RNA–Protein interactions for RNA: ENST00000343258.8

VAV3-201, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene VAV3, Length 2,552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-201ENST00000343258 CFAP43Q8NDM7 1665 aa7.24□□□□□ -1.25
VAV3-201ENST00000343258 KIF14Q15058 1648 aa7.24□□□□□ -1.25
VAV3-201ENST00000343258 TROQ12816 1431 aaPredicted RBP7.23□□□□□ -1.25
VAV3-201ENST00000343258 SLC4A1APQ9BWU0 796 aaKnown RBP7.23□□□□□ -1.25
VAV3-201ENST00000343258 FYCO1Q9BQS8 1478 aa7.23□□□□□ -1.25
VAV3-201ENST00000343258 CDK11AQ9UQ88 783 aaPredicted RBP7.22□□□□□ -1.25
VAV3-201ENST00000343258 DMRT2Q9Y5R5 561 aa7.22□□□□□ -1.25
VAV3-201ENST00000343258 FANCAO15360 1455 aa7.21□□□□□ -1.25
VAV3-201ENST00000343258 KDM4FA0A1W2PPD8 638 aa7.21□□□□□ -1.26
VAV3-201ENST00000343258 PLCH2O75038 1416 aa7.2□□□□□ -1.26
VAV3-201ENST00000343258 CCDC18Q5T9S5 1454 aa7.2□□□□□ -1.26
VAV3-201ENST00000343258 AKNAQ7Z591 1439 aa7.2□□□□□ -1.26
VAV3-201ENST00000343258 ARAP3Q8WWN8 1544 aa7.2□□□□□ -1.26
VAV3-201ENST00000343258 NEO1Q92859 1461 aa7.19□□□□□ -1.26
VAV3-201ENST00000343258 KANK4Q5T7N3 995 aaPredicted RBP7.19□□□□□ -1.26
VAV3-201ENST00000343258 VPS8Q8N3P4 1428 aa7.19□□□□□ -1.26
VAV3-201ENST00000343258 FRMPD1Q5SYB0 1578 aa7.18□□□□□ -1.26
VAV3-201ENST00000343258 MTUS2Q5JR59 1369 aa7.18□□□□□ -1.26
VAV3-201ENST00000343258 BCL11AQ9H165 835 aa7.18□□□□□ -1.26
VAV3-201ENST00000343258 SCAPERQ9BY12 1400 aa7.18□□□□□ -1.26
VAV3-201ENST00000343258 EFCAB2Q5VUJ9 269 aa7.17□□□□□ -1.26
VAV3-201ENST00000343258 AFAP1Q8N556 730 aa7.17□□□□□ -1.26
VAV3-201ENST00000343258 ZNF777Q9ULD5 760 aaPredicted RBP7.17□□□□□ -1.26
VAV3-201ENST00000343258 ADGRL1O94910 1474 aa7.17□□□□□ -1.26
VAV3-201ENST00000343258 ZNF644Q9H582 1327 aaPredicted RBP7.17□□□□□ -1.26
VAV3-201ENST00000343258 ARHGAP5Q13017 1502 aa7.17□□□□□ -1.26
VAV3-201ENST00000343258 DENND4BO75064 1496 aaPredicted RBP7.16□□□□□ -1.26
VAV3-201ENST00000343258 YEATS2Q9ULM3 1422 aa7.16□□□□□ -1.26
VAV3-201ENST00000343258 ARHGEF12Q9NZN5 1544 aa7.16□□□□□ -1.26
VAV3-201ENST00000343258 GPATCH8Q9UKJ3 1502 aaKnown RBP7.16□□□□□ -1.26
VAV3-201ENST00000343258 PHLDB1Q86UU1 1377 aa7.16□□□□□ -1.26
VAV3-201ENST00000343258 RNF216Q9NWF9 866 aaPredicted RBP7.15□□□□□ -1.26
VAV3-201ENST00000343258 MYO5CQ9NQX4 1742 aa7.15□□□□□ -1.27
VAV3-201ENST00000343258 CDC42BPBQ9Y5S2 1711 aa7.15□□□□□ -1.27
VAV3-201ENST00000343258 POGZQ7Z3K3 1410 aa7.15□□□□□ -1.27
VAV3-201ENST00000343258 TRAPPC8Q9Y2L5 1435 aa7.15□□□□□ -1.27
VAV3-201ENST00000343258 HNRNPMP52272 730 aaKnown RBP eCLIP7.14□□□□□ -1.27
VAV3-201ENST00000343258 CFDP1Q9UEE9 299 aaPredicted RBP7.14□□□□□ -1.27
VAV3-201ENST00000343258 CCNB3Q8WWL7 1395 aa7.14□□□□□ -1.27
VAV3-201ENST00000343258 TIAM1Q13009 1591 aa7.14□□□□□ -1.27
VAV3-201ENST00000343258 RICTORQ6R327 1708 aa7.14□□□□□ -1.27
VAV3-201ENST00000343258 CDC42BPAQ5VT25 1732 aa7.13□□□□□ -1.27
VAV3-201ENST00000343258 PREX2Q70Z35 1606 aa7.13□□□□□ -1.27
VAV3-201ENST00000343258 NCOA2Q15596 1464 aa7.13□□□□□ -1.27
VAV3-201ENST00000343258 LRRC9Q6ZRR7 1453 aa7.13□□□□□ -1.27
VAV3-201ENST00000343258 ARID4BQ4LE39 1312 aaPredicted RBP7.12□□□□□ -1.27
VAV3-201ENST00000343258 EHBP1L1Q8N3D4 1523 aa7.12□□□□□ -1.27
VAV3-201ENST00000343258 SAMD9LQ8IVG5 1584 aa7.12□□□□□ -1.27
VAV3-201ENST00000343258 SIGLEC1Q9BZZ2 1709 aa7.12□□□□□ -1.27
VAV3-201ENST00000343258 ZBTB22O15209 634 aa7.12□□□□□ -1.27
VAV3-201ENST00000343258 CFAP74Q9C0B2 1584 aa7.11□□□□□ -1.27
VAV3-201ENST00000343258 ABCC1P33527 1531 aa7.11□□□□□ -1.27
VAV3-201ENST00000343258 MLECQ14165 292 aa7.11□□□□□ -1.27
VAV3-201ENST00000343258 MYT1LQ9UL68 1186 aa7.11□□□□□ -1.27
VAV3-201ENST00000343258 SYCP2Q9BX26 1530 aa7.11□□□□□ -1.27
VAV3-201ENST00000343258 HOXD11P31277 338 aaPredicted RBP7.11□□□□□ -1.27
VAV3-201ENST00000343258 ZMYM4Q5VZL5 1548 aa7.1□□□□□ -1.27
VAV3-201ENST00000343258 ARHGEF40Q8TER5 1519 aa7.1□□□□□ -1.27
VAV3-201ENST00000343258 ZNF518AQ6AHZ1 1483 aa7.1□□□□□ -1.27
VAV3-201ENST00000343258 ZFYVE16Q7Z3T8 1539 aa7.1□□□□□ -1.27
VAV3-201ENST00000343258 ERICH6Q7L0X2 663 aa7.1□□□□□ -1.27
VAV3-201ENST00000343258 PCGF6Q9BYE7 350 aa7.09□□□□□ -1.27
VAV3-201ENST00000343258 KDM5CP41229 1560 aa7.09□□□□□ -1.27
VAV3-201ENST00000343258 MBD5Q9P267 1494 aa7.08□□□□□ -1.28
VAV3-201ENST00000343258 APLP2Q06481 763 aa7.08□□□□□ -1.28
VAV3-201ENST00000343258 SPAG9O60271 1321 aaKnown RBP7.08□□□□□ -1.28
VAV3-201ENST00000343258 MAGI2Q86UL8 1455 aa7.07□□□□□ -1.28
VAV3-201ENST00000343258 MAP3K1Q13233 1512 aa7.07□□□□□ -1.28
VAV3-201ENST00000343258 ITSN2Q9NZM3 1697 aa7.07□□□□□ -1.28
VAV3-201ENST00000343258 ATP10AO60312 1499 aa7.07□□□□□ -1.28
VAV3-201ENST00000343258 SUPT6HQ7KZ85 1726 aaKnown RBP7.07□□□□□ -1.28
VAV3-201ENST00000343258 ABCA6Q8N139 1617 aa7.07□□□□□ -1.28
VAV3-201ENST00000343258 DIP2CQ9Y2E4 1556 aa7.07□□□□□ -1.28
VAV3-201ENST00000343258 CAMSAP2Q08AD1 1489 aa7.07□□□□□ -1.28
VAV3-201ENST00000343258 MLH3Q9UHC1 1453 aa7.07□□□□□ -1.28
VAV3-201ENST00000343258 KIAA1107Q9UPP5 1409 aa7.07□□□□□ -1.28
VAV3-201ENST00000343258 HECW2Q9P2P5 1572 aa7.06□□□□□ -1.28
VAV3-201ENST00000343258 C9orf84Q5VXU9 1444 aa7.06□□□□□ -1.28
VAV3-201ENST00000343258 KIDINS220Q9ULH0 1771 aa7.06□□□□□ -1.28
VAV3-201ENST00000343258 MYOM3Q5VTT5 1437 aa7.05□□□□□ -1.28
VAV3-201ENST00000343258 MADDQ8WXG6 1647 aa7.05□□□□□ -1.28
VAV3-201ENST00000343258 CEBPAP49715 358 aaPredicted RBP7.05□□□□□ -1.28
VAV3-201ENST00000343258 BCORL1Q5H9F3 1711 aa7.05□□□□□ -1.28
VAV3-201ENST00000343258 ADAMTSL3P82987 1691 aa7.05□□□□□ -1.28
VAV3-201ENST00000343258 PTPRMP28827 1452 aa7.05□□□□□ -1.28
VAV3-201ENST00000343258 PLEKHH2Q8IVE3 1493 aa7.04□□□□□ -1.28
VAV3-201ENST00000343258 ATP7AQ04656 1500 aa7.03□□□□□ -1.28
VAV3-201ENST00000343258 DCAF8L1A6NGE4 600 aa7.03□□□□□ -1.28
VAV3-201ENST00000343258 INO80Q9ULG1 1556 aaPredicted RBP7.03□□□□□ -1.28
VAV3-201ENST00000343258 CCDC141Q6ZP82 1450 aa7.02□□□□□ -1.29
VAV3-201ENST00000343258 FGD6Q6ZV73 1430 aa7.02□□□□□ -1.29
VAV3-201ENST00000343258 GGT6Q6P531 493 aa7.02□□□□□ -1.29
VAV3-201ENST00000343258 RIMS1Q86UR5 1692 aaKnown RBP7.01□□□□□ -1.29
VAV3-201ENST00000343258 MIA2Q96PC5 1412 aa7.01□□□□□ -1.29
VAV3-201ENST00000343258 CHIC2Q9UKJ5 165 aa7.01□□□□□ -1.29
VAV3-201ENST00000343258 A2MP01023 1474 aa7.01□□□□□ -1.29
VAV3-201ENST00000343258 CENPBP07199 599 aaPredicted RBP7.01□□□□□ -1.29
VAV3-201ENST00000343258 ABCC5O15440 1437 aa7□□□□□ -1.29
VAV3-201ENST00000343258 TSPY4P0CV99 314 aa7□□□□□ -1.29
VAV3-201ENST00000343258 TSPY10P0CW01 314 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms