RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 YEATS2Q9ULM3 1422 aa27.98■■■□□ 2.07
VSTM1-201ENST00000338372 POGZQ7Z3K3 1410 aa27.96■■■□□ 2.07
VSTM1-201ENST00000338372 MAGI2Q86UL8 1455 aa27.95■■■□□ 2.07
VSTM1-201ENST00000338372 MADDQ8WXG6 1647 aa27.95■■■□□ 2.06
VSTM1-201ENST00000338372 CDC42BPBQ9Y5S2 1711 aa27.95■■■□□ 2.06
VSTM1-201ENST00000338372 ZFYVE16Q7Z3T8 1539 aa27.93■■■□□ 2.06
VSTM1-201ENST00000338372 EFCAB2Q5VUJ9 269 aa27.92■■■□□ 2.06
VSTM1-201ENST00000338372 CCDC18Q5T9S5 1454 aa27.89■■■□□ 2.06
VSTM1-201ENST00000338372 CLIP1P30622 1438 aa27.87■■■□□ 2.05
VSTM1-201ENST00000338372 FYCO1Q9BQS8 1478 aa27.87■■■□□ 2.05
VSTM1-201ENST00000338372 ARID4BQ4LE39 1312 aaPredicted RBP27.85■■■□□ 2.05
VSTM1-201ENST00000338372 KDM5CP41229 1560 aa27.85■■■□□ 2.05
VSTM1-201ENST00000338372 PREX2Q70Z35 1606 aa27.84■■■□□ 2.05
VSTM1-201ENST00000338372 RIMS1Q86UR5 1692 aaKnown RBP27.84■■■□□ 2.05
VSTM1-201ENST00000338372 ARHGAP5Q13017 1502 aa27.83■■■□□ 2.05
VSTM1-201ENST00000338372 CDC42BPAQ5VT25 1732 aa27.82■■■□□ 2.04
VSTM1-201ENST00000338372 ARHGEF12Q9NZN5 1544 aa27.81■■■□□ 2.04
VSTM1-201ENST00000338372 ATP10AO60312 1499 aa27.8■■■□□ 2.04
VSTM1-201ENST00000338372 ZNF518AQ6AHZ1 1483 aa27.79■■■□□ 2.04
VSTM1-201ENST00000338372 AFAP1Q8N556 730 aa27.79■■■□□ 2.04
VSTM1-201ENST00000338372 ABCC1P33527 1531 aa27.76■■■□□ 2.03
VSTM1-201ENST00000338372 ITSN2Q9NZM3 1697 aa27.74■■■□□ 2.03
VSTM1-201ENST00000338372 C9orf84Q5VXU9 1444 aa27.74■■■□□ 2.03
VSTM1-201ENST00000338372 TRAPPC8Q9Y2L5 1435 aa27.73■■■□□ 2.03
VSTM1-201ENST00000338372 LMTK3Q96Q04 1460 aa27.72■■■□□ 2.03
VSTM1-201ENST00000338372 FER1L4A9Z1Z3 1794 aa27.72■■■□□ 2.03
VSTM1-201ENST00000338372 DIP2CQ9Y2E4 1556 aa27.72■■■□□ 2.03
VSTM1-201ENST00000338372 MLH3Q9UHC1 1453 aa27.71■■■□□ 2.03
VSTM1-201ENST00000338372 REREQ9P2R6 1566 aa27.69■■■□□ 2.02
VSTM1-201ENST00000338372 GPATCH8Q9UKJ3 1502 aaKnown RBP27.69■■■□□ 2.02
VSTM1-201ENST00000338372 ABCA6Q8N139 1617 aa27.69■■■□□ 2.02
VSTM1-201ENST00000338372 KIDINS220Q9ULH0 1771 aa27.66■■■□□ 2.02
VSTM1-201ENST00000338372 SAMD9LQ8IVG5 1584 aa27.66■■■□□ 2.02
VSTM1-201ENST00000338372 MLECQ14165 292 aa27.65■■■□□ 2.02
VSTM1-201ENST00000338372 ILDR1Q86SU0 546 aaPredicted RBP27.65■■■□□ 2.02
VSTM1-201ENST00000338372 CEP162Q5TB80 1403 aa27.61■■■□□ 2.01
VSTM1-201ENST00000338372 AGLP35573 1532 aa27.59■■■□□ 2.01
VSTM1-201ENST00000338372 SYCP2Q9BX26 1530 aa27.56■■■□□ 2
VSTM1-201ENST00000338372 KIAA1107Q9UPP5 1409 aa27.53■■■□□ 2
VSTM1-201ENST00000338372 TIAM1Q13009 1591 aa27.52■■■□□ 2
VSTM1-201ENST00000338372 HNRNPMP52272 730 aaKnown RBP eCLIP27.51■■□□□ 1.99
VSTM1-201ENST00000338372 MTUS2Q5JR59 1369 aa27.5■■□□□ 1.99
VSTM1-201ENST00000338372 CEBPAP49715 358 aaPredicted RBP27.5■■□□□ 1.99
VSTM1-201ENST00000338372 HSPA2P54652 639 aa27.5■■□□□ 1.99
VSTM1-201ENST00000338372 ZNF777Q9ULD5 760 aaPredicted RBP27.5■■□□□ 1.99
VSTM1-201ENST00000338372 PLPPR3Q6T4P5 718 aa27.49■■□□□ 1.99
VSTM1-201ENST00000338372 EHBP1L1Q8N3D4 1523 aa27.49■■□□□ 1.99
VSTM1-201ENST00000338372 CCNB3Q8WWL7 1395 aa27.48■■□□□ 1.99
VSTM1-201ENST00000338372 SETD1BQ9UPS6 1966 aaKnown RBP27.48■■□□□ 1.99
VSTM1-201ENST00000338372 CFDP1Q9UEE9 299 aaPredicted RBP27.47■■□□□ 1.99
VSTM1-201ENST00000338372 INO80Q9ULG1 1556 aaPredicted RBP27.47■■□□□ 1.99
VSTM1-201ENST00000338372 PREX1Q8TCU6 1659 aa27.46■■□□□ 1.99
VSTM1-201ENST00000338372 LOC105371045A0A1W2PR82 267 aa27.46■■□□□ 1.99
VSTM1-201ENST00000338372 MYT1LQ9UL68 1186 aa27.46■■□□□ 1.99
VSTM1-201ENST00000338372 C3P01024 1663 aa27.46■■□□□ 1.99
VSTM1-201ENST00000338372 PLEKHH2Q8IVE3 1493 aa27.44■■□□□ 1.98
VSTM1-201ENST00000338372 MBD5Q9P267 1494 aa27.44■■□□□ 1.98
VSTM1-201ENST00000338372 ZNF644Q9H582 1327 aaPredicted RBP27.43■■□□□ 1.98
VSTM1-201ENST00000338372 ATP7AQ04656 1500 aa27.42■■□□□ 1.98
VSTM1-201ENST00000338372 SPAG9O60271 1321 aaKnown RBP27.41■■□□□ 1.98
VSTM1-201ENST00000338372 PLXNC1O60486 1568 aa27.41■■□□□ 1.98
VSTM1-201ENST00000338372 SUPT6HQ7KZ85 1726 aaKnown RBP27.38■■□□□ 1.97
VSTM1-201ENST00000338372 STRCQ7RTU9 1775 aa27.37■■□□□ 1.97
VSTM1-201ENST00000338372 NCOA2Q15596 1464 aa27.35■■□□□ 1.97
VSTM1-201ENST00000338372 VPS8Q8N3P4 1428 aa27.33■■□□□ 1.97
VSTM1-201ENST00000338372 MROH2AA6NES4 1674 aa27.33■■□□□ 1.97
VSTM1-201ENST00000338372 A2MP01023 1474 aa27.32■■□□□ 1.96
VSTM1-201ENST00000338372 ADGBQ8N7X0 1667 aa27.31■■□□□ 1.96
VSTM1-201ENST00000338372 CNTLNQ9NXG0 1405 aa27.31■■□□□ 1.96
VSTM1-201ENST00000338372 RTEL1-TNFRSF6BF6WH68 1400 aa27.29■■□□□ 1.96
VSTM1-201ENST00000338372 UHRF1BP1Q6BDS2 1440 aa27.27■■□□□ 1.96
VSTM1-201ENST00000338372 FBXO41Q8TF61 875 aa27.27■■□□□ 1.96
VSTM1-201ENST00000338372 LRRC9Q6ZRR7 1453 aa27.26■■□□□ 1.95
VSTM1-201ENST00000338372 CAMSAP2Q08AD1 1489 aa27.25■■□□□ 1.95
VSTM1-201ENST00000338372 ZMYM3Q14202 1370 aa27.24■■□□□ 1.95
VSTM1-201ENST00000338372 CLTCQ00610 1675 aaKnown RBP27.24■■□□□ 1.95
VSTM1-201ENST00000338372 MAP3K1Q13233 1512 aa27.24■■□□□ 1.95
VSTM1-201ENST00000338372 KANK4Q5T7N3 995 aaPredicted RBP27.21■■□□□ 1.95
VSTM1-201ENST00000338372 NPATQ14207 1427 aa27.21■■□□□ 1.95
VSTM1-201ENST00000338372 ESF1Q9H501 851 aaKnown RBP27.2■■□□□ 1.94
VSTM1-201ENST00000338372 DHX29Q7Z478 1369 aaKnown RBP27.2■■□□□ 1.94
VSTM1-201ENST00000338372 CCDC141Q6ZP82 1450 aa27.19■■□□□ 1.94
VSTM1-201ENST00000338372 ARHGEF5Q12774 1597 aa27.19■■□□□ 1.94
VSTM1-201ENST00000338372 RSPH4AQ5TD94 716 aa27.15■■□□□ 1.94
VSTM1-201ENST00000338372 PPP6R1Q9UPN7 881 aa27.15■■□□□ 1.94
VSTM1-201ENST00000338372 PTPRKQ15262 1439 aa27.15■■□□□ 1.94
VSTM1-201ENST00000338372 GGT6Q6P531 493 aa27.14■■□□□ 1.94
VSTM1-201ENST00000338372 PTPRTO14522 1441 aa27.11■■□□□ 1.93
VSTM1-201ENST00000338372 NCOA1Q15788 1441 aa27.1■■□□□ 1.93
VSTM1-201ENST00000338372 CERKQ8TCT0 537 aa27.1■■□□□ 1.93
VSTM1-201ENST00000338372 ZNF142P52746 1687 aaPredicted RBP27.1■■□□□ 1.93
VSTM1-201ENST00000338372 DMRT2Q9Y5R5 561 aa27.08■■□□□ 1.93
VSTM1-201ENST00000338372 MAST1Q9Y2H9 1570 aa27.08■■□□□ 1.93
VSTM1-201ENST00000338372 MYO3AQ8NEV4 1616 aa27.08■■□□□ 1.93
VSTM1-201ENST00000338372 CAMSAP1Q5T5Y3 1602 aa27.05■■□□□ 1.92
VSTM1-201ENST00000338372 MYOM3Q5VTT5 1437 aa27.05■■□□□ 1.92
VSTM1-201ENST00000338372 MIA2Q96PC5 1412 aa27.05■■□□□ 1.92
VSTM1-201ENST00000338372 KIF3BO15066 747 aa27.03■■□□□ 1.92
VSTM1-201ENST00000338372 CEP170BQ9Y4F5 1589 aaPredicted RBP27.01■■□□□ 1.92
VSTM1-201ENST00000338372 FAM135AQ9P2D6 1515 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms