RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CAMSAP2Q08AD1 1489 aa22.15■■□□□ 1.14
CDK5RAP3-201ENST00000338399 PTPRKQ15262 1439 aa22.13■■□□□ 1.13
CDK5RAP3-201ENST00000338399 ARHGAP5Q13017 1502 aa22.09■■□□□ 1.13
CDK5RAP3-201ENST00000338399 DNMT1P26358 1616 aaKnown RBP22.09■■□□□ 1.13
CDK5RAP3-201ENST00000338399 ABCA9Q8IUA7 1624 aa22.08■■□□□ 1.12
CDK5RAP3-201ENST00000338399 PLCH2O75038 1416 aa22.07■■□□□ 1.12
CDK5RAP3-201ENST00000338399 DAPK1P53355 1430 aa22.07■■□□□ 1.12
CDK5RAP3-201ENST00000338399 MAPKBP1O60336 1514 aa22.06■■□□□ 1.12
CDK5RAP3-201ENST00000338399 SAMD9LQ8IVG5 1584 aa22.06■■□□□ 1.12
CDK5RAP3-201ENST00000338399 ABCC5O15440 1437 aa22.06■■□□□ 1.12
CDK5RAP3-201ENST00000338399 CHIC2Q9UKJ5 165 aa22.05■■□□□ 1.12
CDK5RAP3-201ENST00000338399 SETD5Q9C0A6 1442 aa22.04■■□□□ 1.12
CDK5RAP3-201ENST00000338399 CCER1Q8TC90 406 aaPredicted RBP22.01■■□□□ 1.11
CDK5RAP3-201ENST00000338399 RAB3GAP2Q9H2M9 1393 aa22.01■■□□□ 1.11
CDK5RAP3-201ENST00000338399 HNRNPMP52272 730 aaKnown RBP eCLIP22■■□□□ 1.114e-8■■□□□ 12.7
CDK5RAP3-201ENST00000338399 EFCAB2Q5VUJ9 269 aa22■■□□□ 1.11
CDK5RAP3-201ENST00000338399 ARAP3Q8WWN8 1544 aa22■■□□□ 1.11
CDK5RAP3-201ENST00000338399 CROCC2H7BZ55 1655 aa21.99■■□□□ 1.11
CDK5RAP3-201ENST00000338399 HFM1A2PYH4 1435 aa21.98■■□□□ 1.11
CDK5RAP3-201ENST00000338399 RRP7BPQ9NSQ0 103 aa21.98■■□□□ 1.11
CDK5RAP3-201ENST00000338399 MBD5Q9P267 1494 aa21.97■■□□□ 1.11
CDK5RAP3-201ENST00000338399 ARHGEF5Q12774 1597 aa21.97■■□□□ 1.11
CDK5RAP3-201ENST00000338399 SYCP2Q9BX26 1530 aa21.97■■□□□ 1.11
CDK5RAP3-201ENST00000338399 HRCP23327 699 aa21.96■■□□□ 1.11
CDK5RAP3-201ENST00000338399 NAIPQ13075 1403 aa21.96■■□□□ 1.11
CDK5RAP3-201ENST00000338399 AKNAQ7Z591 1439 aa21.96■■□□□ 1.11
CDK5RAP3-201ENST00000338399 PLEKHH2Q8IVE3 1493 aa21.95■■□□□ 1.11
CDK5RAP3-201ENST00000338399 CD109Q6YHK3 1445 aa21.94■■□□□ 1.1
CDK5RAP3-201ENST00000338399 ROCK1Q13464 1354 aa21.94■■□□□ 1.1
CDK5RAP3-201ENST00000338399 FANCAO15360 1455 aa21.94■■□□□ 1.1
CDK5RAP3-201ENST00000338399 ADGBQ8N7X0 1667 aa21.94■■□□□ 1.1
CDK5RAP3-201ENST00000338399 KIAA1107Q9UPP5 1409 aa21.93■■□□□ 1.1
CDK5RAP3-201ENST00000338399 GCC2Q8IWJ2 1684 aa21.93■■□□□ 1.1
CDK5RAP3-201ENST00000338399 CCDC141Q6ZP82 1450 aa21.92■■□□□ 1.1
CDK5RAP3-201ENST00000338399 ABCC1P33527 1531 aa21.92■■□□□ 1.1
CDK5RAP3-201ENST00000338399 ARHGEF12Q9NZN5 1544 aa21.92■■□□□ 1.1
CDK5RAP3-201ENST00000338399 RSPH4AQ5TD94 716 aa21.92■■□□□ 1.1
CDK5RAP3-201ENST00000338399 TSPY4P0CV99 314 aa21.91■■□□□ 1.1
CDK5RAP3-201ENST00000338399 TSPY10P0CW01 314 aa21.91■■□□□ 1.1
CDK5RAP3-201ENST00000338399 SHANK2Q9UPX8 1470 aa21.91■■□□□ 1.1
CDK5RAP3-201ENST00000338399 C9orf84Q5VXU9 1444 aa21.89■■□□□ 1.09
CDK5RAP3-201ENST00000338399 ADGRL2O95490 1459 aa21.89■■□□□ 1.09
CDK5RAP3-201ENST00000338399 GLI2P10070 1586 aa21.89■■□□□ 1.09
CDK5RAP3-201ENST00000338399 NCOA1Q15788 1441 aa21.88■■□□□ 1.09
CDK5RAP3-201ENST00000338399 DIP2BQ9P265 1576 aa21.88■■□□□ 1.09
CDK5RAP3-201ENST00000338399 DHX57Q6P158 1386 aaKnown RBP21.87■■□□□ 1.09
CDK5RAP3-201ENST00000338399 MAP3K4Q9Y6R4 1608 aa21.86■■□□□ 1.09
CDK5RAP3-201ENST00000338399 ANKRD30AQ9BXX3 1397 aa21.86■■□□□ 1.09
CDK5RAP3-201ENST00000338399 FAM69CQ0P6D2 419 aa21.86■■□□□ 1.09
CDK5RAP3-201ENST00000338399 KDM6BO15054 1643 aa21.85■■□□□ 1.09
CDK5RAP3-201ENST00000338399 TRAPPC8Q9Y2L5 1435 aa21.84■■□□□ 1.09
CDK5RAP3-201ENST00000338399 CFAP74Q9C0B2 1584 aa21.84■■□□□ 1.09
CDK5RAP3-201ENST00000338399 ADGRL1O94910 1474 aa21.84■■□□□ 1.09
CDK5RAP3-201ENST00000338399 MAST1Q9Y2H9 1570 aa21.83■■□□□ 1.08
CDK5RAP3-201ENST00000338399 SCAPERQ9BY12 1400 aa21.82■■□□□ 1.08
CDK5RAP3-201ENST00000338399 ZEB1P37275 1124 aaPredicted RBP21.81■■□□□ 1.08
CDK5RAP3-201ENST00000338399 DNAJC5Q9H3Z4 198 aa21.81■■□□□ 1.08
CDK5RAP3-201ENST00000338399 AFAP1Q8N556 730 aa21.79■■□□□ 1.08
CDK5RAP3-201ENST00000338399 KIF13AQ9H1H9 1805 aa21.77■■□□□ 1.08
CDK5RAP3-201ENST00000338399 TSPOAP1O95153 1857 aa21.77■■□□□ 1.08
CDK5RAP3-201ENST00000338399 KIF15Q9NS87 1388 aa21.77■■□□□ 1.07
CDK5RAP3-201ENST00000338399 NEO1Q92859 1461 aa21.77■■□□□ 1.07
CDK5RAP3-201ENST00000338399 ANKRD50Q9ULJ7 1429 aa21.75■■□□□ 1.07
CDK5RAP3-201ENST00000338399 SPAG9O60271 1321 aaKnown RBP21.74■■□□□ 1.07
CDK5RAP3-201ENST00000338399 TRIM52Q96A61 297 aa21.74■■□□□ 1.07
CDK5RAP3-201ENST00000338399 PLXNC1O60486 1568 aa21.74■■□□□ 1.07
CDK5RAP3-201ENST00000338399 PPRC1Q5VV67 1664 aaKnown RBP21.72■■□□□ 1.07
CDK5RAP3-201ENST00000338399 CLSPNQ9HAW4 1339 aa21.71■■□□□ 1.07
CDK5RAP3-201ENST00000338399 RTEL1-TNFRSF6BF6WH68 1400 aa21.71■■□□□ 1.07
CDK5RAP3-201ENST00000338399 ZNF518AQ6AHZ1 1483 aa21.7■■□□□ 1.06
CDK5RAP3-201ENST00000338399 ZFYVE16Q7Z3T8 1539 aa21.7■■□□□ 1.06
CDK5RAP3-201ENST00000338399 POGZQ7Z3K3 1410 aa21.68■■□□□ 1.06
CDK5RAP3-201ENST00000338399 INO80Q9ULG1 1556 aaPredicted RBP21.68■■□□□ 1.06
CDK5RAP3-201ENST00000338399 ACIN1Q9UKV3 1341 aaKnown RBP21.68■■□□□ 1.06
CDK5RAP3-201ENST00000338399 ATP7AQ04656 1500 aa21.68■■□□□ 1.06
CDK5RAP3-201ENST00000338399 MYT1LQ9UL68 1186 aa21.67■■□□□ 1.06
CDK5RAP3-201ENST00000338399 DUOX2Q9NRD8 1548 aa21.66■■□□□ 1.06
CDK5RAP3-201ENST00000338399 DENND4BO75064 1496 aaPredicted RBP21.66■■□□□ 1.06
CDK5RAP3-201ENST00000338399 TEX14Q8IWB6 1497 aa21.65■■□□□ 1.06
CDK5RAP3-201ENST00000338399 KDM5CP41229 1560 aa21.65■■□□□ 1.06
CDK5RAP3-201ENST00000338399 KIDINS220Q9ULH0 1771 aa21.64■■□□□ 1.05
CDK5RAP3-201ENST00000338399 RAPGEF3O95398 923 aa21.64■■□□□ 1.05
CDK5RAP3-201ENST00000338399 MPHOSPH9Q99550 1183 aa21.62■■□□□ 1.05
CDK5RAP3-201ENST00000338399 RICTORQ6R327 1708 aa21.62■■□□□ 1.05
CDK5RAP3-201ENST00000338399 ERBINQ96RT1 1412 aa21.6■■□□□ 1.05
CDK5RAP3-201ENST00000338399 HECW2Q9P2P5 1572 aa21.6■■□□□ 1.05
CDK5RAP3-201ENST00000338399 MLH3Q9UHC1 1453 aa21.59■■□□□ 1.05
CDK5RAP3-201ENST00000338399 PZPP20742 1482 aa21.58■■□□□ 1.04
CDK5RAP3-201ENST00000338399 SLC4A1APQ9BWU0 796 aaKnown RBP21.58■■□□□ 1.04
CDK5RAP3-201ENST00000338399 NUP155O75694 1391 aa21.57■■□□□ 1.04
CDK5RAP3-201ENST00000338399 FRMPD1Q5SYB0 1578 aa21.56■■□□□ 1.04
CDK5RAP3-201ENST00000338399 UNC13BO14795 1591 aa21.55■■□□□ 1.04
CDK5RAP3-201ENST00000338399 SIN3AQ96ST3 1273 aa21.54■■□□□ 1.04
CDK5RAP3-201ENST00000338399 KDM5DQ9BY66 1539 aa21.54■■□□□ 1.04
CDK5RAP3-201ENST00000338399 DHX29Q7Z478 1369 aaKnown RBP21.53■■□□□ 1.04
CDK5RAP3-201ENST00000338399 TRHP20396 242 aaPredicted RBP21.53■■□□□ 1.04
CDK5RAP3-201ENST00000338399 ABCA6Q8N139 1617 aa21.52■■□□□ 1.04
CDK5RAP3-201ENST00000338399 FOXD1Q16676 465 aa21.52■■□□□ 1.04
CDK5RAP3-201ENST00000338399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.52■■□□□ 1.032e-7■■□□□ 13.2
CDK5RAP3-201ENST00000338399 NEUROD1Q13562 356 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms