RNA–Protein interactions for RNA: ENST00000335658.6

DPPA4-201, Transcript of developmental pluripotency associated 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DPPA4, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DPPA4-201ENST00000335658 KCNH8Q96L42 1107 aa11.05□□□□□ -0.64
DPPA4-201ENST00000335658 TEX14Q8IWB6 1497 aa11.05□□□□□ -0.64
DPPA4-201ENST00000335658 CDC42BPBQ9Y5S2 1711 aa11.05□□□□□ -0.64
DPPA4-201ENST00000335658 GPATCH8Q9UKJ3 1502 aaKnown RBP11.04□□□□□ -0.64
DPPA4-201ENST00000335658 NEO1Q92859 1461 aa11.04□□□□□ -0.64
DPPA4-201ENST00000335658 CCNB3Q8WWL7 1395 aa11.03□□□□□ -0.64
DPPA4-201ENST00000335658 MIA2Q96PC5 1412 aa11.03□□□□□ -0.64
DPPA4-201ENST00000335658 MYOM3Q5VTT5 1437 aa11.02□□□□□ -0.65
DPPA4-201ENST00000335658 TSPOAP1O95153 1857 aa11□□□□□ -0.65
DPPA4-201ENST00000335658 PLEKHH2Q8IVE3 1493 aa11□□□□□ -0.65
DPPA4-201ENST00000335658 ARHGAP5Q13017 1502 aa11□□□□□ -0.65
DPPA4-201ENST00000335658 FANCAO15360 1455 aa10.99□□□□□ -0.65
DPPA4-201ENST00000335658 TCOF1Q13428 1488 aaKnown RBP10.99□□□□□ -0.65
DPPA4-201ENST00000335658 EFCAB2Q5VUJ9 269 aa10.99□□□□□ -0.65
DPPA4-201ENST00000335658 TRHP20396 242 aaPredicted RBP10.99□□□□□ -0.65
DPPA4-201ENST00000335658 KIAA1107Q9UPP5 1409 aa10.98□□□□□ -0.65
DPPA4-201ENST00000335658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.98□□□□□ -0.65
DPPA4-201ENST00000335658 SAMD9LQ8IVG5 1584 aa10.98□□□□□ -0.65
DPPA4-201ENST00000335658 ABCC1P33527 1531 aa10.97□□□□□ -0.65
DPPA4-201ENST00000335658 FGD6Q6ZV73 1430 aa10.97□□□□□ -0.65
DPPA4-201ENST00000335658 AKNAQ7Z591 1439 aa10.97□□□□□ -0.65
DPPA4-201ENST00000335658 PTPN23Q9H3S7 1636 aa10.96□□□□□ -0.65
DPPA4-201ENST00000335658 CFDP1Q9UEE9 299 aaPredicted RBP10.96□□□□□ -0.66
DPPA4-201ENST00000335658 ARHGEF5Q12774 1597 aa10.96□□□□□ -0.66
DPPA4-201ENST00000335658 RRBP1Q9P2E9 1410 aaKnown RBP10.95□□□□□ -0.66
DPPA4-201ENST00000335658 CAMSAP2Q08AD1 1489 aa10.94□□□□□ -0.66
DPPA4-201ENST00000335658 ZEB1P37275 1124 aaPredicted RBP10.94□□□□□ -0.66
DPPA4-201ENST00000335658 AEBP2Q6ZN18 517 aaPredicted RBP10.94□□□□□ -0.66
DPPA4-201ENST00000335658 ADGRL1O94910 1474 aa10.94□□□□□ -0.66
DPPA4-201ENST00000335658 RICTORQ6R327 1708 aa10.93□□□□□ -0.66
DPPA4-201ENST00000335658 RSPH4AQ5TD94 716 aa10.93□□□□□ -0.66
DPPA4-201ENST00000335658 ZMYM4Q5VZL5 1548 aa10.92□□□□□ -0.66
DPPA4-201ENST00000335658 DENND4BO75064 1496 aaPredicted RBP10.92□□□□□ -0.66
DPPA4-201ENST00000335658 MBD5Q9P267 1494 aa10.92□□□□□ -0.66
DPPA4-201ENST00000335658 CCER1Q8TC90 406 aaPredicted RBP10.92□□□□□ -0.66
DPPA4-201ENST00000335658 KDM5CP41229 1560 aa10.92□□□□□ -0.66
DPPA4-201ENST00000335658 ARHGEF12Q9NZN5 1544 aa10.91□□□□□ -0.66
DPPA4-201ENST00000335658 POGZQ7Z3K3 1410 aa10.91□□□□□ -0.66
DPPA4-201ENST00000335658 DNMT1P26358 1616 aaKnown RBP10.91□□□□□ -0.66
DPPA4-201ENST00000335658 FRMPD1Q5SYB0 1578 aa10.91□□□□□ -0.66
DPPA4-201ENST00000335658 MAST1Q9Y2H9 1570 aa10.91□□□□□ -0.66
DPPA4-201ENST00000335658 CROCC2H7BZ55 1655 aa10.91□□□□□ -0.66
DPPA4-201ENST00000335658 SCAPERQ9BY12 1400 aa10.91□□□□□ -0.66
DPPA4-201ENST00000335658 KDM6BO15054 1643 aa10.91□□□□□ -0.66
DPPA4-201ENST00000335658 SYCP2Q9BX26 1530 aa10.91□□□□□ -0.66
DPPA4-201ENST00000335658 ZNF518AQ6AHZ1 1483 aa10.9□□□□□ -0.66
DPPA4-201ENST00000335658 SHANK2Q9UPX8 1470 aa10.9□□□□□ -0.67
DPPA4-201ENST00000335658 CCDC141Q6ZP82 1450 aa10.89□□□□□ -0.67
DPPA4-201ENST00000335658 MAGI2Q86UL8 1455 aa10.89□□□□□ -0.67
DPPA4-201ENST00000335658 RTEL1-TNFRSF6BF6WH68 1400 aa10.88□□□□□ -0.67
DPPA4-201ENST00000335658 MLH3Q9UHC1 1453 aa10.88□□□□□ -0.67
DPPA4-201ENST00000335658 COL17A1Q9UMD9 1497 aaPredicted RBP10.88□□□□□ -0.67
DPPA4-201ENST00000335658 ZNF644Q9H582 1327 aaPredicted RBP10.87□□□□□ -0.67
DPPA4-201ENST00000335658 INO80Q9ULG1 1556 aaPredicted RBP10.87□□□□□ -0.67
DPPA4-201ENST00000335658 TRAPPC8Q9Y2L5 1435 aa10.87□□□□□ -0.67
DPPA4-201ENST00000335658 ZNF777Q9ULD5 760 aaPredicted RBP10.86□□□□□ -0.67
DPPA4-201ENST00000335658 DAPK1P53355 1430 aa10.86□□□□□ -0.67
DPPA4-201ENST00000335658 HECW2Q9P2P5 1572 aa10.86□□□□□ -0.67
DPPA4-201ENST00000335658 ABCC5O15440 1437 aa10.86□□□□□ -0.67
DPPA4-201ENST00000335658 ADGBQ8N7X0 1667 aa10.86□□□□□ -0.67
DPPA4-201ENST00000335658 SCAF1Q9H7N4 1312 aaKnown RBP10.85□□□□□ -0.67
DPPA4-201ENST00000335658 PLXNC1O60486 1568 aa10.85□□□□□ -0.67
DPPA4-201ENST00000335658 KIDINS220Q9ULH0 1771 aa10.84□□□□□ -0.67
DPPA4-201ENST00000335658 ADGRL2O95490 1459 aa10.84□□□□□ -0.67
DPPA4-201ENST00000335658 ZFYVE16Q7Z3T8 1539 aa10.84□□□□□ -0.67
DPPA4-201ENST00000335658 HNRNPMP52272 730 aaKnown RBP eCLIP10.84□□□□□ -0.67
DPPA4-201ENST00000335658 REREQ9P2R6 1566 aa10.84□□□□□ -0.67
DPPA4-201ENST00000335658 ATP7AQ04656 1500 aa10.83□□□□□ -0.68
DPPA4-201ENST00000335658 ARHGEF40Q8TER5 1519 aa10.83□□□□□ -0.68
DPPA4-201ENST00000335658 ROCK1Q13464 1354 aa10.83□□□□□ -0.68
DPPA4-201ENST00000335658 C9orf84Q5VXU9 1444 aa10.82□□□□□ -0.68
DPPA4-201ENST00000335658 FAM50AQ14320 339 aaKnown RBP10.81□□□□□ -0.68
DPPA4-201ENST00000335658 SPAG9O60271 1321 aaKnown RBP10.81□□□□□ -0.68
DPPA4-201ENST00000335658 RAPGEF3O95398 923 aa10.81□□□□□ -0.68
DPPA4-201ENST00000335658 TSPY4P0CV99 314 aa10.81□□□□□ -0.68
DPPA4-201ENST00000335658 TSPY10P0CW01 314 aa10.81□□□□□ -0.68
DPPA4-201ENST00000335658 AFAP1Q8N556 730 aa10.8□□□□□ -0.68
DPPA4-201ENST00000335658 DIP2CQ9Y2E4 1556 aa10.8□□□□□ -0.68
DPPA4-201ENST00000335658 BCORL1Q5H9F3 1711 aa10.8□□□□□ -0.68
DPPA4-201ENST00000335658 ABCA6Q8N139 1617 aa10.8□□□□□ -0.68
DPPA4-201ENST00000335658 ATP10AO60312 1499 aa10.79□□□□□ -0.68
DPPA4-201ENST00000335658 PTPRKQ15262 1439 aa10.79□□□□□ -0.68
DPPA4-201ENST00000335658 ANKRD30AQ9BXX3 1397 aa10.78□□□□□ -0.68
DPPA4-201ENST00000335658 AGLP35573 1532 aa10.78□□□□□ -0.68
DPPA4-201ENST00000335658 DUOX2Q9NRD8 1548 aa10.78□□□□□ -0.68
DPPA4-201ENST00000335658 EIF2AK4Q9P2K8 1649 aaKnown RBP10.78□□□□□ -0.68
DPPA4-201ENST00000335658 NCOA1Q15788 1441 aa10.78□□□□□ -0.68
DPPA4-201ENST00000335658 GCC2Q8IWJ2 1684 aa10.77□□□□□ -0.68
DPPA4-201ENST00000335658 YEATS2Q9ULM3 1422 aa10.76□□□□□ -0.69
DPPA4-201ENST00000335658 ERBINQ96RT1 1412 aa10.75□□□□□ -0.69
DPPA4-201ENST00000335658 A2MP01023 1474 aa10.75□□□□□ -0.69
DPPA4-201ENST00000335658 DHX29Q7Z478 1369 aaKnown RBP10.75□□□□□ -0.69
DPPA4-201ENST00000335658 ACIN1Q9UKV3 1341 aaKnown RBP10.74□□□□□ -0.69
DPPA4-201ENST00000335658 HFM1A2PYH4 1435 aa10.74□□□□□ -0.69
DPPA4-201ENST00000335658 FAM135AQ9P2D6 1515 aa10.74□□□□□ -0.69
DPPA4-201ENST00000335658 KIF15Q9NS87 1388 aa10.73□□□□□ -0.69
DPPA4-201ENST00000335658 RNF17Q9BXT8 1623 aaKnown RBP10.73□□□□□ -0.69
DPPA4-201ENST00000335658 DEPDC5O75140 1603 aa10.72□□□□□ -0.69
DPPA4-201ENST00000335658 NAIPQ13075 1403 aa10.71□□□□□ -0.69
DPPA4-201ENST00000335658 SIGLEC1Q9BZZ2 1709 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms