RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 NCOA2Q15596 1464 aa20.64■□□□□ 0.89
TUBD1-202ENST00000340993 PLCH2O75038 1416 aa20.64■□□□□ 0.89
TUBD1-202ENST00000340993 MAP3K1Q13233 1512 aa20.62■□□□□ 0.89
TUBD1-202ENST00000340993 RAPGEF3O95398 923 aa20.61■□□□□ 0.89
TUBD1-202ENST00000340993 GPATCH8Q9UKJ3 1502 aaKnown RBP20.61■□□□□ 0.89
TUBD1-202ENST00000340993 AKNAQ7Z591 1439 aa20.6■□□□□ 0.89
TUBD1-202ENST00000340993 CFAP74Q9C0B2 1584 aa20.6■□□□□ 0.89
TUBD1-202ENST00000340993 EFCAB2Q5VUJ9 269 aa20.59■□□□□ 0.89
TUBD1-202ENST00000340993 CFDP1Q9UEE9 299 aaPredicted RBP20.58■□□□□ 0.89
TUBD1-202ENST00000340993 ADGRL1O94910 1474 aa20.58■□□□□ 0.88
TUBD1-202ENST00000340993 NEO1Q92859 1461 aa20.58■□□□□ 0.88
TUBD1-202ENST00000340993 ITSN2Q9NZM3 1697 aa20.56■□□□□ 0.88
TUBD1-202ENST00000340993 ZNF644Q9H582 1327 aaPredicted RBP20.55■□□□□ 0.88
TUBD1-202ENST00000340993 SCAPERQ9BY12 1400 aa20.54■□□□□ 0.88
TUBD1-202ENST00000340993 SAMD9LQ8IVG5 1584 aa20.54■□□□□ 0.88
TUBD1-202ENST00000340993 ARAP3Q8WWN8 1544 aa20.52■□□□□ 0.88
TUBD1-202ENST00000340993 FRMPD1Q5SYB0 1578 aa20.51■□□□□ 0.87
TUBD1-202ENST00000340993 PHLDB1Q86UU1 1377 aa20.51■□□□□ 0.87
TUBD1-202ENST00000340993 DENND4BO75064 1496 aaPredicted RBP20.51■□□□□ 0.87
TUBD1-202ENST00000340993 MYT1LQ9UL68 1186 aa20.51■□□□□ 0.87
TUBD1-202ENST00000340993 RICTORQ6R327 1708 aa20.5■□□□□ 0.87
TUBD1-202ENST00000340993 SYCP2Q9BX26 1530 aa20.5■□□□□ 0.87
TUBD1-202ENST00000340993 HNRNPMP52272 730 aaKnown RBP eCLIP20.5■□□□□ 0.87
TUBD1-202ENST00000340993 ABCC1P33527 1531 aa20.49■□□□□ 0.87
TUBD1-202ENST00000340993 AFAP1Q8N556 730 aa20.49■□□□□ 0.87
TUBD1-202ENST00000340993 ARHGEF12Q9NZN5 1544 aa20.48■□□□□ 0.87
TUBD1-202ENST00000340993 MYOM3Q5VTT5 1437 aa20.46■□□□□ 0.87
TUBD1-202ENST00000340993 CAMSAP2Q08AD1 1489 aa20.46■□□□□ 0.87
TUBD1-202ENST00000340993 POGZQ7Z3K3 1410 aa20.46■□□□□ 0.87
TUBD1-202ENST00000340993 TRAPPC8Q9Y2L5 1435 aa20.46■□□□□ 0.87
TUBD1-202ENST00000340993 PTPN23Q9H3S7 1636 aa20.4■□□□□ 0.86
TUBD1-202ENST00000340993 ZNF518AQ6AHZ1 1483 aa20.39■□□□□ 0.85
TUBD1-202ENST00000340993 YEATS2Q9ULM3 1422 aa20.39■□□□□ 0.85
TUBD1-202ENST00000340993 FAM50AQ14320 339 aaKnown RBP20.39■□□□□ 0.85
TUBD1-202ENST00000340993 FGD6Q6ZV73 1430 aa20.38■□□□□ 0.85
TUBD1-202ENST00000340993 PLEKHH2Q8IVE3 1493 aa20.36■□□□□ 0.85
TUBD1-202ENST00000340993 ZFYVE16Q7Z3T8 1539 aa20.35■□□□□ 0.85
TUBD1-202ENST00000340993 HECW2Q9P2P5 1572 aa20.35■□□□□ 0.85
TUBD1-202ENST00000340993 ZMYM4Q5VZL5 1548 aa20.34■□□□□ 0.85
TUBD1-202ENST00000340993 KDM5CP41229 1560 aa20.34■□□□□ 0.85
TUBD1-202ENST00000340993 MIA2Q96PC5 1412 aa20.34■□□□□ 0.85
TUBD1-202ENST00000340993 ARHGEF40Q8TER5 1519 aa20.33■□□□□ 0.84
TUBD1-202ENST00000340993 MBD5Q9P267 1494 aa20.33■□□□□ 0.84
TUBD1-202ENST00000340993 KIAA1107Q9UPP5 1409 aa20.33■□□□□ 0.84
TUBD1-202ENST00000340993 SPAG9O60271 1321 aaKnown RBP20.33■□□□□ 0.84
TUBD1-202ENST00000340993 ARID4BQ4LE39 1312 aaPredicted RBP20.32■□□□□ 0.84
TUBD1-202ENST00000340993 KIDINS220Q9ULH0 1771 aa20.31■□□□□ 0.84
TUBD1-202ENST00000340993 ABCA6Q8N139 1617 aa20.31■□□□□ 0.84
TUBD1-202ENST00000340993 ITGAEP38570 1179 aa20.31■□□□□ 0.84
TUBD1-202ENST00000340993 CCDC141Q6ZP82 1450 aa20.3■□□□□ 0.84
TUBD1-202ENST00000340993 SIGLEC1Q9BZZ2 1709 aa20.3■□□□□ 0.84
TUBD1-202ENST00000340993 ATP7AQ04656 1500 aa20.28■□□□□ 0.84
TUBD1-202ENST00000340993 MLECQ14165 292 aa20.28■□□□□ 0.84
TUBD1-202ENST00000340993 CHIC2Q9UKJ5 165 aa20.28■□□□□ 0.84
TUBD1-202ENST00000340993 DIP2CQ9Y2E4 1556 aa20.27■□□□□ 0.84
TUBD1-202ENST00000340993 ARHGEF5Q12774 1597 aa20.26■□□□□ 0.83
TUBD1-202ENST00000340993 INO80Q9ULG1 1556 aaPredicted RBP20.26■□□□□ 0.83
TUBD1-202ENST00000340993 TCOF1Q13428 1488 aaKnown RBP20.25■□□□□ 0.83
TUBD1-202ENST00000340993 TSPY4P0CV99 314 aa20.24■□□□□ 0.83
TUBD1-202ENST00000340993 TSPY10P0CW01 314 aa20.24■□□□□ 0.83
TUBD1-202ENST00000340993 MAGI2Q86UL8 1455 aa20.24■□□□□ 0.83
TUBD1-202ENST00000340993 MLH3Q9UHC1 1453 aa20.24■□□□□ 0.83
TUBD1-202ENST00000340993 CROCC2H7BZ55 1655 aa20.24■□□□□ 0.83
TUBD1-202ENST00000340993 DNMT1P26358 1616 aaKnown RBP20.23■□□□□ 0.83
TUBD1-202ENST00000340993 ABCC5O15440 1437 aa20.23■□□□□ 0.83
TUBD1-202ENST00000340993 ATP10AO60312 1499 aa20.22■□□□□ 0.83
TUBD1-202ENST00000340993 DAPK1P53355 1430 aa20.22■□□□□ 0.83
TUBD1-202ENST00000340993 C9orf84Q5VXU9 1444 aa20.22■□□□□ 0.83
TUBD1-202ENST00000340993 ADGBQ8N7X0 1667 aa20.2■□□□□ 0.82
TUBD1-202ENST00000340993 PLPPR3Q6T4P5 718 aa20.19■□□□□ 0.82
TUBD1-202ENST00000340993 RSPH4AQ5TD94 716 aa20.17■□□□□ 0.82
TUBD1-202ENST00000340993 RRP7BPQ9NSQ0 103 aa20.17■□□□□ 0.82
TUBD1-202ENST00000340993 KDM4FA0A1W2PPD8 638 aa20.15■□□□□ 0.82
TUBD1-202ENST00000340993 A2MP01023 1474 aa20.15■□□□□ 0.82
TUBD1-202ENST00000340993 PTPRKQ15262 1439 aa20.14■□□□□ 0.81
TUBD1-202ENST00000340993 RRBP1Q9P2E9 1410 aaKnown RBP20.14■□□□□ 0.81
TUBD1-202ENST00000340993 BCORL1Q5H9F3 1711 aa20.13■□□□□ 0.81
TUBD1-202ENST00000340993 MAST1Q9Y2H9 1570 aa20.13■□□□□ 0.81
TUBD1-202ENST00000340993 RTEL1-TNFRSF6BF6WH68 1400 aa20.13■□□□□ 0.81
TUBD1-202ENST00000340993 SHANK2Q9UPX8 1470 aa20.11■□□□□ 0.81
TUBD1-202ENST00000340993 MADDQ8WXG6 1647 aa20.1■□□□□ 0.81
TUBD1-202ENST00000340993 KIF15Q9NS87 1388 aa20.1■□□□□ 0.81
TUBD1-202ENST00000340993 GGT6Q6P531 493 aa20.1■□□□□ 0.81
TUBD1-202ENST00000340993 PLXNC1O60486 1568 aa20.08■□□□□ 0.81
TUBD1-202ENST00000340993 RIMS1Q86UR5 1692 aaKnown RBP20.08■□□□□ 0.81
TUBD1-202ENST00000340993 FER1L4A9Z1Z3 1794 aa20.08■□□□□ 0.81
TUBD1-202ENST00000340993 KIF3BO15066 747 aa20.08■□□□□ 0.8
TUBD1-202ENST00000340993 ANKRD30AQ9BXX3 1397 aa20.07■□□□□ 0.8
TUBD1-202ENST00000340993 REREQ9P2R6 1566 aa20.07■□□□□ 0.8
TUBD1-202ENST00000340993 DHX29Q7Z478 1369 aaKnown RBP20.06■□□□□ 0.8
TUBD1-202ENST00000340993 ADAMTSL3P82987 1691 aa20.06■□□□□ 0.8
TUBD1-202ENST00000340993 NCOA1Q15788 1441 aa20.03■□□□□ 0.8
TUBD1-202ENST00000340993 DUOX2Q9NRD8 1548 aa20.02■□□□□ 0.8
TUBD1-202ENST00000340993 AGLP35573 1532 aa20.02■□□□□ 0.79
TUBD1-202ENST00000340993 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.02■□□□□ 0.79
TUBD1-202ENST00000340993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.01■□□□□ 0.79
TUBD1-202ENST00000340993 ESF1Q9H501 851 aaKnown RBP20■□□□□ 0.79
TUBD1-202ENST00000340993 ADGRL2O95490 1459 aa20■□□□□ 0.79
TUBD1-202ENST00000340993 CLTCQ00610 1675 aaKnown RBP19.99■□□□□ 0.79
TUBD1-202ENST00000340993 CEBPAP49715 358 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms