa12.65□□□□□ -0.38
UBAP2L-202ENST00000343815 RTEL1-TNFRSF6BF6WH68 1400 aa12.64□□□□□ -0.39
UBAP2L-202ENST00000343815 CENPBP07199 599 aaPredicted RBP12.64□□□□□ -0.39
UBAP2L-202ENST00000343815 FAM135AQ9P2D6 1515 aa12.64□□□□□ -0.39
UBAP2L-202ENST00000343815 CLSPNQ9HAW4 1339 aa12.63□□□□□ -0.39
UBAP2L-202ENST00000343815 DEPDC5O75140 1603 aa12.63□□□□□ -0.39
UBAP2L-202ENST00000343815 RNF17Q9BXT8 1623 aaKnown RBP12.63□□□□□ -0.39
UBAP2L-202ENST00000343815 RAB3GAP2Q9H2M9 1393 aa12.63□□□□□ -0.39
UBAP2L-202ENST00000343815 MROH2AA6NES4 1674 aa12.62□□□□□ -0.39
UBAP2L-202ENST00000343815 ADGRL2O95490 1459 aa12.61□□□□□ -0.39
UBAP2L-202ENST00000343815 ATP7AQ04656 1500 aa12.6□□□□□ -0.39
UBAP2L-202ENST00000343815 TRAPPC8Q9Y2L5 1435 aa12.6□□□□□ -0.39
UBAP2L-202ENST00000343815 MTUS2Q5JR59 1369 aa12.59□□□□□ -0.39
UBAP2L-202ENST00000343815 FGD6Q6ZV73 1430 aa12.58□□□□□ -0.39
UBAP2L-202ENST00000343815 MROH1Q8NDA8 1641 aa12.58□□□□□ -0.4
UBAP2L-202ENST00000343815 SCAPERQ9BY12 1400 aa12.57□□□□□ -0.4
UBAP2L-202ENST00000343815 GTF3C3Q9Y5Q9 886 aa12.57□□□□□ -0.4
UBAP2L-202ENST00000343815 CCDC141Q6ZP82 1450 aa12.57□□□□□ -0.4
UBAP2L-202ENST00000343815 SETD5Q9C0A6 1442 aa12.56□□□□□ -0.4
UBAP2L-202ENST00000343815 TRHP20396 242 aaPredicted RBP12.56□□□□□ -0.4
UBAP2L-202ENST00000343815 VWDEQ8N2E2 1590 aa12.56□□□□□ -0.4
UBAP2L-202ENST00000343815 ATP10AO60312 1499 aa12.55□□□□□ -0.4
UBAP2L-202ENST00000343815 ZC3H13Q5T200 1668 aaKnown RBP12.55□□□□□ -0.4
UBAP2L-202ENST00000343815 KDM5DQ9BY66 1539 aa12.55□□□□□ -0.4
UBAP2L-202ENST00000343815 GCC2Q8IWJ2 1684 aa12.54□□□□□ -0.4
UBAP2L-202ENST00000343815 EFCAB2Q5VUJ9 269 aa12.54□□□□□ -0.4
UBAP2L-202ENST00000343815 C9orf84Q5VXU9 1444 aa12.54□□□□□ -0.4
UBAP2L-202ENST00000343815 KCNH8Q96L42 1107 aa12.53□□□□□ -0.4
UBAP2L-202ENST00000343815 YEATS2Q9ULM3 1422 aa12.53□□□□□ -0.4
UBAP2L-202ENST00000343815 SIN3AQ96ST3 1273 aa12.53□□□□□ -0.4
UBAP2L-202ENST00000343815 ABCC5O15440 1437 aa12.52□□□□□ -0.41
UBAP2L-202ENST00000343815 UNC13BO14795 1591 aa12.52□□□□□ -0.41
UBAP2L-202ENST00000343815 ARID3CA6NKF2 412 aa12.51□□□□□ -0.41
UBAP2L-202ENST00000343815 FER1L4A9Z1Z3 1794 aa12.51□□□□□ -0.41
UBAP2L-202ENST00000343815 DAPK1P53355 1430 aa12.5□□□□□ -0.41
UBAP2L-202ENST00000343815 PRDM15P57071 1507 aaPredicted RBP12.5□□□□□ -0.41
UBAP2L-202ENST00000343815 RSPH4AQ5TD94 716 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms