RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 ARHGAP5Q13017 1502 aa34.36■■■■□ 3.09
RBM38-201ENST00000342690 NCOA2Q15596 1464 aa34.36■■■■□ 3.09
RBM38-201ENST00000342690 GPATCH8Q9UKJ3 1502 aaKnown RBP34.35■■■■□ 3.09
RBM38-201ENST00000342690 PHLDB1Q86UU1 1377 aa34.34■■■■□ 3.09
RBM38-201ENST00000342690 AKNAQ7Z591 1439 aa34.32■■■■□ 3.08
RBM38-201ENST00000342690 CCNB3Q8WWL7 1395 aa34.32■■■■□ 3.08
RBM38-201ENST00000342690 EFCAB2Q5VUJ9 269 aa34.29■■■■□ 3.08
RBM38-201ENST00000342690 ITSN2Q9NZM3 1697 aa34.28■■■■□ 3.08
RBM38-201ENST00000342690 ADGRL1O94910 1474 aa34.23■■■■□ 3.07
RBM38-201ENST00000342690 FRMPD1Q5SYB0 1578 aa34.19■■■■□ 3.06
RBM38-201ENST00000342690 SAMD9LQ8IVG5 1584 aa34.19■■■■□ 3.06
RBM38-201ENST00000342690 CFDP1Q9UEE9 299 aaPredicted RBP34.18■■■■□ 3.06
RBM38-201ENST00000342690 DENND4BO75064 1496 aaPredicted RBP34.18■■■■□ 3.06
RBM38-201ENST00000342690 ABCC1P33527 1531 aa34.17■■■■□ 3.06
RBM38-201ENST00000342690 SCAPERQ9BY12 1400 aa34.17■■■■□ 3.06
RBM38-201ENST00000342690 RICTORQ6R327 1708 aa34.16■■■■□ 3.06
RBM38-201ENST00000342690 RAPGEF3O95398 923 aa34.13■■■■□ 3.05
RBM38-201ENST00000342690 ZNF777Q9ULD5 760 aaPredicted RBP34.13■■■■□ 3.05
RBM38-201ENST00000342690 MYOM3Q5VTT5 1437 aa34.11■■■■□ 3.05
RBM38-201ENST00000342690 POGZQ7Z3K3 1410 aa34.11■■■■□ 3.05
RBM38-201ENST00000342690 ARHGEF12Q9NZN5 1544 aa34.1■■■■□ 3.05
RBM38-201ENST00000342690 SYCP2Q9BX26 1530 aa34.07■■■■□ 3.04
RBM38-201ENST00000342690 PLEKHH2Q8IVE3 1493 aa34.06■■■■□ 3.04
RBM38-201ENST00000342690 ZNF644Q9H582 1327 aaPredicted RBP34.04■■■■□ 3.04
RBM38-201ENST00000342690 PPARGC1BQ86YN6 1023 aaKnown RBP34.04■■■■□ 3.04
RBM38-201ENST00000342690 CAMSAP2Q08AD1 1489 aa34.03■■■■□ 3.04
RBM38-201ENST00000342690 ZMYM4Q5VZL5 1548 aa34.03■■■■□ 3.04
RBM38-201ENST00000342690 KIAA1107Q9UPP5 1409 aa34.03■■■■□ 3.04
RBM38-201ENST00000342690 TRAPPC8Q9Y2L5 1435 aa34.03■■■■□ 3.04
RBM38-201ENST00000342690 MIA2Q96PC5 1412 aa34.02■■■■□ 3.04
RBM38-201ENST00000342690 ZNF518AQ6AHZ1 1483 aa34.01■■■■□ 3.04
RBM38-201ENST00000342690 KDM5CP41229 1560 aa34■■■■□ 3.03
RBM38-201ENST00000342690 HNRNPMP52272 730 aaKnown RBP eCLIP33.97■■■■□ 3.03
RBM38-201ENST00000342690 AFAP1Q8N556 730 aa33.96■■■■□ 3.03
RBM38-201ENST00000342690 FGD6Q6ZV73 1430 aa33.95■■■■□ 3.02
RBM38-201ENST00000342690 MBD5Q9P267 1494 aa33.95■■■■□ 3.02
RBM38-201ENST00000342690 PTPN23Q9H3S7 1636 aa33.93■■■■□ 3.02
RBM38-201ENST00000342690 HECW2Q9P2P5 1572 aa33.91■■■■□ 3.02
RBM38-201ENST00000342690 ARHGEF40Q8TER5 1519 aa33.91■■■■□ 3.02
RBM38-201ENST00000342690 MAGI2Q86UL8 1455 aa33.9■■■■□ 3.02
RBM38-201ENST00000342690 ZFYVE16Q7Z3T8 1539 aa33.89■■■■□ 3.02
RBM38-201ENST00000342690 YEATS2Q9ULM3 1422 aa33.88■■■■□ 3.01
RBM38-201ENST00000342690 TCOF1Q13428 1488 aaKnown RBP33.88■■■■□ 3.01
RBM38-201ENST00000342690 ARHGEF5Q12774 1597 aa33.87■■■■□ 3.01
RBM38-201ENST00000342690 MLH3Q9UHC1 1453 aa33.86■■■■□ 3.01
RBM38-201ENST00000342690 CCDC141Q6ZP82 1450 aa33.84■■■■□ 3.01
RBM38-201ENST00000342690 KIDINS220Q9ULH0 1771 aa33.83■■■■□ 3.01
RBM38-201ENST00000342690 INO80Q9ULG1 1556 aaPredicted RBP33.81■■■■□ 3
RBM38-201ENST00000342690 ABCA6Q8N139 1617 aa33.79■■■■□ 3
RBM38-201ENST00000342690 SPAG9O60271 1321 aaKnown RBP33.79■■■■□ 3
RBM38-201ENST00000342690 DIP2CQ9Y2E4 1556 aa33.78■■■■□ 3
RBM38-201ENST00000342690 MYT1LQ9UL68 1186 aa33.78■■■■□ 3
RBM38-201ENST00000342690 ATP7AQ04656 1500 aa33.78■■■■□ 3
RBM38-201ENST00000342690 RSPH4AQ5TD94 716 aa33.77■■■■□ 3
RBM38-201ENST00000342690 DNMT1P26358 1616 aaKnown RBP33.72■■■□□ 2.99
RBM38-201ENST00000342690 ATP10AO60312 1499 aa33.72■■■□□ 2.99
RBM38-201ENST00000342690 CROCC2H7BZ55 1655 aa33.71■■■□□ 2.99
RBM38-201ENST00000342690 SIGLEC1Q9BZZ2 1709 aa33.7■■■□□ 2.99
RBM38-201ENST00000342690 RTEL1-TNFRSF6BF6WH68 1400 aa33.7■■■□□ 2.98
RBM38-201ENST00000342690 C9orf84Q5VXU9 1444 aa33.7■■■□□ 2.98
RBM38-201ENST00000342690 MAST1Q9Y2H9 1570 aa33.69■■■□□ 2.98
RBM38-201ENST00000342690 FAM50AQ14320 339 aaKnown RBP33.69■■■□□ 2.98
RBM38-201ENST00000342690 ABCC5O15440 1437 aa33.69■■■□□ 2.98
RBM38-201ENST00000342690 DAPK1P53355 1430 aa33.68■■■□□ 2.98
RBM38-201ENST00000342690 REREQ9P2R6 1566 aa33.66■■■□□ 2.98
RBM38-201ENST00000342690 TSPY4P0CV99 314 aa33.65■■■□□ 2.98
RBM38-201ENST00000342690 TSPY10P0CW01 314 aa33.65■■■□□ 2.98
RBM38-201ENST00000342690 SHANK2Q9UPX8 1470 aa33.64■■■□□ 2.98
RBM38-201ENST00000342690 RRBP1Q9P2E9 1410 aaKnown RBP33.64■■■□□ 2.98
RBM38-201ENST00000342690 ADGBQ8N7X0 1667 aa33.61■■■□□ 2.97
RBM38-201ENST00000342690 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.59■■■□□ 2.971e-6■■■□□ 15.6
RBM38-201ENST00000342690 A2MP01023 1474 aa33.56■■■□□ 2.96
RBM38-201ENST00000342690 ARID4BQ4LE39 1312 aaPredicted RBP33.56■■■□□ 2.96
RBM38-201ENST00000342690 PLXNC1O60486 1568 aa33.56■■■□□ 2.96
RBM38-201ENST00000342690 BCORL1Q5H9F3 1711 aa33.54■■■□□ 2.96
RBM38-201ENST00000342690 AGLP35573 1532 aa33.53■■■□□ 2.96
RBM38-201ENST00000342690 PTPRKQ15262 1439 aa33.5■■■□□ 2.95
RBM38-201ENST00000342690 KDM4FA0A1W2PPD8 638 aa33.48■■■□□ 2.95
RBM38-201ENST00000342690 CHIC2Q9UKJ5 165 aa33.48■■■□□ 2.95
RBM38-201ENST00000342690 ADAMTSL3P82987 1691 aa33.47■■■□□ 2.95
RBM38-201ENST00000342690 DHX29Q7Z478 1369 aaKnown RBP33.47■■■□□ 2.95
RBM38-201ENST00000342690 ADGRL2O95490 1459 aa33.46■■■□□ 2.95
RBM38-201ENST00000342690 ANKRD30AQ9BXX3 1397 aa33.43■■■□□ 2.94
RBM38-201ENST00000342690 KIF15Q9NS87 1388 aa33.43■■■□□ 2.94
RBM38-201ENST00000342690 MLECQ14165 292 aa33.42■■■□□ 2.94
RBM38-201ENST00000342690 ITGAEP38570 1179 aa33.41■■■□□ 2.94
RBM38-201ENST00000342690 NCOA1Q15788 1441 aa33.41■■■□□ 2.94
RBM38-201ENST00000342690 DUOX2Q9NRD8 1548 aa33.41■■■□□ 2.94
RBM38-201ENST00000342690 RRP7BPQ9NSQ0 103 aa33.4■■■□□ 2.94
RBM38-201ENST00000342690 MADDQ8WXG6 1647 aa33.39■■■□□ 2.94
RBM38-201ENST00000342690 EIF2AK4Q9P2K8 1649 aaKnown RBP33.35■■■□□ 2.93
RBM38-201ENST00000342690 FER1L4A9Z1Z3 1794 aa33.34■■■□□ 2.93
RBM38-201ENST00000342690 ROCK1Q13464 1354 aa33.34■■■□□ 2.93
RBM38-201ENST00000342690 ERBINQ96RT1 1412 aa33.31■■■□□ 2.92
RBM38-201ENST00000342690 RIMS1Q86UR5 1692 aaKnown RBP33.31■■■□□ 2.92
RBM38-201ENST00000342690 KIF3BO15066 747 aa33.3■■■□□ 2.92
RBM38-201ENST00000342690 RNF17Q9BXT8 1623 aaKnown RBP33.27■■■□□ 2.92
RBM38-201ENST00000342690 GGT6Q6P531 493 aa33.25■■■□□ 2.91
RBM38-201ENST00000342690 MROH1Q8NDA8 1641 aa33.21■■■□□ 2.91
RBM38-201ENST00000342690 ANKRD50Q9ULJ7 1429 aa33.21■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms