RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 L1TD1Q5T7N2 865 aaKnown RBP14.99□□□□□ -0.01
SHANK2-201ENST00000338508 NOP58Q9Y2X3 529 aaKnown RBP14.98□□□□□ -0.01
SHANK2-201ENST00000338508 KIAA1211Q6ZU35 1233 aa14.98□□□□□ -0.01
SHANK2-201ENST00000338508 KRI1Q8N9T8 703 aaKnown RBP14.97□□□□□ -0.01
SHANK2-201ENST00000338508 CFDP1Q9UEE9 299 aaPredicted RBP14.97□□□□□ -0.01
SHANK2-201ENST00000338508 GORABQ5T7V8 394 aa14.96□□□□□ -0.02
SHANK2-201ENST00000338508 RASSF8Q8NHQ8 419 aa14.95□□□□□ -0.02
SHANK2-201ENST00000338508 CHMP4BQ9H444 224 aaKnown RBP14.95□□□□□ -0.02
SHANK2-201ENST00000338508 TAF7LQ5H9L4 462 aa14.94□□□□□ -0.02
SHANK2-201ENST00000338508 NOL8Q76FK4 1167 aaKnown RBP14.92□□□□□ -0.02
SHANK2-201ENST00000338508 MS4A1P11836 297 aa14.91□□□□□ -0.02
SHANK2-201ENST00000338508 MORC1Q86VD1 984 aa14.9□□□□□ -0.02
SHANK2-201ENST00000338508 ZCCHC6Q5VYS8 1495 aaKnown RBP14.89□□□□□ -0.03
SHANK2-201ENST00000338508 DCAF11Q8TEB1 546 aa14.89□□□□□ -0.03
SHANK2-201ENST00000338508 FRAT2O75474 233 aaPredicted RBP14.88□□□□□ -0.03
SHANK2-201ENST00000338508 SIN3AQ96ST3 1273 aa14.88□□□□□ -0.03
SHANK2-201ENST00000338508 TOMM22Q9NS69 142 aa14.88□□□□□ -0.03
SHANK2-201ENST00000338508 FOXD4L1Q9NU39 408 aa14.88□□□□□ -0.03
SHANK2-201ENST00000338508 PPP4R2Q9NY27 417 aa14.88□□□□□ -0.03
SHANK2-201ENST00000338508 TRIM6-TRIM34B2RNG4 842 aa14.88□□□□□ -0.03
SHANK2-201ENST00000338508 PES1O00541 588 aaKnown RBP14.88□□□□□ -0.03
SHANK2-201ENST00000338508 TNNT3P45378 269 aaPredicted RBP14.87□□□□□ -0.03
SHANK2-201ENST00000338508 MARCH6O60337 910 aa14.87□□□□□ -0.03
SHANK2-201ENST00000338508 PATL2C9JE40 543 aaKnown RBP14.86□□□□□ -0.03
SHANK2-201ENST00000338508 CEP89Q96ST8 783 aa14.86□□□□□ -0.03
SHANK2-201ENST00000338508 SLKQ9H2G2 1235 aaPredicted RBP14.86□□□□□ -0.03
SHANK2-201ENST00000338508 FOXD4L5Q5VV16 416 aaPredicted RBP14.85□□□□□ -0.03
SHANK2-201ENST00000338508 FOXD4L4Q8WXT5 416 aaPredicted RBP14.85□□□□□ -0.03
SHANK2-201ENST00000338508 ITPRIPQ8IWB1 547 aa14.85□□□□□ -0.03
SHANK2-201ENST00000338508 RAD21O60216 631 aa14.85□□□□□ -0.03
SHANK2-201ENST00000338508 MSH5O43196 834 aa14.84□□□□□ -0.03
SHANK2-201ENST00000338508 TMF1P82094 1093 aa14.83□□□□□ -0.03
SHANK2-201ENST00000338508 GGT6Q6P531 493 aa14.83□□□□□ -0.03
SHANK2-201ENST00000338508 CNKSR2Q8WXI2 1034 aa14.83□□□□□ -0.04
SHANK2-201ENST00000338508 GTF2E1P29083 439 aaPredicted RBP14.83□□□□□ -0.04
SHANK2-201ENST00000338508 SLC4A10Q6U841 1118 aa14.83□□□□□ -0.04
SHANK2-201ENST00000338508 GOLGA6L1Q8N7Z2 621 aa14.83□□□□□ -0.04
SHANK2-201ENST00000338508 TPM4P67936 248 aa14.82□□□□□ -0.04
SHANK2-201ENST00000338508 RSF1Q96T23 1441 aaPredicted RBP14.82□□□□□ -0.04
SHANK2-201ENST00000338508 LTV1Q96GA3 475 aaPredicted RBP14.81□□□□□ -0.04
SHANK2-201ENST00000338508 CLIP1P30622 1438 aa14.81□□□□□ -0.04
SHANK2-201ENST00000338508 NUTM2FA1L443 756 aa14.8□□□□□ -0.04
SHANK2-201ENST00000338508 DEKP35659 375 aaKnown RBP14.8□□□□□ -0.04
SHANK2-201ENST00000338508 HDGFP51858 240 aaKnown RBP14.8□□□□□ -0.04
SHANK2-201ENST00000338508 MFAP1P55081 439 aaKnown RBP14.78□□□□□ -0.04
SHANK2-201ENST00000338508 U2AF1L5P0DN76 240 aaPredicted RBP14.78□□□□□ -0.04
SHANK2-201ENST00000338508 U2AF1Q01081 240 aaKnown RBP eCLIP14.78□□□□□ -0.04
SHANK2-201ENST00000338508 HDGFL2Q7Z4V5 671 aaPredicted RBP14.77□□□□□ -0.05
SHANK2-201ENST00000338508 NUTM2DQ5VT03 806 aaPredicted RBP14.77□□□□□ -0.05
SHANK2-201ENST00000338508 FOXD4L6Q3SYB3 417 aaPredicted RBP14.77□□□□□ -0.05
SHANK2-201ENST00000338508 FOXD4L3Q6VB84 417 aaPredicted RBP14.77□□□□□ -0.05
SHANK2-201ENST00000338508 GPATCH3Q96I76 525 aa14.76□□□□□ -0.05
SHANK2-201ENST00000338508 ERCC6Q03468 1493 aa14.76□□□□□ -0.05
SHANK2-201ENST00000338508 KLHL34Q8N239 644 aa14.76□□□□□ -0.05
SHANK2-201ENST00000338508 GBP4Q96PP9 640 aa14.76□□□□□ -0.05
SHANK2-201ENST00000338508 HTATSF1O43719 755 aaKnown RBP14.75□□□□□ -0.05
SHANK2-201ENST00000338508 KANK1Q14678 1352 aa14.75□□□□□ -0.05
SHANK2-201ENST00000338508 CCAR2Q8N163 923 aaKnown RBP14.75□□□□□ -0.05
SHANK2-201ENST00000338508 TPD52L1Q16890 204 aaPredicted RBP14.75□□□□□ -0.05
SHANK2-201ENST00000338508 SAMD1Q6SPF0 538 aaPredicted RBP14.74□□□□□ -0.05
SHANK2-201ENST00000338508 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.74□□□□□ -0.05
SHANK2-201ENST00000338508 IPO8O15397 1037 aaKnown RBP14.73□□□□□ -0.05
SHANK2-201ENST00000338508 TCEAL9Q9UHQ7 104 aa14.73□□□□□ -0.05
SHANK2-201ENST00000338508 FBXW7Q969H0 707 aa14.73□□□□□ -0.05
SHANK2-201ENST00000338508 TPM3P06753 285 aa14.72□□□□□ -0.05
SHANK2-201ENST00000338508 SF3A1Q15459 793 aaKnown RBP14.72□□□□□ -0.05
SHANK2-201ENST00000338508 STK31Q9BXU1 1019 aa14.72□□□□□ -0.05
SHANK2-201ENST00000338508 NGEFQ8N5V2 710 aa14.72□□□□□ -0.05
SHANK2-201ENST00000338508 FOXD1Q16676 465 aa14.71□□□□□ -0.05
SHANK2-201ENST00000338508 SYAP1Q96A49 352 aaPredicted RBP14.71□□□□□ -0.05
SHANK2-201ENST00000338508 CCDC34Q96HJ3 373 aa14.7□□□□□ -0.06
SHANK2-201ENST00000338508 SPAG9O60271 1321 aaKnown RBP14.7□□□□□ -0.06
SHANK2-201ENST00000338508 CLUAP1Q96AJ1 413 aa14.69□□□□□ -0.06
SHANK2-201ENST00000338508 CTDP1Q9Y5B0 961 aaPredicted RBP14.69□□□□□ -0.06
SHANK2-201ENST00000338508 CCDC146Q8IYE0 955 aa14.69□□□□□ -0.06
SHANK2-201ENST00000338508 EIF4G1Q04637 1599 aaKnown RBP14.69□□□□□ -0.06
SHANK2-201ENST00000338508 CFAP44Q96MT7 982 aa14.68□□□□□ -0.06
SHANK2-201ENST00000338508 SMC4Q9NTJ3 1288 aa14.68□□□□□ -0.06
SHANK2-201ENST00000338508 TRIM34Q9BYJ4 488 aa14.67□□□□□ -0.06
SHANK2-201ENST00000338508 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.67□□□□□ -0.06
SHANK2-201ENST00000338508 NGDNQ8NEJ9 315 aaKnown RBP14.66□□□□□ -0.06
SHANK2-201ENST00000338508 CWC22Q9HCG8 908 aaKnown RBP14.66□□□□□ -0.06
SHANK2-201ENST00000338508 H3BQV1 296 aa14.66□□□□□ -0.06
SHANK2-201ENST00000338508 IFFO2Q5TF58 517 aa14.66□□□□□ -0.06
SHANK2-201ENST00000338508 AMPHP49418 695 aa14.65□□□□□ -0.06
SHANK2-201ENST00000338508 RILPL2Q969X0 211 aa14.65□□□□□ -0.06
SHANK2-201ENST00000338508 PCMTD1Q96MG8 357 aaPredicted RBP14.65□□□□□ -0.06
SHANK2-201ENST00000338508 CALD1Q05682 793 aaKnown RBP14.65□□□□□ -0.06
SHANK2-201ENST00000338508 EVA1CP58658 441 aa14.65□□□□□ -0.06
SHANK2-201ENST00000338508 RWDD1Q9H446 243 aaPredicted RBP14.65□□□□□ -0.06
SHANK2-201ENST00000338508 PHF23Q9BUL5 403 aaPredicted RBP14.65□□□□□ -0.06
SHANK2-201ENST00000338508 DCAF1Q9Y4B6 1507 aa14.64□□□□□ -0.07
SHANK2-201ENST00000338508 TSR1Q2NL82 804 aaKnown RBP14.64□□□□□ -0.07
SHANK2-201ENST00000338508 KIF16BQ96L93 1317 aa14.64□□□□□ -0.07
SHANK2-201ENST00000338508 MCTP1Q6DN14 999 aa14.63□□□□□ -0.07
SHANK2-201ENST00000338508 AKAP17AQ02040 695 aaKnown RBP14.63□□□□□ -0.07
SHANK2-201ENST00000338508 SYTL4Q96C24 671 aaPredicted RBP14.62□□□□□ -0.07
SHANK2-201ENST00000338508 BCL11BQ9C0K0 894 aaPredicted RBP14.62□□□□□ -0.07
SHANK2-201ENST00000338508 CCNB3Q8WWL7 1395 aa14.62□□□□□ -0.07
SHANK2-201ENST00000338508 DHX16O60231 1041 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms