RNA–Protein interactions for RNA: ENST00000341926.7

CAST-204, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-204ENST00000341926 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.87□□□□□ -0.67
CAST-204ENST00000341926 TPM2P07951 284 aa10.87□□□□□ -0.67
CAST-204ENST00000341926 CLCN1P35523 988 aa10.87□□□□□ -0.67
CAST-204ENST00000341926 WWC1Q8IX03 1113 aa10.87□□□□□ -0.67
CAST-204ENST00000341926 CLGNO14967 610 aa10.86□□□□□ -0.67
CAST-204ENST00000341926 ANP32BQ92688 251 aaKnown RBP10.86□□□□□ -0.67
CAST-204ENST00000341926 PTMAP06454 111 aaKnown RBP10.85□□□□□ -0.67
CAST-204ENST00000341926 TMEM132AQ24JP5 1023 aa10.84□□□□□ -0.67
CAST-204ENST00000341926 MAP7D2Q96T17 732 aa10.84□□□□□ -0.67
CAST-204ENST00000341926 PLCD3Q8N3E9 789 aa10.84□□□□□ -0.67
CAST-204ENST00000341926 IRX3P78415 501 aaPredicted RBP10.83□□□□□ -0.68
CAST-204ENST00000341926 DDRGK1Q96HY6 314 aa10.83□□□□□ -0.68
CAST-204ENST00000341926 FRAT1Q92837 279 aaPredicted RBP10.83□□□□□ -0.68
CAST-204ENST00000341926 PPP4R2Q9NY27 417 aa10.83□□□□□ -0.68
CAST-204ENST00000341926 WDR62O43379 1518 aa10.82□□□□□ -0.68
CAST-204ENST00000341926 CLSTN1O94985 981 aa10.82□□□□□ -0.68
CAST-204ENST00000341926 PDS5BQ9NTI5 1447 aa10.82□□□□□ -0.68
CAST-204ENST00000341926 SMARCA4P51532 1647 aa10.82□□□□□ -0.68
CAST-204ENST00000341926 PRDM10Q9NQV6 1147 aa10.8□□□□□ -0.68
CAST-204ENST00000341926 MCCP23508 829 aa10.8□□□□□ -0.68
CAST-204ENST00000341926 DCAF11Q8TEB1 546 aa10.8□□□□□ -0.68
CAST-204ENST00000341926 FAM193AP78312 1265 aa10.79□□□□□ -0.68
CAST-204ENST00000341926 AXDND1Q5T1B0 1012 aaPredicted RBP10.79□□□□□ -0.68
CAST-204ENST00000341926 ZNF622Q969S3 477 aaKnown RBP eCLIP10.79□□□□□ -0.681e-7■■□□□ 14.1
CAST-204ENST00000341926 MRC2Q9UBG0 1479 aa10.79□□□□□ -0.68
CAST-204ENST00000341926 PPP4R3BQ5MIZ7 849 aa10.78□□□□□ -0.68
CAST-204ENST00000341926 PEG3Q9GZU2 1588 aa10.78□□□□□ -0.68
CAST-204ENST00000341926 DMTNQ08495 405 aa10.78□□□□□ -0.68
CAST-204ENST00000341926 IGSF3O75054 1194 aa10.77□□□□□ -0.69
CAST-204ENST00000341926 TAF3Q5VWG9 929 aa10.77□□□□□ -0.69
CAST-204ENST00000341926 BAZ1BQ9UIG0 1483 aaKnown RBP10.77□□□□□ -0.69
CAST-204ENST00000341926 RIMBP3CA6NJZ7 1639 aa10.77□□□□□ -0.69
CAST-204ENST00000341926 RIMBP3BA6NNM3 1639 aa10.77□□□□□ -0.69
CAST-204ENST00000341926 RIMBP3Q9UFD9 1639 aa10.77□□□□□ -0.69
CAST-204ENST00000341926 KIF20AO95235 890 aa10.76□□□□□ -0.69
CAST-204ENST00000341926 PTMSP20962 102 aa10.76□□□□□ -0.69
CAST-204ENST00000341926 PLCD4Q9BRC7 762 aa10.75□□□□□ -0.69
CAST-204ENST00000341926 HDAC5Q9UQL6 1122 aa10.75□□□□□ -0.69
CAST-204ENST00000341926 VGLL3A8MV65 326 aa10.73□□□□□ -0.69
CAST-204ENST00000341926 PHF14O94880 888 aa10.73□□□□□ -0.69
CAST-204ENST00000341926 PUS7Q96PZ0 661 aaKnown RBP10.73□□□□□ -0.69
CAST-204ENST00000341926 ZHX1Q9UKY1 873 aaPredicted RBP10.73□□□□□ -0.69
CAST-204ENST00000341926 EEA1Q15075 1411 aa10.73□□□□□ -0.69
CAST-204ENST00000341926 TNNT2P45379 298 aaPredicted RBP10.73□□□□□ -0.69
CAST-204ENST00000341926 PSEN1P49768 467 aa10.73□□□□□ -0.69
CAST-204ENST00000341926 SLC20A2Q08357 652 aa10.72□□□□□ -0.69
CAST-204ENST00000341926 OSCARQ8IYS5 282 aa10.72□□□□□ -0.69
CAST-204ENST00000341926 ZNF592Q92610 1267 aa10.72□□□□□ -0.69
CAST-204ENST00000341926 LAS1LQ9Y4W2 734 aaKnown RBP10.72□□□□□ -0.69
CAST-204ENST00000341926 MTERF4Q7Z6M4 381 aaKnown RBP10.71□□□□□ -0.69
CAST-204ENST00000341926 TMED8Q6PL24 325 aaPredicted RBP10.7□□□□□ -0.7
CAST-204ENST00000341926 L1TD1Q5T7N2 865 aaKnown RBP10.7□□□□□ -0.7
CAST-204ENST00000341926 SLC52A1Q9NWF4 448 aa10.69□□□□□ -0.7
CAST-204ENST00000341926 NFKBIBQ15653 356 aa10.69□□□□□ -0.7
CAST-204ENST00000341926 PATL2C9JE40 543 aaKnown RBP10.68□□□□□ -0.7
CAST-204ENST00000341926 TERF1P54274 439 aa10.68□□□□□ -0.7
CAST-204ENST00000341926 FAM43BQ6ZT52 329 aaPredicted RBP10.68□□□□□ -0.7
CAST-204ENST00000341926 GTPBP4Q9BZE4 634 aaKnown RBP10.67□□□□□ -0.7
CAST-204ENST00000341926 LETM1O95202 739 aaPredicted RBP10.67□□□□□ -0.7
CAST-204ENST00000341926 KCNH8Q96L42 1107 aa10.67□□□□□ -0.7
CAST-204ENST00000341926 UBTFP17480 764 aaKnown RBP10.66□□□□□ -0.7
CAST-204ENST00000341926 CCER2I3L3R5 266 aa10.66□□□□□ -0.7
CAST-204ENST00000341926 APPP05067 770 aa10.65□□□□□ -0.7
CAST-204ENST00000341926 SETQ01105 290 aaPredicted RBP10.65□□□□□ -0.7
CAST-204ENST00000341926 TRIM44Q96DX7 344 aaPredicted RBP10.65□□□□□ -0.7
CAST-204ENST00000341926 ARHGEF11O15085 1522 aa10.65□□□□□ -0.71
CAST-204ENST00000341926 GOLGA6L3A6NEY3 463 aa10.64□□□□□ -0.71
CAST-204ENST00000341926 DNTTIP2Q5QJE6 756 aaKnown RBP10.64□□□□□ -0.71
CAST-204ENST00000341926 YY1AP1Q9H869 796 aa10.64□□□□□ -0.71
CAST-204ENST00000341926 CEP120Q8N960 986 aa10.64□□□□□ -0.71
CAST-204ENST00000341926 MYCNP04198 464 aaPredicted RBP10.63□□□□□ -0.71
CAST-204ENST00000341926 CADPSQ9ULU8 1353 aa10.63□□□□□ -0.71
CAST-204ENST00000341926 PSMD1Q99460 953 aa10.63□□□□□ -0.71
CAST-204ENST00000341926 NPM1P06748 294 aaKnown RBP eCLIP10.62□□□□□ -0.71
CAST-204ENST00000341926 ZSCAN20P17040 1043 aaPredicted RBP10.62□□□□□ -0.71
CAST-204ENST00000341926 SLC4A2P04920 1241 aa10.62□□□□□ -0.71
CAST-204ENST00000341926 CEP164Q9UPV0 1460 aa10.61□□□□□ -0.71
CAST-204ENST00000341926 CFAP44Q96MT7 982 aa10.61□□□□□ -0.71
CAST-204ENST00000341926 GEMIN8Q9NWZ8 242 aaKnown RBP10.61□□□□□ -0.71
CAST-204ENST00000341926 CARD10Q9BWT7 1032 aa10.6□□□□□ -0.71
CAST-204ENST00000341926 SOX12O15370 315 aa10.59□□□□□ -0.71
CAST-204ENST00000341926 DNAJC2Q99543 621 aaKnown RBP10.59□□□□□ -0.71
CAST-204ENST00000341926 RALBP1Q15311 655 aa10.59□□□□□ -0.71
CAST-204ENST00000341926 CC2D1BQ5T0F9 858 aaKnown RBP10.59□□□□□ -0.71
CAST-204ENST00000341926 NBPF20Q3BBV1 942 aa10.58□□□□□ -0.72
CAST-204ENST00000341926 WRNQ14191 1432 aaPredicted RBP eCLIP10.57□□□□□ -0.72
CAST-204ENST00000341926 EGFL6Q8IUX8 553 aa10.55□□□□□ -0.72
CAST-204ENST00000341926 B4GALNT3Q6L9W6 998 aa10.55□□□□□ -0.72
CAST-204ENST00000341926 RIPK4P57078 832 aa10.54□□□□□ -0.72
CAST-204ENST00000341926 ESPNB1AK53 854 aa10.53□□□□□ -0.72
CAST-204ENST00000341926 TRIM52Q96A61 297 aa10.53□□□□□ -0.72
CAST-204ENST00000341926 CC2D2BQ6DHV5 1058 aa10.52□□□□□ -0.72
CAST-204ENST00000341926 CCDC94Q9BW85 323 aaPredicted RBP10.52□□□□□ -0.72
CAST-204ENST00000341926 FANCD2Q9BXW9 1451 aa10.52□□□□□ -0.72
CAST-204ENST00000341926 KIAA1211Q6ZU35 1233 aa10.52□□□□□ -0.73
CAST-204ENST00000341926 TCERG1O14776 1098 aaKnown RBP10.51□□□□□ -0.73
CAST-204ENST00000341926 NGEFQ8N5V2 710 aa10.51□□□□□ -0.73
CAST-204ENST00000341926 E9PSI1 815 aa10.51□□□□□ -0.73
CAST-204ENST00000341926 PLCB2Q00722 1185 aa10.51□□□□□ -0.73
CAST-204ENST00000341926 PRDM16Q9HAZ2 1276 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms