RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 PREX2Q70Z35 1606 aa23.39■■□□□ 1.33
ERCC1-203ENST00000340192 CDC42BPAQ5VT25 1732 aa23.37■■□□□ 1.33
ERCC1-203ENST00000340192 SCAPERQ9BY12 1400 aa23.36■■□□□ 1.33
ERCC1-203ENST00000340192 ZMYM4Q5VZL5 1548 aa23.35■■□□□ 1.33
ERCC1-203ENST00000340192 POGZQ7Z3K3 1410 aa23.33■■□□□ 1.33
ERCC1-203ENST00000340192 ARHGEF40Q8TER5 1519 aa23.33■■□□□ 1.33
ERCC1-203ENST00000340192 MTUS2Q5JR59 1369 aa23.31■■□□□ 1.32
ERCC1-203ENST00000340192 VPS8Q8N3P4 1428 aa23.3■■□□□ 1.32
ERCC1-203ENST00000340192 EHBP1L1Q8N3D4 1523 aa23.28■■□□□ 1.32
ERCC1-203ENST00000340192 ZFYVE16Q7Z3T8 1539 aa23.28■■□□□ 1.32
ERCC1-203ENST00000340192 MAGI2Q86UL8 1455 aa23.27■■□□□ 1.32
ERCC1-203ENST00000340192 ZNF518AQ6AHZ1 1483 aa23.26■■□□□ 1.31
ERCC1-203ENST00000340192 ABCC1P33527 1531 aa23.26■■□□□ 1.31
ERCC1-203ENST00000340192 GPATCH8Q9UKJ3 1502 aaKnown RBP23.26■■□□□ 1.31
ERCC1-203ENST00000340192 ITSN2Q9NZM3 1697 aa23.25■■□□□ 1.31
ERCC1-203ENST00000340192 YEATS2Q9ULM3 1422 aa23.25■■□□□ 1.31
ERCC1-203ENST00000340192 TIAM1Q13009 1591 aa23.24■■□□□ 1.31
ERCC1-203ENST00000340192 KDM5CP41229 1560 aa23.23■■□□□ 1.31
ERCC1-203ENST00000340192 CCNB3Q8WWL7 1395 aa23.22■■□□□ 1.31
ERCC1-203ENST00000340192 ARHGEF12Q9NZN5 1544 aa23.22■■□□□ 1.31
ERCC1-203ENST00000340192 SAMD9LQ8IVG5 1584 aa23.22■■□□□ 1.31
ERCC1-203ENST00000340192 BCORL1Q5H9F3 1711 aa23.22■■□□□ 1.31
ERCC1-203ENST00000340192 SIGLEC1Q9BZZ2 1709 aa23.21■■□□□ 1.31
ERCC1-203ENST00000340192 ADAMTSL3P82987 1691 aa23.2■■□□□ 1.3
ERCC1-203ENST00000340192 ARID4BQ4LE39 1312 aaPredicted RBP23.2■■□□□ 1.3
ERCC1-203ENST00000340192 AFAP1Q8N556 730 aa23.2■■□□□ 1.3
ERCC1-203ENST00000340192 SUPT6HQ7KZ85 1726 aaKnown RBP23.19■■□□□ 1.3
ERCC1-203ENST00000340192 HECW2Q9P2P5 1572 aa23.18■■□□□ 1.3
ERCC1-203ENST00000340192 ZNF777Q9ULD5 760 aaPredicted RBP23.18■■□□□ 1.3
ERCC1-203ENST00000340192 TRAPPC8Q9Y2L5 1435 aa23.17■■□□□ 1.3
ERCC1-203ENST00000340192 CFDP1Q9UEE9 299 aaPredicted RBP23.16■■□□□ 1.3
ERCC1-203ENST00000340192 SYCP2Q9BX26 1530 aa23.16■■□□□ 1.3
ERCC1-203ENST00000340192 ATP10AO60312 1499 aa23.15■■□□□ 1.3
ERCC1-203ENST00000340192 NCOA2Q15596 1464 aa23.13■■□□□ 1.29
ERCC1-203ENST00000340192 LRRC9Q6ZRR7 1453 aa23.13■■□□□ 1.29
ERCC1-203ENST00000340192 MAP3K1Q13233 1512 aa23.13■■□□□ 1.29
ERCC1-203ENST00000340192 MLH3Q9UHC1 1453 aa23.12■■□□□ 1.29
ERCC1-203ENST00000340192 MADDQ8WXG6 1647 aa23.12■■□□□ 1.29
ERCC1-203ENST00000340192 C9orf84Q5VXU9 1444 aa23.12■■□□□ 1.29
ERCC1-203ENST00000340192 DIP2CQ9Y2E4 1556 aa23.12■■□□□ 1.29
ERCC1-203ENST00000340192 ABCA6Q8N139 1617 aa23.11■■□□□ 1.29
ERCC1-203ENST00000340192 MYT1LQ9UL68 1186 aa23.11■■□□□ 1.29
ERCC1-203ENST00000340192 PLEKHH2Q8IVE3 1493 aa23.11■■□□□ 1.29
ERCC1-203ENST00000340192 KIDINS220Q9ULH0 1771 aa23.1■■□□□ 1.29
ERCC1-203ENST00000340192 KIAA1107Q9UPP5 1409 aa23.09■■□□□ 1.29
ERCC1-203ENST00000340192 HNRNPMP52272 730 aaKnown RBP eCLIP23.09■■□□□ 1.29
ERCC1-203ENST00000340192 RIMS1Q86UR5 1692 aaKnown RBP23.06■■□□□ 1.28
ERCC1-203ENST00000340192 PTPRMP28827 1452 aa23.06■■□□□ 1.28
ERCC1-203ENST00000340192 KANK4Q5T7N3 995 aaPredicted RBP23.06■■□□□ 1.28
ERCC1-203ENST00000340192 ZNF644Q9H582 1327 aaPredicted RBP23.06■■□□□ 1.28
ERCC1-203ENST00000340192 REREQ9P2R6 1566 aa23.05■■□□□ 1.28
ERCC1-203ENST00000340192 FER1L4A9Z1Z3 1794 aa23.04■■□□□ 1.28
ERCC1-203ENST00000340192 MLECQ14165 292 aa23.02■■□□□ 1.28
ERCC1-203ENST00000340192 INO80Q9ULG1 1556 aaPredicted RBP23.01■■□□□ 1.27
ERCC1-203ENST00000340192 ATP7AQ04656 1500 aa23.01■■□□□ 1.27
ERCC1-203ENST00000340192 SPAG9O60271 1321 aaKnown RBP23.01■■□□□ 1.27
ERCC1-203ENST00000340192 CAMSAP2Q08AD1 1489 aa22.99■■□□□ 1.27
ERCC1-203ENST00000340192 MBD5Q9P267 1494 aa22.99■■□□□ 1.27
ERCC1-203ENST00000340192 APLP2Q06481 763 aa22.99■■□□□ 1.27
ERCC1-203ENST00000340192 AGLP35573 1532 aa22.96■■□□□ 1.27
ERCC1-203ENST00000340192 MYOM3Q5VTT5 1437 aa22.92■■□□□ 1.26
ERCC1-203ENST00000340192 ADGBQ8N7X0 1667 aa22.92■■□□□ 1.26
ERCC1-203ENST00000340192 CCDC141Q6ZP82 1450 aa22.92■■□□□ 1.26
ERCC1-203ENST00000340192 PLXNC1O60486 1568 aa22.9■■□□□ 1.26
ERCC1-203ENST00000340192 ARHGEF5Q12774 1597 aa22.9■■□□□ 1.26
ERCC1-203ENST00000340192 RTEL1-TNFRSF6BF6WH68 1400 aa22.89■■□□□ 1.25
ERCC1-203ENST00000340192 A2MP01023 1474 aa22.88■■□□□ 1.25
ERCC1-203ENST00000340192 PLPPR3Q6T4P5 718 aa22.88■■□□□ 1.25
ERCC1-203ENST00000340192 MIA2Q96PC5 1412 aa22.88■■□□□ 1.25
ERCC1-203ENST00000340192 RSPH4AQ5TD94 716 aa22.86■■□□□ 1.25
ERCC1-203ENST00000340192 PTPN23Q9H3S7 1636 aa22.81■■□□□ 1.24
ERCC1-203ENST00000340192 C3P01024 1663 aa22.81■■□□□ 1.24
ERCC1-203ENST00000340192 LMTK3Q96Q04 1460 aa22.8■■□□□ 1.24
ERCC1-203ENST00000340192 TSPY4P0CV99 314 aa22.79■■□□□ 1.24
ERCC1-203ENST00000340192 TSPY10P0CW01 314 aa22.79■■□□□ 1.24
ERCC1-203ENST00000340192 CEBPAP49715 358 aaPredicted RBP22.79■■□□□ 1.24
ERCC1-203ENST00000340192 ESF1Q9H501 851 aaKnown RBP22.79■■□□□ 1.24
ERCC1-203ENST00000340192 MAST1Q9Y2H9 1570 aa22.79■■□□□ 1.24
ERCC1-203ENST00000340192 DHX29Q7Z478 1369 aaKnown RBP22.77■■□□□ 1.24
ERCC1-203ENST00000340192 FGD6Q6ZV73 1430 aa22.76■■□□□ 1.23
ERCC1-203ENST00000340192 CNTLNQ9NXG0 1405 aa22.76■■□□□ 1.23
ERCC1-203ENST00000340192 MROH2AA6NES4 1674 aa22.76■■□□□ 1.23
ERCC1-203ENST00000340192 CROCC2H7BZ55 1655 aa22.75■■□□□ 1.23
ERCC1-203ENST00000340192 CLTCQ00610 1675 aaKnown RBP22.75■■□□□ 1.23
ERCC1-203ENST00000340192 PREX1Q8TCU6 1659 aa22.75■■□□□ 1.23
ERCC1-203ENST00000340192 GGT6Q6P531 493 aa22.73■■□□□ 1.23
ERCC1-203ENST00000340192 TCOF1Q13428 1488 aaKnown RBP22.73■■□□□ 1.23
ERCC1-203ENST00000340192 DNMT1P26358 1616 aaKnown RBP22.71■■□□□ 1.23
ERCC1-203ENST00000340192 SETD1BQ9UPS6 1966 aaKnown RBP22.69■■□□□ 1.22
ERCC1-203ENST00000340192 ABCC5O15440 1437 aa22.68■■□□□ 1.22
ERCC1-203ENST00000340192 KIF3BO15066 747 aa22.68■■□□□ 1.22
ERCC1-203ENST00000340192 SHANK2Q9UPX8 1470 aa22.67■■□□□ 1.22
ERCC1-203ENST00000340192 ZMYM3Q14202 1370 aa22.67■■□□□ 1.22
ERCC1-203ENST00000340192 PPP6R1Q9UPN7 881 aa22.67■■□□□ 1.22
ERCC1-203ENST00000340192 DAPK1P53355 1430 aa22.66■■□□□ 1.22
ERCC1-203ENST00000340192 HSPA2P54652 639 aa22.66■■□□□ 1.22
ERCC1-203ENST00000340192 EIF2AK4Q9P2K8 1649 aaKnown RBP22.64■■□□□ 1.21
ERCC1-203ENST00000340192 RNF17Q9BXT8 1623 aaKnown RBP22.63■■□□□ 1.21
ERCC1-203ENST00000340192 UHRF1BP1Q6BDS2 1440 aa22.63■■□□□ 1.21
ERCC1-203ENST00000340192 DUOX2Q9NRD8 1548 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms