RNA–Protein interactions for RNA: ENST00000337019.7

PACRG-201, Transcript of parkin coregulated, humanhuman

TSL 2 BASIC

Gene PACRG, Length 1,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-201ENST00000337019 FRMPD1Q5SYB0 1578 aa13.22□□□□□ -0.29
PACRG-201ENST00000337019 POGZQ7Z3K3 1410 aa13.22□□□□□ -0.29
PACRG-201ENST00000337019 PREX2Q70Z35 1606 aa13.22□□□□□ -0.29
PACRG-201ENST00000337019 CCNB3Q8WWL7 1395 aa13.21□□□□□ -0.29
PACRG-201ENST00000337019 ARHGEF40Q8TER5 1519 aa13.21□□□□□ -0.3
PACRG-201ENST00000337019 MYT1LQ9UL68 1186 aa13.21□□□□□ -0.3
PACRG-201ENST00000337019 RICTORQ6R327 1708 aa13.2□□□□□ -0.3
PACRG-201ENST00000337019 ZMYM4Q5VZL5 1548 aa13.2□□□□□ -0.3
PACRG-201ENST00000337019 ZNF518AQ6AHZ1 1483 aa13.2□□□□□ -0.3
PACRG-201ENST00000337019 ARID4BQ4LE39 1312 aaPredicted RBP13.2□□□□□ -0.3
PACRG-201ENST00000337019 ZFYVE16Q7Z3T8 1539 aa13.19□□□□□ -0.3
PACRG-201ENST00000337019 MAGI2Q86UL8 1455 aa13.19□□□□□ -0.3
PACRG-201ENST00000337019 KDM4FA0A1W2PPD8 638 aa13.19□□□□□ -0.3
PACRG-201ENST00000337019 APLP2Q06481 763 aa13.19□□□□□ -0.3
PACRG-201ENST00000337019 ZNF777Q9ULD5 760 aaPredicted RBP13.18□□□□□ -0.3
PACRG-201ENST00000337019 TIAM1Q13009 1591 aa13.17□□□□□ -0.3
PACRG-201ENST00000337019 CFDP1Q9UEE9 299 aaPredicted RBP13.17□□□□□ -0.3
PACRG-201ENST00000337019 ABCC1P33527 1531 aa13.16□□□□□ -0.3
PACRG-201ENST00000337019 CDC42BPBQ9Y5S2 1711 aa13.15□□□□□ -0.3
PACRG-201ENST00000337019 PLEKHH2Q8IVE3 1493 aa13.15□□□□□ -0.3
PACRG-201ENST00000337019 CDC42BPAQ5VT25 1732 aa13.15□□□□□ -0.3
PACRG-201ENST00000337019 GPATCH8Q9UKJ3 1502 aaKnown RBP13.15□□□□□ -0.3
PACRG-201ENST00000337019 ITSN2Q9NZM3 1697 aa13.14□□□□□ -0.31
PACRG-201ENST00000337019 SUPT6HQ7KZ85 1726 aaKnown RBP13.14□□□□□ -0.31
PACRG-201ENST00000337019 YEATS2Q9ULM3 1422 aa13.13□□□□□ -0.31
PACRG-201ENST00000337019 KDM5CP41229 1560 aa13.12□□□□□ -0.31
PACRG-201ENST00000337019 HECW2Q9P2P5 1572 aa13.12□□□□□ -0.31
PACRG-201ENST00000337019 C9orf84Q5VXU9 1444 aa13.12□□□□□ -0.31
PACRG-201ENST00000337019 HRCP23327 699 aa13.12□□□□□ -0.31
PACRG-201ENST00000337019 NCOA2Q15596 1464 aa13.12□□□□□ -0.31
PACRG-201ENST00000337019 MAP3K1Q13233 1512 aa13.11□□□□□ -0.31
PACRG-201ENST00000337019 SYCP2Q9BX26 1530 aa13.11□□□□□ -0.31
PACRG-201ENST00000337019 AFAP1Q8N556 730 aa13.11□□□□□ -0.31
PACRG-201ENST00000337019 LRRC9Q6ZRR7 1453 aa13.11□□□□□ -0.31
PACRG-201ENST00000337019 SAMD9LQ8IVG5 1584 aa13.1□□□□□ -0.31
PACRG-201ENST00000337019 ATP10AO60312 1499 aa13.1□□□□□ -0.31
PACRG-201ENST00000337019 KIAA1107Q9UPP5 1409 aa13.09□□□□□ -0.31
PACRG-201ENST00000337019 TRAPPC8Q9Y2L5 1435 aa13.09□□□□□ -0.31
PACRG-201ENST00000337019 MLH3Q9UHC1 1453 aa13.08□□□□□ -0.32
PACRG-201ENST00000337019 SPAG9O60271 1321 aaKnown RBP13.08□□□□□ -0.32
PACRG-201ENST00000337019 ARHGEF12Q9NZN5 1544 aa13.07□□□□□ -0.32
PACRG-201ENST00000337019 HNRNPMP52272 730 aaKnown RBP eCLIP13.07□□□□□ -0.32
PACRG-201ENST00000337019 BCORL1Q5H9F3 1711 aa13.07□□□□□ -0.32
PACRG-201ENST00000337019 MLECQ14165 292 aa13.06□□□□□ -0.32
PACRG-201ENST00000337019 DIP2CQ9Y2E4 1556 aa13.05□□□□□ -0.32
PACRG-201ENST00000337019 ADAMTSL3P82987 1691 aa13.04□□□□□ -0.32
PACRG-201ENST00000337019 ABCA6Q8N139 1617 aa13.04□□□□□ -0.32
PACRG-201ENST00000337019 MADDQ8WXG6 1647 aa13.04□□□□□ -0.32
PACRG-201ENST00000337019 CAMSAP2Q08AD1 1489 aa13.04□□□□□ -0.32
PACRG-201ENST00000337019 PTPRMP28827 1452 aa13.03□□□□□ -0.32
PACRG-201ENST00000337019 ATP7AQ04656 1500 aa13.03□□□□□ -0.32
PACRG-201ENST00000337019 REREQ9P2R6 1566 aa13.03□□□□□ -0.32
PACRG-201ENST00000337019 KANK4Q5T7N3 995 aaPredicted RBP13.02□□□□□ -0.32
PACRG-201ENST00000337019 ESF1Q9H501 851 aaKnown RBP13.02□□□□□ -0.32
PACRG-201ENST00000337019 ZNF644Q9H582 1327 aaPredicted RBP13.02□□□□□ -0.33
PACRG-201ENST00000337019 MYOM3Q5VTT5 1437 aa13.02□□□□□ -0.33
PACRG-201ENST00000337019 CCDC141Q6ZP82 1450 aa13.02□□□□□ -0.33
PACRG-201ENST00000337019 RSPH4AQ5TD94 716 aa13.01□□□□□ -0.33
PACRG-201ENST00000337019 KIDINS220Q9ULH0 1771 aa13□□□□□ -0.33
PACRG-201ENST00000337019 RIMS1Q86UR5 1692 aaKnown RBP13□□□□□ -0.33
PACRG-201ENST00000337019 INO80Q9ULG1 1556 aaPredicted RBP13□□□□□ -0.33
PACRG-201ENST00000337019 MIA2Q96PC5 1412 aa12.99□□□□□ -0.33
PACRG-201ENST00000337019 PLPPR3Q6T4P5 718 aa12.99□□□□□ -0.33
PACRG-201ENST00000337019 AGLP35573 1532 aa12.99□□□□□ -0.33
PACRG-201ENST00000337019 MBD5Q9P267 1494 aa12.98□□□□□ -0.33
PACRG-201ENST00000337019 FER1L4A9Z1Z3 1794 aa12.98□□□□□ -0.33
PACRG-201ENST00000337019 TSPY4P0CV99 314 aa12.98□□□□□ -0.33
PACRG-201ENST00000337019 TSPY10P0CW01 314 aa12.98□□□□□ -0.33
PACRG-201ENST00000337019 RTEL1-TNFRSF6BF6WH68 1400 aa12.97□□□□□ -0.33
PACRG-201ENST00000337019 SIGLEC1Q9BZZ2 1709 aa12.97□□□□□ -0.33
PACRG-201ENST00000337019 A2MP01023 1474 aa12.97□□□□□ -0.33
PACRG-201ENST00000337019 ARHGEF5Q12774 1597 aa12.96□□□□□ -0.33
PACRG-201ENST00000337019 CNTLNQ9NXG0 1405 aa12.95□□□□□ -0.34
PACRG-201ENST00000337019 ADGBQ8N7X0 1667 aa12.94□□□□□ -0.34
PACRG-201ENST00000337019 PLXNC1O60486 1568 aa12.93□□□□□ -0.34
PACRG-201ENST00000337019 FGD6Q6ZV73 1430 aa12.92□□□□□ -0.34
PACRG-201ENST00000337019 PTPN23Q9H3S7 1636 aa12.92□□□□□ -0.34
PACRG-201ENST00000337019 DHX29Q7Z478 1369 aaKnown RBP12.91□□□□□ -0.34
PACRG-201ENST00000337019 GGT6Q6P531 493 aa12.9□□□□□ -0.34
PACRG-201ENST00000337019 PCGF6Q9BYE7 350 aa12.9□□□□□ -0.34
PACRG-201ENST00000337019 MAST1Q9Y2H9 1570 aa12.89□□□□□ -0.35
PACRG-201ENST00000337019 SHANK2Q9UPX8 1470 aa12.88□□□□□ -0.35
PACRG-201ENST00000337019 KIF3BO15066 747 aa12.88□□□□□ -0.35
PACRG-201ENST00000337019 FAM50AQ14320 339 aaKnown RBP12.88□□□□□ -0.35
PACRG-201ENST00000337019 PPP6R1Q9UPN7 881 aa12.88□□□□□ -0.35
PACRG-201ENST00000337019 TCOF1Q13428 1488 aaKnown RBP12.87□□□□□ -0.35
PACRG-201ENST00000337019 CEBPAP49715 358 aaPredicted RBP12.87□□□□□ -0.35
PACRG-201ENST00000337019 ILDR1Q86SU0 546 aaPredicted RBP12.87□□□□□ -0.35
PACRG-201ENST00000337019 DAPK1P53355 1430 aa12.86□□□□□ -0.35
PACRG-201ENST00000337019 UHRF1BP1Q6BDS2 1440 aa12.86□□□□□ -0.35
PACRG-201ENST00000337019 DNMT1P26358 1616 aaKnown RBP12.85□□□□□ -0.35
PACRG-201ENST00000337019 LMTK3Q96Q04 1460 aa12.85□□□□□ -0.35
PACRG-201ENST00000337019 FAM135AQ9P2D6 1515 aa12.84□□□□□ -0.35
PACRG-201ENST00000337019 KIF15Q9NS87 1388 aa12.84□□□□□ -0.35
PACRG-201ENST00000337019 MROH2AA6NES4 1674 aa12.84□□□□□ -0.35
PACRG-201ENST00000337019 CROCC2H7BZ55 1655 aa12.84□□□□□ -0.35
PACRG-201ENST00000337019 ABCC5O15440 1437 aa12.84□□□□□ -0.35
PACRG-201ENST00000337019 ANKRD30AQ9BXX3 1397 aa12.83□□□□□ -0.35
PACRG-201ENST00000337019 DUOX2Q9NRD8 1548 aa12.83□□□□□ -0.36
PACRG-201ENST00000337019 C3P01024 1663 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms