RNA–Protein interactions for RNA: ENST00000337604.6

MUC1-201, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MUC1, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-201ENST00000337604 ARID4BQ4LE39 1312 aaPredicted RBP26.31■■□□□ 1.8
MUC1-201ENST00000337604 SCAPERQ9BY12 1400 aa26.31■■□□□ 1.8
MUC1-201ENST00000337604 PCF11O94913 1555 aaKnown RBP26.3■■□□□ 1.8
MUC1-201ENST00000337604 MAGI2Q86UL8 1455 aa26.28■■□□□ 1.8
MUC1-201ENST00000337604 RIMS1Q86UR5 1692 aaKnown RBP26.28■■□□□ 1.8
MUC1-201ENST00000337604 CDK11AQ9UQ88 783 aaPredicted RBP26.25■■□□□ 1.79
MUC1-201ENST00000337604 CASKIN1Q8WXD9 1431 aa26.23■■□□□ 1.79
MUC1-201ENST00000337604 ILDR1Q86SU0 546 aaPredicted RBP26.23■■□□□ 1.79
MUC1-201ENST00000337604 CLIP1P30622 1438 aa26.22■■□□□ 1.79
MUC1-201ENST00000337604 ARHGAP5Q13017 1502 aa26.2■■□□□ 1.79
MUC1-201ENST00000337604 EFCAB2Q5VUJ9 269 aa26.2■■□□□ 1.78
MUC1-201ENST00000337604 CCDC18Q5T9S5 1454 aa26.19■■□□□ 1.78
MUC1-201ENST00000337604 LMTK3Q96Q04 1460 aa26.18■■□□□ 1.78
MUC1-201ENST00000337604 KDM5CP41229 1560 aa26.18■■□□□ 1.78
MUC1-201ENST00000337604 CDC42BPBQ9Y5S2 1711 aa26.18■■□□□ 1.78
MUC1-201ENST00000337604 PREX2Q70Z35 1606 aa26.16■■□□□ 1.78
MUC1-201ENST00000337604 ZNF518AQ6AHZ1 1483 aa26.16■■□□□ 1.78
MUC1-201ENST00000337604 FYCO1Q9BQS8 1478 aa26.15■■□□□ 1.78
MUC1-201ENST00000337604 ATP10AO60312 1499 aa26.14■■□□□ 1.78
MUC1-201ENST00000337604 C9orf84Q5VXU9 1444 aa26.14■■□□□ 1.77
MUC1-201ENST00000337604 FER1L4A9Z1Z3 1794 aa26.13■■□□□ 1.77
MUC1-201ENST00000337604 ARHGEF12Q9NZN5 1544 aa26.11■■□□□ 1.77
MUC1-201ENST00000337604 ABCC1P33527 1531 aa26.1■■□□□ 1.77
MUC1-201ENST00000337604 DIP2CQ9Y2E4 1556 aa26.08■■□□□ 1.77
MUC1-201ENST00000337604 MLECQ14165 292 aa26.08■■□□□ 1.77
MUC1-201ENST00000337604 AFAP1Q8N556 730 aa26.08■■□□□ 1.77
MUC1-201ENST00000337604 CDC42BPAQ5VT25 1732 aa26.08■■□□□ 1.76
MUC1-201ENST00000337604 ABCA6Q8N139 1617 aa26.06■■□□□ 1.76
MUC1-201ENST00000337604 ITSN2Q9NZM3 1697 aa26.06■■□□□ 1.76
MUC1-201ENST00000337604 TRAPPC8Q9Y2L5 1435 aa26.05■■□□□ 1.76
MUC1-201ENST00000337604 MLH3Q9UHC1 1453 aa26.02■■□□□ 1.76
MUC1-201ENST00000337604 REREQ9P2R6 1566 aa26.02■■□□□ 1.76
MUC1-201ENST00000337604 PLPPR3Q6T4P5 718 aa26.01■■□□□ 1.75
MUC1-201ENST00000337604 HSPA2P54652 639 aa25.97■■□□□ 1.75
MUC1-201ENST00000337604 SAMD9LQ8IVG5 1584 aa25.97■■□□□ 1.75
MUC1-201ENST00000337604 KIDINS220Q9ULH0 1771 aa25.96■■□□□ 1.75
MUC1-201ENST00000337604 GPATCH8Q9UKJ3 1502 aaKnown RBP25.95■■□□□ 1.74
MUC1-201ENST00000337604 SYCP2Q9BX26 1530 aa25.93■■□□□ 1.74
MUC1-201ENST00000337604 AGLP35573 1532 aa25.92■■□□□ 1.74
MUC1-201ENST00000337604 MYT1LQ9UL68 1186 aa25.91■■□□□ 1.74
MUC1-201ENST00000337604 PREX1Q8TCU6 1659 aa25.9■■□□□ 1.74
MUC1-201ENST00000337604 CEBPAP49715 358 aaPredicted RBP25.89■■□□□ 1.74
MUC1-201ENST00000337604 ZNF777Q9ULD5 760 aaPredicted RBP25.85■■□□□ 1.73
MUC1-201ENST00000337604 CEP162Q5TB80 1403 aa25.84■■□□□ 1.73
MUC1-201ENST00000337604 C3P01024 1663 aa25.83■■□□□ 1.73
MUC1-201ENST00000337604 MTUS2Q5JR59 1369 aa25.82■■□□□ 1.72
MUC1-201ENST00000337604 TIAM1Q13009 1591 aa25.82■■□□□ 1.72
MUC1-201ENST00000337604 FBXO41Q8TF61 875 aa25.82■■□□□ 1.72
MUC1-201ENST00000337604 INO80Q9ULG1 1556 aaPredicted RBP25.82■■□□□ 1.72
MUC1-201ENST00000337604 EHBP1L1Q8N3D4 1523 aa25.81■■□□□ 1.72
MUC1-201ENST00000337604 CCNB3Q8WWL7 1395 aa25.81■■□□□ 1.72
MUC1-201ENST00000337604 KIAA1107Q9UPP5 1409 aa25.8■■□□□ 1.72
MUC1-201ENST00000337604 ATP7AQ04656 1500 aa25.79■■□□□ 1.72
MUC1-201ENST00000337604 HNRNPMP52272 730 aaKnown RBP eCLIP25.79■■□□□ 1.72
MUC1-201ENST00000337604 PLEKHH2Q8IVE3 1493 aa25.79■■□□□ 1.72
MUC1-201ENST00000337604 CFDP1Q9UEE9 299 aaPredicted RBP25.77■■□□□ 1.72
MUC1-201ENST00000337604 PLXNC1O60486 1568 aa25.77■■□□□ 1.72
MUC1-201ENST00000337604 SETD1BQ9UPS6 1966 aaKnown RBP25.76■■□□□ 1.72
MUC1-201ENST00000337604 SPAG9O60271 1321 aaKnown RBP25.76■■□□□ 1.71
MUC1-201ENST00000337604 UHRF1BP1Q6BDS2 1440 aa25.76■■□□□ 1.71
MUC1-201ENST00000337604 STRCQ7RTU9 1775 aa25.74■■□□□ 1.71
MUC1-201ENST00000337604 SUPT6HQ7KZ85 1726 aaKnown RBP25.74■■□□□ 1.71
MUC1-201ENST00000337604 CNTLNQ9NXG0 1405 aa25.71■■□□□ 1.71
MUC1-201ENST00000337604 MROH2AA6NES4 1674 aa25.71■■□□□ 1.71
MUC1-201ENST00000337604 ZNF644Q9H582 1327 aaPredicted RBP25.7■■□□□ 1.71
MUC1-201ENST00000337604 A2MP01023 1474 aa25.69■■□□□ 1.7
MUC1-201ENST00000337604 MBD5Q9P267 1494 aa25.69■■□□□ 1.7
MUC1-201ENST00000337604 ESF1Q9H501 851 aaKnown RBP25.66■■□□□ 1.7
MUC1-201ENST00000337604 ADGBQ8N7X0 1667 aa25.64■■□□□ 1.7
MUC1-201ENST00000337604 NCOA2Q15596 1464 aa25.64■■□□□ 1.69
MUC1-201ENST00000337604 CLTCQ00610 1675 aaKnown RBP25.63■■□□□ 1.69
MUC1-201ENST00000337604 NPATQ14207 1427 aa25.62■■□□□ 1.69
MUC1-201ENST00000337604 CERKQ8TCT0 537 aa25.6■■□□□ 1.69
MUC1-201ENST00000337604 ZMYM3Q14202 1370 aa25.59■■□□□ 1.69
MUC1-201ENST00000337604 CAMSAP2Q08AD1 1489 aa25.59■■□□□ 1.69
MUC1-201ENST00000337604 RTEL1-TNFRSF6BF6WH68 1400 aa25.57■■□□□ 1.68
MUC1-201ENST00000337604 VPS8Q8N3P4 1428 aa25.57■■□□□ 1.68
MUC1-201ENST00000337604 NCOA1Q15788 1441 aa25.55■■□□□ 1.68
MUC1-201ENST00000337604 CCDC141Q6ZP82 1450 aa25.55■■□□□ 1.68
MUC1-201ENST00000337604 LOC105371045A0A1W2PR82 267 aa25.55■■□□□ 1.68
MUC1-201ENST00000337604 MYO3AQ8NEV4 1616 aa25.54■■□□□ 1.68
MUC1-201ENST00000337604 PTPRTO14522 1441 aa25.54■■□□□ 1.68
MUC1-201ENST00000337604 ZNF142P52746 1687 aaPredicted RBP25.53■■□□□ 1.68
MUC1-201ENST00000337604 DMRT2Q9Y5R5 561 aa25.53■■□□□ 1.68
MUC1-201ENST00000337604 PTPRKQ15262 1439 aa25.53■■□□□ 1.68
MUC1-201ENST00000337604 GGT6Q6P531 493 aa25.52■■□□□ 1.68
MUC1-201ENST00000337604 LRRC9Q6ZRR7 1453 aa25.52■■□□□ 1.68
MUC1-201ENST00000337604 CAMSAP1Q5T5Y3 1602 aa25.51■■□□□ 1.67
MUC1-201ENST00000337604 DHX29Q7Z478 1369 aaKnown RBP25.5■■□□□ 1.67
MUC1-201ENST00000337604 ARHGEF5Q12774 1597 aa25.48■■□□□ 1.67
MUC1-201ENST00000337604 CEP170BQ9Y4F5 1589 aaPredicted RBP25.47■■□□□ 1.67
MUC1-201ENST00000337604 LTBP4Q8N2S1 1624 aa25.45■■□□□ 1.67
MUC1-201ENST00000337604 PPP6R1Q9UPN7 881 aa25.44■■□□□ 1.66
MUC1-201ENST00000337604 MAP3K1Q13233 1512 aa25.42■■□□□ 1.66
MUC1-201ENST00000337604 KDM5DQ9BY66 1539 aa25.41■■□□□ 1.66
MUC1-201ENST00000337604 PLA2R1Q13018 1463 aa25.4■■□□□ 1.66
MUC1-201ENST00000337604 KANK4Q5T7N3 995 aaPredicted RBP25.4■■□□□ 1.66
MUC1-201ENST00000337604 FAM135AQ9P2D6 1515 aa25.4■■□□□ 1.66
MUC1-201ENST00000337604 KIF3BO15066 747 aa25.39■■□□□ 1.66
MUC1-201ENST00000337604 RSPH4AQ5TD94 716 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms