RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 PLEKHD1A6NEE1 506 aa10.91□□□□□ -0.66
NUP43-201ENST00000340413 KIAA1107Q9UPP5 1409 aa10.91□□□□□ -0.66
NUP43-201ENST00000340413 TTC37Q6PGP7 1564 aa10.89□□□□□ -0.67
NUP43-201ENST00000340413 CLSPNQ9HAW4 1339 aa10.88□□□□□ -0.67
NUP43-201ENST00000340413 RSPH4AQ5TD94 716 aa10.88□□□□□ -0.67
NUP43-201ENST00000340413 CAMSAP2Q08AD1 1489 aa10.88□□□□□ -0.67
NUP43-201ENST00000340413 PLXNC1O60486 1568 aa10.88□□□□□ -0.67
NUP43-201ENST00000340413 PLCH2O75038 1416 aa10.87□□□□□ -0.67
NUP43-201ENST00000340413 MAP3K4Q9Y6R4 1608 aa10.86□□□□□ -0.67
NUP43-201ENST00000340413 HFM1A2PYH4 1435 aa10.86□□□□□ -0.67
NUP43-201ENST00000340413 SAMD9LQ8IVG5 1584 aa10.86□□□□□ -0.67
NUP43-201ENST00000340413 ABCC1P33527 1531 aa10.85□□□□□ -0.67
NUP43-201ENST00000340413 DAPK1P53355 1430 aa10.84□□□□□ -0.67
NUP43-201ENST00000340413 ZEB1P37275 1124 aaPredicted RBP10.84□□□□□ -0.67
NUP43-201ENST00000340413 PCGF6Q9BYE7 350 aa10.84□□□□□ -0.67
NUP43-201ENST00000340413 ASXL2Q76L83 1435 aa10.83□□□□□ -0.68
NUP43-201ENST00000340413 NEO1Q92859 1461 aa10.82□□□□□ -0.68
NUP43-201ENST00000340413 CCDC141Q6ZP82 1450 aa10.82□□□□□ -0.68
NUP43-201ENST00000340413 SETD5Q9C0A6 1442 aa10.82□□□□□ -0.68
NUP43-201ENST00000340413 RTEL1-TNFRSF6BF6WH68 1400 aa10.81□□□□□ -0.68
NUP43-201ENST00000340413 BCORL1Q5H9F3 1711 aa10.81□□□□□ -0.68
NUP43-201ENST00000340413 ATP1B4Q9UN42 357 aaPredicted RBP10.81□□□□□ -0.68
NUP43-201ENST00000340413 KDM5DQ9BY66 1539 aa10.81□□□□□ -0.68
NUP43-201ENST00000340413 MBD5Q9P267 1494 aa10.81□□□□□ -0.68
NUP43-201ENST00000340413 ABCC5O15440 1437 aa10.8□□□□□ -0.68
NUP43-201ENST00000340413 ARHGAP5Q13017 1502 aa10.8□□□□□ -0.68
NUP43-201ENST00000340413 EIF2AK4Q9P2K8 1649 aaKnown RBP10.79□□□□□ -0.68
NUP43-201ENST00000340413 DIP2BQ9P265 1576 aa10.79□□□□□ -0.68
NUP43-201ENST00000340413 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
NUP43-201ENST00000340413 INO80Q9ULG1 1556 aaPredicted RBP10.78□□□□□ -0.68
NUP43-201ENST00000340413 KDM5CP41229 1560 aa10.77□□□□□ -0.69
NUP43-201ENST00000340413 NAIPQ13075 1403 aa10.77□□□□□ -0.69
NUP43-201ENST00000340413 UNC13BO14795 1591 aa10.76□□□□□ -0.69
NUP43-201ENST00000340413 CFDP1Q9UEE9 299 aaPredicted RBP10.76□□□□□ -0.69
NUP43-201ENST00000340413 FAM135AQ9P2D6 1515 aa10.75□□□□□ -0.69
NUP43-201ENST00000340413 TEX14Q8IWB6 1497 aa10.75□□□□□ -0.69
NUP43-201ENST00000340413 DUOX2Q9NRD8 1548 aa10.75□□□□□ -0.69
NUP43-201ENST00000340413 ZMYM4Q5VZL5 1548 aa10.74□□□□□ -0.69
NUP43-201ENST00000340413 PTPRKQ15262 1439 aa10.74□□□□□ -0.69
NUP43-201ENST00000340413 SYCP2Q9BX26 1530 aa10.74□□□□□ -0.69
NUP43-201ENST00000340413 ANKRD30AQ9BXX3 1397 aa10.74□□□□□ -0.69
NUP43-201ENST00000340413 EFCAB2Q5VUJ9 269 aa10.74□□□□□ -0.69
NUP43-201ENST00000340413 REREQ9P2R6 1566 aa10.73□□□□□ -0.69
NUP43-201ENST00000340413 MAGI2Q86UL8 1455 aa10.73□□□□□ -0.69
NUP43-201ENST00000340413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.73□□□□□ -0.69
NUP43-201ENST00000340413 HNRNPUL2Q1KMD3 747 aaKnown RBP10.73□□□□□ -0.69
NUP43-201ENST00000340413 ERBINQ96RT1 1412 aa10.73□□□□□ -0.69
NUP43-201ENST00000340413 NCOA1Q15788 1441 aa10.73□□□□□ -0.69
NUP43-201ENST00000340413 C9orf84Q5VXU9 1444 aa10.73□□□□□ -0.69
NUP43-201ENST00000340413 FANCAO15360 1455 aa10.73□□□□□ -0.69
NUP43-201ENST00000340413 DEPDC5O75140 1603 aa10.72□□□□□ -0.69
NUP43-201ENST00000340413 ZFYVE16Q7Z3T8 1539 aa10.72□□□□□ -0.69
NUP43-201ENST00000340413 PPRC1Q5VV67 1664 aaKnown RBP10.72□□□□□ -0.69
NUP43-201ENST00000340413 KIF13AQ9H1H9 1805 aa10.71□□□□□ -0.69
NUP43-201ENST00000340413 PPARGC1BQ86YN6 1023 aaKnown RBP10.71□□□□□ -0.69
NUP43-201ENST00000340413 ZNF518AQ6AHZ1 1483 aa10.71□□□□□ -0.69
NUP43-201ENST00000340413 RAB3GAP2Q9H2M9 1393 aa10.71□□□□□ -0.7
NUP43-201ENST00000340413 MLH3Q9UHC1 1453 aa10.71□□□□□ -0.7
NUP43-201ENST00000340413 RICTORQ6R327 1708 aa10.7□□□□□ -0.7
NUP43-201ENST00000340413 CD109Q6YHK3 1445 aa10.7□□□□□ -0.7
NUP43-201ENST00000340413 HECW2Q9P2P5 1572 aa10.69□□□□□ -0.7
NUP43-201ENST00000340413 IQGAP3Q86VI3 1631 aa10.69□□□□□ -0.7
NUP43-201ENST00000340413 FAM50AQ14320 339 aaKnown RBP10.69□□□□□ -0.7
NUP43-201ENST00000340413 RNF17Q9BXT8 1623 aaKnown RBP10.69□□□□□ -0.7
NUP43-201ENST00000340413 DHX57Q6P158 1386 aaKnown RBP10.68□□□□□ -0.7
NUP43-201ENST00000340413 ATP7AQ04656 1500 aa10.68□□□□□ -0.7
NUP43-201ENST00000340413 TIMELESSQ9UNS1 1208 aa10.68□□□□□ -0.7
NUP43-201ENST00000340413 ARHGEF12Q9NZN5 1544 aa10.68□□□□□ -0.7
NUP43-201ENST00000340413 POGZQ7Z3K3 1410 aa10.68□□□□□ -0.7
NUP43-201ENST00000340413 ADGRL1O94910 1474 aa10.68□□□□□ -0.7
NUP43-201ENST00000340413 VWDEQ8N2E2 1590 aa10.66□□□□□ -0.7
NUP43-201ENST00000340413 NEURL4Q96JN8 1562 aa10.66□□□□□ -0.7
NUP43-201ENST00000340413 KIDINS220Q9ULH0 1771 aa10.66□□□□□ -0.7
NUP43-201ENST00000340413 ZC3H13Q5T200 1668 aaKnown RBP10.65□□□□□ -0.7
NUP43-201ENST00000340413 LMTK2Q8IWU2 1503 aa10.64□□□□□ -0.71
NUP43-201ENST00000340413 TSPY4P0CV99 314 aa10.64□□□□□ -0.71
NUP43-201ENST00000340413 TSPY10P0CW01 314 aa10.64□□□□□ -0.71
NUP43-201ENST00000340413 PRDM15P57071 1507 aaPredicted RBP10.64□□□□□ -0.71
NUP43-201ENST00000340413 DENND4BO75064 1496 aaPredicted RBP10.63□□□□□ -0.71
NUP43-201ENST00000340413 ANKRD50Q9ULJ7 1429 aa10.63□□□□□ -0.71
NUP43-201ENST00000340413 FRMPD1Q5SYB0 1578 aa10.63□□□□□ -0.71
NUP43-201ENST00000340413 TTBK1Q5TCY1 1321 aaPredicted RBP10.63□□□□□ -0.71
NUP43-201ENST00000340413 KDM6BO15054 1643 aa10.62□□□□□ -0.71
NUP43-201ENST00000340413 AGLP35573 1532 aa10.62□□□□□ -0.71
NUP43-201ENST00000340413 KIF15Q9NS87 1388 aa10.61□□□□□ -0.71
NUP43-201ENST00000340413 ATP10AO60312 1499 aa10.61□□□□□ -0.71
NUP43-201ENST00000340413 TET3O43151 1660 aa10.61□□□□□ -0.71
NUP43-201ENST00000340413 SCAPERQ9BY12 1400 aa10.61□□□□□ -0.71
NUP43-201ENST00000340413 TRAPPC8Q9Y2L5 1435 aa10.61□□□□□ -0.71
NUP43-201ENST00000340413 PZPP20742 1482 aa10.6□□□□□ -0.71
NUP43-201ENST00000340413 ARID3CA6NKF2 412 aa10.59□□□□□ -0.71
NUP43-201ENST00000340413 DIP2CQ9Y2E4 1556 aa10.59□□□□□ -0.71
NUP43-201ENST00000340413 ZNF644Q9H582 1327 aaPredicted RBP10.59□□□□□ -0.71
NUP43-201ENST00000340413 ABCA6Q8N139 1617 aa10.59□□□□□ -0.71
NUP43-201ENST00000340413 ARHGEF40Q8TER5 1519 aa10.58□□□□□ -0.72
NUP43-201ENST00000340413 DHX29Q7Z478 1369 aaKnown RBP10.57□□□□□ -0.72
NUP43-201ENST00000340413 MROH1Q8NDA8 1641 aa10.57□□□□□ -0.72
NUP43-201ENST00000340413 CYB5RLQ6IPT4 315 aa10.57□□□□□ -0.72
NUP43-201ENST00000340413 SPAG9O60271 1321 aaKnown RBP10.56□□□□□ -0.72
NUP43-201ENST00000340413 RPRD2Q5VT52 1461 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms