RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 ARHGAP5Q13017 1502 aa26.19■■□□□ 1.78
SFN-201ENST00000339276 GPATCH8Q9UKJ3 1502 aaKnown RBP26.18■■□□□ 1.78
SFN-201ENST00000339276 CCNB3Q8WWL7 1395 aa26.16■■□□□ 1.78
SFN-201ENST00000339276 COL17A1Q9UMD9 1497 aaPredicted RBP26.15■■□□□ 1.78
SFN-201ENST00000339276 ITSN2Q9NZM3 1697 aa26.14■■□□□ 1.78
SFN-201ENST00000339276 AKNAQ7Z591 1439 aa26.13■■□□□ 1.77
SFN-201ENST00000339276 PHLDB1Q86UU1 1377 aa26.12■■□□□ 1.77
SFN-201ENST00000339276 EFCAB2Q5VUJ9 269 aa26.12■■□□□ 1.77
SFN-201ENST00000339276 ADGRL1O94910 1474 aa26.08■■□□□ 1.76
SFN-201ENST00000339276 SAMD9LQ8IVG5 1584 aa26.06■■□□□ 1.76
SFN-201ENST00000339276 CFDP1Q9UEE9 299 aaPredicted RBP26.06■■□□□ 1.76
SFN-201ENST00000339276 ABCC1P33527 1531 aa26.04■■□□□ 1.76
SFN-201ENST00000339276 FRMPD1Q5SYB0 1578 aa26.03■■□□□ 1.76
SFN-201ENST00000339276 PPARGC1BQ86YN6 1023 aaKnown RBP26.03■■□□□ 1.76
SFN-201ENST00000339276 ZNF777Q9ULD5 760 aaPredicted RBP26.03■■□□□ 1.76
SFN-201ENST00000339276 SCAPERQ9BY12 1400 aa26.03■■□□□ 1.76
SFN-201ENST00000339276 MYOM3Q5VTT5 1437 aa26.02■■□□□ 1.76
SFN-201ENST00000339276 DENND4BO75064 1496 aaPredicted RBP26.02■■□□□ 1.76
SFN-201ENST00000339276 RICTORQ6R327 1708 aa26.02■■□□□ 1.76
SFN-201ENST00000339276 RAPGEF3O95398 923 aa26■■□□□ 1.75
SFN-201ENST00000339276 ARHGEF12Q9NZN5 1544 aa25.99■■□□□ 1.75
SFN-201ENST00000339276 SYCP2Q9BX26 1530 aa25.98■■□□□ 1.75
SFN-201ENST00000339276 POGZQ7Z3K3 1410 aa25.98■■□□□ 1.75
SFN-201ENST00000339276 ZNF644Q9H582 1327 aaPredicted RBP25.96■■□□□ 1.75
SFN-201ENST00000339276 CAMSAP2Q08AD1 1489 aa25.95■■□□□ 1.75
SFN-201ENST00000339276 PLEKHH2Q8IVE3 1493 aa25.94■■□□□ 1.74
SFN-201ENST00000339276 MIA2Q96PC5 1412 aa25.93■■□□□ 1.74
SFN-201ENST00000339276 TRAPPC8Q9Y2L5 1435 aa25.92■■□□□ 1.74
SFN-201ENST00000339276 KIAA1107Q9UPP5 1409 aa25.92■■□□□ 1.74
SFN-201ENST00000339276 ZNF518AQ6AHZ1 1483 aa25.91■■□□□ 1.74
SFN-201ENST00000339276 FGD6Q6ZV73 1430 aa25.91■■□□□ 1.74
SFN-201ENST00000339276 ZMYM4Q5VZL5 1548 aa25.91■■□□□ 1.74
SFN-201ENST00000339276 HNRNPMP52272 730 aaKnown RBP eCLIP25.89■■□□□ 1.74
SFN-201ENST00000339276 KDM5CP41229 1560 aa25.89■■□□□ 1.74
SFN-201ENST00000339276 PTPN23Q9H3S7 1636 aa25.89■■□□□ 1.73
SFN-201ENST00000339276 AFAP1Q8N556 730 aa25.88■■□□□ 1.73
SFN-201ENST00000339276 MBD5Q9P267 1494 aa25.87■■□□□ 1.73
SFN-201ENST00000339276 HECW2Q9P2P5 1572 aa25.83■■□□□ 1.73
SFN-201ENST00000339276 TCOF1Q13428 1488 aaKnown RBP25.83■■□□□ 1.73
SFN-201ENST00000339276 ARHGEF40Q8TER5 1519 aa25.83■■□□□ 1.72
SFN-201ENST00000339276 ZFYVE16Q7Z3T8 1539 aa25.82■■□□□ 1.72
SFN-201ENST00000339276 ARHGEF5Q12774 1597 aa25.82■■□□□ 1.72
SFN-201ENST00000339276 YEATS2Q9ULM3 1422 aa25.8■■□□□ 1.72
SFN-201ENST00000339276 CCDC141Q6ZP82 1450 aa25.8■■□□□ 1.72
SFN-201ENST00000339276 MAGI2Q86UL8 1455 aa25.8■■□□□ 1.72
SFN-201ENST00000339276 MLH3Q9UHC1 1453 aa25.78■■□□□ 1.72
SFN-201ENST00000339276 INO80Q9ULG1 1556 aaPredicted RBP25.77■■□□□ 1.72
SFN-201ENST00000339276 KIDINS220Q9ULH0 1771 aa25.77■■□□□ 1.72
SFN-201ENST00000339276 ABCA6Q8N139 1617 aa25.75■■□□□ 1.71
SFN-201ENST00000339276 ATP7AQ04656 1500 aa25.74■■□□□ 1.71
SFN-201ENST00000339276 SPAG9O60271 1321 aaKnown RBP25.74■■□□□ 1.71
SFN-201ENST00000339276 MYT1LQ9UL68 1186 aa25.74■■□□□ 1.71
SFN-201ENST00000339276 DIP2CQ9Y2E4 1556 aa25.73■■□□□ 1.71
SFN-201ENST00000339276 DNMT1P26358 1616 aaKnown RBP25.72■■□□□ 1.71
SFN-201ENST00000339276 FAM50AQ14320 339 aaKnown RBP25.72■■□□□ 1.71
SFN-201ENST00000339276 RSPH4AQ5TD94 716 aa25.72■■□□□ 1.71
SFN-201ENST00000339276 CROCC2H7BZ55 1655 aa25.71■■□□□ 1.71
SFN-201ENST00000339276 ABCC5O15440 1437 aa25.69■■□□□ 1.7
SFN-201ENST00000339276 DAPK1P53355 1430 aa25.68■■□□□ 1.7
SFN-201ENST00000339276 SIGLEC1Q9BZZ2 1709 aa25.68■■□□□ 1.7
SFN-201ENST00000339276 MAST1Q9Y2H9 1570 aa25.68■■□□□ 1.7
SFN-201ENST00000339276 RRBP1Q9P2E9 1410 aaKnown RBP25.67■■□□□ 1.7
SFN-201ENST00000339276 ATP10AO60312 1499 aa25.67■■□□□ 1.7
SFN-201ENST00000339276 RTEL1-TNFRSF6BF6WH68 1400 aa25.67■■□□□ 1.7
SFN-201ENST00000339276 TSPY4P0CV99 314 aa25.65■■□□□ 1.7
SFN-201ENST00000339276 TSPY10P0CW01 314 aa25.65■■□□□ 1.7
SFN-201ENST00000339276 C9orf84Q5VXU9 1444 aa25.65■■□□□ 1.7
SFN-201ENST00000339276 SHANK2Q9UPX8 1470 aa25.64■■□□□ 1.7
SFN-201ENST00000339276 ADGBQ8N7X0 1667 aa25.62■■□□□ 1.69
SFN-201ENST00000339276 REREQ9P2R6 1566 aa25.62■■□□□ 1.69
SFN-201ENST00000339276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.62■■□□□ 1.69
SFN-201ENST00000339276 PLXNC1O60486 1568 aa25.58■■□□□ 1.69
SFN-201ENST00000339276 A2MP01023 1474 aa25.57■■□□□ 1.68
SFN-201ENST00000339276 PTPRKQ15262 1439 aa25.56■■□□□ 1.68
SFN-201ENST00000339276 ARID4BQ4LE39 1312 aaPredicted RBP25.56■■□□□ 1.68
SFN-201ENST00000339276 CHIC2Q9UKJ5 165 aa25.55■■□□□ 1.68
SFN-201ENST00000339276 ITGAEP38570 1179 aa25.53■■□□□ 1.68
SFN-201ENST00000339276 BCORL1Q5H9F3 1711 aa25.53■■□□□ 1.68
SFN-201ENST00000339276 AGLP35573 1532 aa25.52■■□□□ 1.68
SFN-201ENST00000339276 ADGRL2O95490 1459 aa25.51■■□□□ 1.67
SFN-201ENST00000339276 DHX29Q7Z478 1369 aaKnown RBP25.49■■□□□ 1.67
SFN-201ENST00000339276 KIF15Q9NS87 1388 aa25.49■■□□□ 1.67
SFN-201ENST00000339276 ANKRD30AQ9BXX3 1397 aa25.48■■□□□ 1.67
SFN-201ENST00000339276 NCOA1Q15788 1441 aa25.48■■□□□ 1.67
SFN-201ENST00000339276 RRP7BPQ9NSQ0 103 aa25.47■■□□□ 1.67
SFN-201ENST00000339276 DUOX2Q9NRD8 1548 aa25.46■■□□□ 1.67
SFN-201ENST00000339276 ADAMTSL3P82987 1691 aa25.46■■□□□ 1.67
SFN-201ENST00000339276 MLECQ14165 292 aa25.45■■□□□ 1.66
SFN-201ENST00000339276 KDM4FA0A1W2PPD8 638 aa25.44■■□□□ 1.66
SFN-201ENST00000339276 ROCK1Q13464 1354 aa25.42■■□□□ 1.66
SFN-201ENST00000339276 MADDQ8WXG6 1647 aa25.42■■□□□ 1.66
SFN-201ENST00000339276 EIF2AK4Q9P2K8 1649 aaKnown RBP25.41■■□□□ 1.66
SFN-201ENST00000339276 ERBINQ96RT1 1412 aa25.39■■□□□ 1.66
SFN-201ENST00000339276 FER1L4A9Z1Z3 1794 aa25.39■■□□□ 1.65
SFN-201ENST00000339276 KIF3BO15066 747 aa25.37■■□□□ 1.65
SFN-201ENST00000339276 RIMS1Q86UR5 1692 aaKnown RBP25.35■■□□□ 1.65
SFN-201ENST00000339276 RNF17Q9BXT8 1623 aaKnown RBP25.35■■□□□ 1.65
SFN-201ENST00000339276 GGT6Q6P531 493 aa25.34■■□□□ 1.65
SFN-201ENST00000339276 ANKRD50Q9ULJ7 1429 aa25.33■■□□□ 1.65
SFN-201ENST00000339276 MROH1Q8NDA8 1641 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms