RNA–Protein interactions for RNA: ENST00000341255.3

RTL6-201, Transcript of retrotransposon Gag like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTL6, Length 5,495 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6-201ENST00000341255 MSNP26038 577 aaKnown RBP20.69■□□□□ 0.9
RTL6-201ENST00000341255 CCDC88BA6NC98 1476 aa20.68■□□□□ 0.9
RTL6-201ENST00000341255 CARMIL2Q6F5E8 1435 aa20.68■□□□□ 0.9
RTL6-201ENST00000341255 FGD1P98174 961 aa20.68■□□□□ 0.9
RTL6-201ENST00000341255 KTN1Q86UP2 1357 aaKnown RBP20.68■□□□□ 0.9
RTL6-201ENST00000341255 KCNJ4P48050 445 aa20.67■□□□□ 0.9
RTL6-201ENST00000341255 RCAN3Q9UKA8 241 aa20.67■□□□□ 0.9
RTL6-201ENST00000341255 GGT6Q6P531 493 aa20.67■□□□□ 0.9
RTL6-201ENST00000341255 MLECQ14165 292 aa20.67■□□□□ 0.9
RTL6-201ENST00000341255 SAFB2Q14151 953 aaKnown RBP eCLIP20.66■□□□□ 0.9
RTL6-201ENST00000341255 TCERG1O14776 1098 aaKnown RBP20.65■□□□□ 0.9
RTL6-201ENST00000341255 TAOK2Q9UL54 1235 aa20.65■□□□□ 0.9
RTL6-201ENST00000341255 FMN1Q68DA7 1419 aa20.65■□□□□ 0.9
RTL6-201ENST00000341255 FOXD1Q16676 465 aa20.64■□□□□ 0.9
RTL6-201ENST00000341255 GOLGA6L6A8MZA4 724 aa20.64■□□□□ 0.89
RTL6-201ENST00000341255 SOX12O15370 315 aa20.64■□□□□ 0.89
RTL6-201ENST00000341255 MPHOSPH9Q99550 1183 aa20.63■□□□□ 0.89
RTL6-201ENST00000341255 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
RTL6-201ENST00000341255 RAB3GAP2Q9H2M9 1393 aa20.63■□□□□ 0.89
RTL6-201ENST00000341255 NPHP1O15259 732 aa20.62■□□□□ 0.89
RTL6-201ENST00000341255 ABCC8Q09428 1581 aa20.61■□□□□ 0.89
RTL6-201ENST00000341255 HDGFL2Q7Z4V5 671 aaPredicted RBP20.61■□□□□ 0.89
RTL6-201ENST00000341255 NUP155O75694 1391 aa20.61■□□□□ 0.89
RTL6-201ENST00000341255 CHAF1AQ13111 956 aaPredicted RBP20.6■□□□□ 0.89
RTL6-201ENST00000341255 SLKQ9H2G2 1235 aaPredicted RBP20.6■□□□□ 0.89
RTL6-201ENST00000341255 GOLGA6L4A6NEF3 574 aa20.6■□□□□ 0.89
RTL6-201ENST00000341255 IPO9Q96P70 1041 aaKnown RBP20.6■□□□□ 0.89
RTL6-201ENST00000341255 PDS5BQ9NTI5 1447 aa20.59■□□□□ 0.89
RTL6-201ENST00000341255 EFCAB2Q5VUJ9 269 aa20.59■□□□□ 0.89
RTL6-201ENST00000341255 RTF1Q92541 710 aaKnown RBP20.59■□□□□ 0.89
RTL6-201ENST00000341255 RALBP1Q15311 655 aa20.59■□□□□ 0.89
RTL6-201ENST00000341255 CFAP44Q96MT7 982 aa20.59■□□□□ 0.89
RTL6-201ENST00000341255 GZF1Q9H116 711 aaPredicted RBP20.59■□□□□ 0.89
RTL6-201ENST00000341255 STK26Q9P289 416 aa20.59■□□□□ 0.89
RTL6-201ENST00000341255 ROCK2O75116 1388 aaKnown RBP20.59■□□□□ 0.89
RTL6-201ENST00000341255 ANKRD30AQ9BXX3 1397 aa20.59■□□□□ 0.89
RTL6-201ENST00000341255 IPO8O15397 1037 aaKnown RBP20.58■□□□□ 0.88
RTL6-201ENST00000341255 SMARCA2P51531 1590 aa20.58■□□□□ 0.88
RTL6-201ENST00000341255 NAP1L2Q9ULW6 460 aaPredicted RBP20.57■□□□□ 0.88
RTL6-201ENST00000341255 TDRD9Q8NDG6 1382 aaKnown RBP20.57■□□□□ 0.88
RTL6-201ENST00000341255 NRDCO43847 1150 aa20.57■□□□□ 0.88
RTL6-201ENST00000341255 MCCP23508 829 aa20.56■□□□□ 0.88
RTL6-201ENST00000341255 GOLGA2Q08379 1002 aa20.56■□□□□ 0.88
RTL6-201ENST00000341255 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.54■□□□□ 0.88
RTL6-201ENST00000341255 U2AF1L5P0DN76 240 aaPredicted RBP20.54■□□□□ 0.88
RTL6-201ENST00000341255 U2AF1Q01081 240 aaKnown RBP eCLIP20.54■□□□□ 0.88
RTL6-201ENST00000341255 GBP4Q96PP9 640 aa20.54■□□□□ 0.88
RTL6-201ENST00000341255 CALD1Q05682 793 aaKnown RBP20.53■□□□□ 0.88
RTL6-201ENST00000341255 TRHP20396 242 aaPredicted RBP20.52■□□□□ 0.87
RTL6-201ENST00000341255 DRC7Q8IY82 874 aa20.51■□□□□ 0.87
RTL6-201ENST00000341255 RWDD1Q9H446 243 aaPredicted RBP20.51■□□□□ 0.87
RTL6-201ENST00000341255 APBB1O00213 710 aa20.5■□□□□ 0.87
RTL6-201ENST00000341255 EIF3AQ14152 1382 aaKnown RBP20.48■□□□□ 0.87
RTL6-201ENST00000341255 TULP1O00294 542 aaPredicted RBP20.48■□□□□ 0.87
RTL6-201ENST00000341255 ITPRIPQ8IWB1 547 aa20.47■□□□□ 0.87
RTL6-201ENST00000341255 PTMSP20962 102 aa20.47■□□□□ 0.87
RTL6-201ENST00000341255 L3MBTL2Q969R5 705 aa20.46■□□□□ 0.87
RTL6-201ENST00000341255 GOLGA6L3A6NEY3 463 aa20.45■□□□□ 0.86
RTL6-201ENST00000341255 RSPH4AQ5TD94 716 aa20.44■□□□□ 0.86
RTL6-201ENST00000341255 KIF3BO15066 747 aa20.44■□□□□ 0.86
RTL6-201ENST00000341255 MFAP1P55081 439 aaKnown RBP20.44■□□□□ 0.86
RTL6-201ENST00000341255 PMFBP1Q8TBY8 1022 aa20.43■□□□□ 0.86
RTL6-201ENST00000341255 ARID3AQ99856 593 aa20.42■□□□□ 0.86
RTL6-201ENST00000341255 RAPGEF2Q9Y4G8 1499 aa20.42■□□□□ 0.86
RTL6-201ENST00000341255 KIAA1211Q6ZU35 1233 aa20.41■□□□□ 0.86
RTL6-201ENST00000341255 CHMP4AQ9BY43 222 aa20.41■□□□□ 0.86
RTL6-201ENST00000341255 PAK3O75914 559 aaPredicted RBP20.41■□□□□ 0.86
RTL6-201ENST00000341255 KIAA2012Q0VF49 1180 aa20.41■□□□□ 0.86
RTL6-201ENST00000341255 NLRP13Q86W25 1043 aa20.4■□□□□ 0.86
RTL6-201ENST00000341255 HNRNPMP52272 730 aaKnown RBP eCLIP20.4■□□□□ 0.86
RTL6-201ENST00000341255 TERF2IPQ9NYB0 399 aa20.4■□□□□ 0.86
RTL6-201ENST00000341255 FHOD3Q2V2M9 1422 aa20.39■□□□□ 0.86
RTL6-201ENST00000341255 TOP2AP11388 1531 aaKnown RBP20.39■□□□□ 0.85
RTL6-201ENST00000341255 CCDC18Q5T9S5 1454 aa20.38■□□□□ 0.85
RTL6-201ENST00000341255 SPAG9O60271 1321 aaKnown RBP20.37■□□□□ 0.85
RTL6-201ENST00000341255 CADPSQ9ULU8 1353 aa20.36■□□□□ 0.85
RTL6-201ENST00000341255 PDE3BQ13370 1112 aa20.36■□□□□ 0.85
RTL6-201ENST00000341255 AMER1Q5JTC6 1135 aaPredicted RBP20.36■□□□□ 0.85
RTL6-201ENST00000341255 STK31Q9BXU1 1019 aa20.36■□□□□ 0.85
RTL6-201ENST00000341255 CCDC146Q8IYE0 955 aa20.35■□□□□ 0.85
RTL6-201ENST00000341255 CLUAP1Q96AJ1 413 aa20.35■□□□□ 0.85
RTL6-201ENST00000341255 CSB-PGBD3P0DP91 1061 aa20.34■□□□□ 0.85
RTL6-201ENST00000341255 SMC4Q9NTJ3 1288 aa20.34■□□□□ 0.85
RTL6-201ENST00000341255 SYAP1Q96A49 352 aaPredicted RBP20.33■□□□□ 0.84
RTL6-201ENST00000341255 FOXD4L1Q9NU39 408 aa20.31■□□□□ 0.84
RTL6-201ENST00000341255 WASHC2CQ9Y4E1 1318 aa20.31■□□□□ 0.84
RTL6-201ENST00000341255 DHX57Q6P158 1386 aaKnown RBP20.31■□□□□ 0.84
RTL6-201ENST00000341255 CENPJQ9HC77 1338 aaPredicted RBP20.3■□□□□ 0.84
RTL6-201ENST00000341255 USP35Q9P2H5 1018 aa20.3■□□□□ 0.84
RTL6-201ENST00000341255 GNL2Q13823 731 aaKnown RBP20.3■□□□□ 0.84
RTL6-201ENST00000341255 PHLDB1Q86UU1 1377 aa20.3■□□□□ 0.84
RTL6-201ENST00000341255 HDAC5Q9UQL6 1122 aa20.3■□□□□ 0.84
RTL6-201ENST00000341255 PDE4AP27815 886 aa20.3■□□□□ 0.84
RTL6-201ENST00000341255 HMMRO75330 724 aa20.29■□□□□ 0.84
RTL6-201ENST00000341255 JPH4Q96JJ6 628 aa20.28■□□□□ 0.84
RTL6-201ENST00000341255 WIZO95785 1651 aa20.28■□□□□ 0.84
RTL6-201ENST00000341255 SLC4A3P48751 1232 aa20.28■□□□□ 0.84
RTL6-201ENST00000341255 LMOD3Q0VAK6 560 aa20.27■□□□□ 0.84
RTL6-201ENST00000341255 ZNF330Q9Y3S2 320 aaPredicted RBP20.27■□□□□ 0.84
RTL6-201ENST00000341255 EID1Q9Y6B2 187 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms