RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 FOXD1Q16676 465 aa16.65■□□□□ 0.26
C2orf88-201ENST00000340623 BCANQ96GW7 911 aa16.63■□□□□ 0.25
C2orf88-201ENST00000340623 NUP153P49790 1475 aaKnown RBP16.63■□□□□ 0.25
C2orf88-201ENST00000340623 RGL3Q3MIN7 710 aa16.62■□□□□ 0.25
C2orf88-201ENST00000340623 CHD1O14646 1710 aa16.62■□□□□ 0.25
C2orf88-201ENST00000340623 AFAP1Q8N556 730 aa16.62■□□□□ 0.25
C2orf88-201ENST00000340623 KIF3BO15066 747 aa16.61■□□□□ 0.25
C2orf88-201ENST00000340623 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
C2orf88-201ENST00000340623 ARHGAP5Q13017 1502 aa16.61■□□□□ 0.25
C2orf88-201ENST00000340623 ATP10BO94823 1461 aa16.6■□□□□ 0.25
C2orf88-201ENST00000340623 RAPGEF6Q8TEU7 1601 aa16.6■□□□□ 0.25
C2orf88-201ENST00000340623 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
C2orf88-201ENST00000340623 NUP155O75694 1391 aa16.59■□□□□ 0.25
C2orf88-201ENST00000340623 RRBP1Q9P2E9 1410 aaKnown RBP16.58■□□□□ 0.25
C2orf88-201ENST00000340623 PKD2Q13563 968 aa16.58■□□□□ 0.24
C2orf88-201ENST00000340623 SUPT6HQ7KZ85 1726 aaKnown RBP16.57■□□□□ 0.24
C2orf88-201ENST00000340623 MPHOSPH9Q99550 1183 aa16.56■□□□□ 0.24
C2orf88-201ENST00000340623 ACIN1Q9UKV3 1341 aaKnown RBP16.56■□□□□ 0.24
C2orf88-201ENST00000340623 MAP3K1Q13233 1512 aa16.56■□□□□ 0.24
C2orf88-201ENST00000340623 SAMD9Q5K651 1589 aa16.55■□□□□ 0.24
C2orf88-201ENST00000340623 MIA2Q96PC5 1412 aa16.53■□□□□ 0.24
C2orf88-201ENST00000340623 ZNF316A6NFI3 1004 aaPredicted RBP16.53■□□□□ 0.24
C2orf88-201ENST00000340623 KANK1Q14678 1352 aa16.53■□□□□ 0.24
C2orf88-201ENST00000340623 GTF3C3Q9Y5Q9 886 aa16.52■□□□□ 0.24
C2orf88-201ENST00000340623 KIF15Q9NS87 1388 aa16.5■□□□□ 0.23
C2orf88-201ENST00000340623 RAPGEF3O95398 923 aa16.5■□□□□ 0.23
C2orf88-201ENST00000340623 HIRIP3Q9BW71 556 aaPredicted RBP16.5■□□□□ 0.23
C2orf88-201ENST00000340623 KIF14Q15058 1648 aa16.48■□□□□ 0.23
C2orf88-201ENST00000340623 ASXL2Q76L83 1435 aa16.48■□□□□ 0.23
C2orf88-201ENST00000340623 CD109Q6YHK3 1445 aa16.48■□□□□ 0.23
C2orf88-201ENST00000340623 ERCC6L2Q5T890 1561 aa16.47■□□□□ 0.23
C2orf88-201ENST00000340623 CLSPNQ9HAW4 1339 aa16.47■□□□□ 0.23
C2orf88-201ENST00000340623 SCAPERQ9BY12 1400 aa16.46■□□□□ 0.23
C2orf88-201ENST00000340623 ABCC2Q92887 1545 aa16.45■□□□□ 0.22
C2orf88-201ENST00000340623 DHX57Q6P158 1386 aaKnown RBP16.45■□□□□ 0.22
C2orf88-201ENST00000340623 WASHC2CQ9Y4E1 1318 aa16.44■□□□□ 0.22
C2orf88-201ENST00000340623 C9orf84Q5VXU9 1444 aa16.43■□□□□ 0.22
C2orf88-201ENST00000340623 ANKRD50Q9ULJ7 1429 aa16.43■□□□□ 0.22
C2orf88-201ENST00000340623 GPATCH8Q9UKJ3 1502 aaKnown RBP16.43■□□□□ 0.22
C2orf88-201ENST00000340623 DAPK1P53355 1430 aa16.42■□□□□ 0.22
C2orf88-201ENST00000340623 CAMSAP2Q08AD1 1489 aa16.41■□□□□ 0.22
C2orf88-201ENST00000340623 DCAF11Q8TEB1 546 aa16.41■□□□□ 0.22
C2orf88-201ENST00000340623 PPP1R15AO75807 674 aaPredicted RBP16.4■□□□□ 0.22
C2orf88-201ENST00000340623 PTPN23Q9H3S7 1636 aa16.4■□□□□ 0.22
C2orf88-201ENST00000340623 PLEKHH2Q8IVE3 1493 aa16.39■□□□□ 0.21
C2orf88-201ENST00000340623 WDR7Q9Y4E6 1490 aa16.39■□□□□ 0.21
C2orf88-201ENST00000340623 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.37■□□□□ 0.21
C2orf88-201ENST00000340623 CFAP43Q8NDM7 1665 aa16.37■□□□□ 0.21
C2orf88-201ENST00000340623 ABCC5O15440 1437 aa16.37■□□□□ 0.21
C2orf88-201ENST00000340623 FANCAO15360 1455 aa16.36■□□□□ 0.21
C2orf88-201ENST00000340623 ADGRL1O94910 1474 aa16.35■□□□□ 0.21
C2orf88-201ENST00000340623 MAGI3Q5TCQ9 1506 aa16.34■□□□□ 0.21
C2orf88-201ENST00000340623 ABCA8O94911 1581 aa16.34■□□□□ 0.21
C2orf88-201ENST00000340623 CCDC141Q6ZP82 1450 aa16.34■□□□□ 0.21
C2orf88-201ENST00000340623 HFM1A2PYH4 1435 aa16.34■□□□□ 0.21
C2orf88-201ENST00000340623 EIF4G2P78344 907 aaKnown RBP eCLIP16.33■□□□□ 0.21
C2orf88-201ENST00000340623 DDX10Q13206 875 aaKnown RBP16.33■□□□□ 0.21
C2orf88-201ENST00000340623 PLCH2O75038 1416 aa16.33■□□□□ 0.2
C2orf88-201ENST00000340623 NAIPQ13075 1403 aa16.32■□□□□ 0.2
C2orf88-201ENST00000340623 L3MBTL2Q969R5 705 aa16.32■□□□□ 0.2
C2orf88-201ENST00000340623 CARD11Q9BXL7 1154 aa16.31■□□□□ 0.2
C2orf88-201ENST00000340623 CLASP1Q7Z460 1538 aa16.3■□□□□ 0.2
C2orf88-201ENST00000340623 PTPRKQ15262 1439 aa16.29■□□□□ 0.2
C2orf88-201ENST00000340623 AKNAQ7Z591 1439 aa16.29■□□□□ 0.2
C2orf88-201ENST00000340623 TIMELESSQ9UNS1 1208 aa16.28■□□□□ 0.2
C2orf88-201ENST00000340623 MIER1Q8N108 512 aa16.27■□□□□ 0.2
C2orf88-201ENST00000340623 NUTM2DQ5VT03 806 aaPredicted RBP16.27■□□□□ 0.2
C2orf88-201ENST00000340623 ANP32CO43423 234 aa16.26■□□□□ 0.19
C2orf88-201ENST00000340623 NCOA1Q15788 1441 aa16.26■□□□□ 0.19
C2orf88-201ENST00000340623 ROCK1Q13464 1354 aa16.26■□□□□ 0.19
C2orf88-201ENST00000340623 CCDC144AA2RUR9 1427 aa16.25■□□□□ 0.19
C2orf88-201ENST00000340623 KDM5BQ9UGL1 1544 aa16.25■□□□□ 0.19
C2orf88-201ENST00000340623 UHRF1BP1LA0JNW5 1464 aa16.25■□□□□ 0.19
C2orf88-201ENST00000340623 BCL11AQ9H165 835 aa16.24■□□□□ 0.19
C2orf88-201ENST00000340623 SYCP2Q9BX26 1530 aa16.24■□□□□ 0.19
C2orf88-201ENST00000340623 DENND4BO75064 1496 aaPredicted RBP16.23■□□□□ 0.19
C2orf88-201ENST00000340623 TRAPPC8Q9Y2L5 1435 aa16.23■□□□□ 0.19
C2orf88-201ENST00000340623 ITSN2Q9NZM3 1697 aa16.22■□□□□ 0.19
C2orf88-201ENST00000340623 TCOF1Q13428 1488 aaKnown RBP16.17■□□□□ 0.18
C2orf88-201ENST00000340623 ZCCHC11Q5TAX3 1644 aaKnown RBP16.17■□□□□ 0.18
C2orf88-201ENST00000340623 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.17■□□□□ 0.18
C2orf88-201ENST00000340623 KIAA1107Q9UPP5 1409 aa16.16■□□□□ 0.18
C2orf88-201ENST00000340623 STK26Q9P289 416 aa16.16■□□□□ 0.18
C2orf88-201ENST00000340623 ABCC10Q5T3U5 1492 aa16.15■□□□□ 0.18
C2orf88-201ENST00000340623 SAFB2Q14151 953 aaKnown RBP eCLIP16.15■□□□□ 0.18
C2orf88-201ENST00000340623 HSPA5P11021 654 aaKnown RBP16.14■□□□□ 0.17
C2orf88-201ENST00000340623 NEFLP07196 543 aa16.13■□□□□ 0.17
C2orf88-201ENST00000340623 SHROOM2Q13796 1616 aa16.13■□□□□ 0.17
C2orf88-201ENST00000340623 POGKQ9P215 609 aa16.13■□□□□ 0.17
C2orf88-201ENST00000340623 TEX14Q8IWB6 1497 aa16.13■□□□□ 0.17
C2orf88-201ENST00000340623 HDGFP51858 240 aaKnown RBP16.13■□□□□ 0.17
C2orf88-201ENST00000340623 TMC1Q8TDI8 760 aa16.12■□□□□ 0.17
C2orf88-201ENST00000340623 ROCK2O75116 1388 aaKnown RBP16.12■□□□□ 0.17
C2orf88-201ENST00000340623 C14orf37Q86TY3 774 aa16.11■□□□□ 0.17
C2orf88-201ENST00000340623 DNAJC5Q9H3Z4 198 aa16.11■□□□□ 0.17
C2orf88-201ENST00000340623 ZNF518AQ6AHZ1 1483 aa16.11■□□□□ 0.17
C2orf88-201ENST00000340623 DHX29Q7Z478 1369 aaKnown RBP16.1■□□□□ 0.17
C2orf88-201ENST00000340623 TTC37Q6PGP7 1564 aa16.1■□□□□ 0.17
C2orf88-201ENST00000340623 ADCY10Q96PN6 1610 aa16.09■□□□□ 0.17
C2orf88-201ENST00000340623 RIMBP3CA6NJZ7 1639 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms