RNA–Protein interactions for RNA: ENST00000342895.7

LRRC39-201, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRC39, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-201ENST00000342895 MICALL2Q8IY33 904 aa8.15□□□□□ -1.11
LRRC39-201ENST00000342895 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.14□□□□□ -1.11
LRRC39-201ENST00000342895 C3orf67Q6ZVT6 689 aa8.13□□□□□ -1.11
LRRC39-201ENST00000342895 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.13□□□□□ -1.11
LRRC39-201ENST00000342895 PPP1R37O75864 691 aa8.11□□□□□ -1.11
LRRC39-201ENST00000342895 SPRYD3Q8NCJ5 442 aa8.08□□□□□ -1.12
LRRC39-201ENST00000342895 SLAIN1Q8ND83 568 aa8.08□□□□□ -1.12
LRRC39-201ENST00000342895 TMEM92Q6UXU6 159 aa8.03□□□□□ -1.12
LRRC39-201ENST00000342895 PAXIP1Q6ZW49 1069 aaPredicted RBP8.02□□□□□ -1.12
LRRC39-201ENST00000342895 KIF3CO14782 793 aa8.02□□□□□ -1.13
LRRC39-201ENST00000342895 SNPHO15079 494 aa8.01□□□□□ -1.13
LRRC39-201ENST00000342895 CFAP44Q96MT7 982 aa8□□□□□ -1.13
LRRC39-201ENST00000342895 TMC2Q8TDI7 906 aa7.98□□□□□ -1.13
LRRC39-201ENST00000342895 C2orf72A6NCS6 295 aa7.98□□□□□ -1.13
LRRC39-201ENST00000342895 CRISPLD2Q9H0B8 497 aa7.98□□□□□ -1.13
LRRC39-201ENST00000342895 GPHNQ9NQX3 736 aaPredicted RBP7.98□□□□□ -1.13
LRRC39-201ENST00000342895 PDE4AP27815 886 aa7.96□□□□□ -1.14
LRRC39-201ENST00000342895 FOXK1P85037 733 aa7.96□□□□□ -1.14
LRRC39-201ENST00000342895 PLCB2Q00722 1185 aa7.94□□□□□ -1.14
LRRC39-201ENST00000342895 NCKAP5LQ9HCH0 1330 aa7.94□□□□□ -1.14
LRRC39-201ENST00000342895 HOXB3P14651 431 aaPredicted RBP7.94□□□□□ -1.14
LRRC39-201ENST00000342895 DOK7Q18PE1 504 aa7.94□□□□□ -1.14
LRRC39-201ENST00000342895 CADPS2Q86UW7 1296 aa7.93□□□□□ -1.14
LRRC39-201ENST00000342895 MFSD10Q14728 455 aa7.92□□□□□ -1.14
LRRC39-201ENST00000342895 SLC34A2O95436 690 aa7.91□□□□□ -1.14
LRRC39-201ENST00000342895 ZSWIM6Q9HCJ5 1215 aa7.91□□□□□ -1.14
LRRC39-201ENST00000342895 DSG2Q14126 1118 aa7.9□□□□□ -1.14
LRRC39-201ENST00000342895 RIMBP2O15034 1052 aa7.89□□□□□ -1.15
LRRC39-201ENST00000342895 ST18O60284 1047 aa7.89□□□□□ -1.15
LRRC39-201ENST00000342895 PLPP6Q8IY26 295 aa7.89□□□□□ -1.15
LRRC39-201ENST00000342895 LARP6Q9BRS8 491 aaKnown RBP7.89□□□□□ -1.15
LRRC39-201ENST00000342895 PPP1R15BQ5SWA1 713 aa7.88□□□□□ -1.15
LRRC39-201ENST00000342895 DDX27Q96GQ7 796 aaKnown RBP7.88□□□□□ -1.15
LRRC39-201ENST00000342895 ZNF710Q8N1W2 664 aa7.87□□□□□ -1.15
LRRC39-201ENST00000342895 TSHZ2Q9NRE2 1034 aa7.86□□□□□ -1.15
LRRC39-201ENST00000342895 HOXB1P14653 301 aaPredicted RBP7.85□□□□□ -1.15
LRRC39-201ENST00000342895 PTCD2Q8WV60 388 aaKnown RBP7.85□□□□□ -1.15
LRRC39-201ENST00000342895 GPR153Q6NV75 609 aa7.84□□□□□ -1.15
LRRC39-201ENST00000342895 CAMK2BQ13554 666 aa7.83□□□□□ -1.16
LRRC39-201ENST00000342895 PCDHGA4Q9Y5G9 962 aa7.81□□□□□ -1.16
LRRC39-201ENST00000342895 TBC1D12O60347 775 aa7.81□□□□□ -1.16
LRRC39-201ENST00000342895 OXER1Q8TDS5 423 aa7.81□□□□□ -1.16
LRRC39-201ENST00000342895 WDR70Q9NW82 654 aa7.8□□□□□ -1.16
LRRC39-201ENST00000342895 ARSIQ5FYB1 569 aa7.79□□□□□ -1.16
LRRC39-201ENST00000342895 KDM4FA0A1W2PPD8 638 aa7.78□□□□□ -1.16
LRRC39-201ENST00000342895 HAP1P54257 671 aaPredicted RBP7.78□□□□□ -1.16
LRRC39-201ENST00000342895 EMP3P54852 163 aa7.77□□□□□ -1.17
LRRC39-201ENST00000342895 EMILIN3Q9NT22 766 aa7.77□□□□□ -1.17
LRRC39-201ENST00000342895 E2F4Q16254 413 aa7.76□□□□□ -1.17
LRRC39-201ENST00000342895 ARIH1Q9Y4X5 557 aaPredicted RBP7.76□□□□□ -1.17
LRRC39-201ENST00000342895 MARVELD3Q96A59 401 aa7.75□□□□□ -1.17
LRRC39-201ENST00000342895 NUDT7P0C024 238 aa7.74□□□□□ -1.17
LRRC39-201ENST00000342895 UPF1Q92900 1129 aaKnown RBP eCLIP7.74□□□□□ -1.17
LRRC39-201ENST00000342895 KHSRPQ92945 711 aaKnown RBP eCLIP7.74□□□□□ -1.17
LRRC39-201ENST00000342895 VSIG10Q8N0Z9 540 aa7.73□□□□□ -1.17
LRRC39-201ENST00000342895 ZNF316A6NFI3 1004 aaPredicted RBP7.72□□□□□ -1.17
LRRC39-201ENST00000342895 MAP3K9P80192 1104 aa7.72□□□□□ -1.17
LRRC39-201ENST00000342895 RNF166Q96A37 237 aaPredicted RBP7.72□□□□□ -1.17
LRRC39-201ENST00000342895 ANO8Q9HCE9 1232 aaPredicted RBP7.72□□□□□ -1.17
LRRC39-201ENST00000342895 ERBB3P21860 1342 aa7.72□□□□□ -1.17
LRRC39-201ENST00000342895 PSDA5PKW4 1024 aaPredicted RBP7.71□□□□□ -1.18
LRRC39-201ENST00000342895 HS3ST6Q96QI5 342 aa7.71□□□□□ -1.18
LRRC39-201ENST00000342895 FAM205CA6NFA0 338 aa7.7□□□□□ -1.18
LRRC39-201ENST00000342895 EVI5O60447 810 aa7.7□□□□□ -1.18
LRRC39-201ENST00000342895 LHX6Q9UPM6 363 aa7.7□□□□□ -1.18
LRRC39-201ENST00000342895 P3H3Q8IVL6 736 aa7.69□□□□□ -1.18
LRRC39-201ENST00000342895 POTEB3A0JP26 581 aa7.68□□□□□ -1.18
LRRC39-201ENST00000342895 SPDYE16A6NNV3 312 aaPredicted RBP7.68□□□□□ -1.18
LRRC39-201ENST00000342895 DPYSL4O14531 572 aa7.68□□□□□ -1.18
LRRC39-201ENST00000342895 POTEBQ6S5H4 581 aa7.68□□□□□ -1.18
LRRC39-201ENST00000342895 ARHGEF1Q92888 912 aaKnown RBP7.68□□□□□ -1.18
LRRC39-201ENST00000342895 PDIA6Q15084 440 aa7.68□□□□□ -1.18
LRRC39-201ENST00000342895 VARS2Q5ST30 1063 aaKnown RBP7.68□□□□□ -1.18
LRRC39-201ENST00000342895 KDM2AQ9Y2K7 1162 aa7.68□□□□□ -1.18
LRRC39-201ENST00000342895 ZNF687Q8N1G0 1237 aa7.67□□□□□ -1.18
LRRC39-201ENST00000342895 PTGER2P43116 358 aa7.66□□□□□ -1.18
LRRC39-201ENST00000342895 KCNV2Q8TDN2 545 aa7.66□□□□□ -1.18
LRRC39-201ENST00000342895 JPH4Q96JJ6 628 aa7.64□□□□□ -1.19
LRRC39-201ENST00000342895 FOSBP53539 338 aa7.64□□□□□ -1.19
LRRC39-201ENST00000342895 PPP4R3BQ5MIZ7 849 aa7.64□□□□□ -1.19
LRRC39-201ENST00000342895 KRTAP3-3Q9BYR6 98 aa7.62□□□□□ -1.19
LRRC39-201ENST00000342895 KRTAP3-2Q9BYR7 98 aa7.62□□□□□ -1.19
LRRC39-201ENST00000342895 PHF14O94880 888 aa7.62□□□□□ -1.19
LRRC39-201ENST00000342895 PBX2P40425 430 aa7.62□□□□□ -1.19
LRRC39-201ENST00000342895 ZNF454Q8N9F8 522 aa7.61□□□□□ -1.19
LRRC39-201ENST00000342895 EPAS1Q99814 870 aa7.6□□□□□ -1.19
LRRC39-201ENST00000342895 FBXW7Q969H0 707 aa7.6□□□□□ -1.19
LRRC39-201ENST00000342895 ZDHHC16Q969W1 377 aa7.59□□□□□ -1.19
LRRC39-201ENST00000342895 BCL2L12Q9HB09 334 aa7.59□□□□□ -1.19
LRRC39-201ENST00000342895 PCDHGA10Q9Y5H3 936 aa7.59□□□□□ -1.19
LRRC39-201ENST00000342895 TYW1BQ6NUM6 668 aa7.58□□□□□ -1.2
LRRC39-201ENST00000342895 POTEEQ6S8J3 1075 aa7.57□□□□□ -1.2
LRRC39-201ENST00000342895 ARHGAP33O14559 1287 aa7.56□□□□□ -1.2
LRRC39-201ENST00000342895 IRX2Q9BZI1 471 aaPredicted RBP7.55□□□□□ -1.2
LRRC39-201ENST00000342895 DDX12PQ92771 950 aa7.55□□□□□ -1.2
LRRC39-201ENST00000342895 KCNH8Q96L42 1107 aa7.55□□□□□ -1.2
LRRC39-201ENST00000342895 ADAM33Q9BZ11 813 aa7.54□□□□□ -1.2
LRRC39-201ENST00000342895 PTPREP23469 700 aa7.53□□□□□ -1.2
LRRC39-201ENST00000342895 SLC24A1O60721 1099 aa7.53□□□□□ -1.2
LRRC39-201ENST00000342895 LSM11P83369 360 aaKnown RBP eCLIP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms