RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 SIGLEC1Q9BZZ2 1709 aa40.17■■■■■ 4.02
CDKN3-202ENST00000335183 KIF14Q15058 1648 aa40.16■■■■■ 4.02
CDKN3-202ENST00000335183 MAGI2Q86UL8 1455 aa40.15■■■■■ 4.02
CDKN3-202ENST00000335183 LRRIQ1Q96JM4 1722 aa40.14■■■■■ 4.02
CDKN3-202ENST00000335183 POGZQ7Z3K3 1410 aa40.14■■■■■ 4.02
CDKN3-202ENST00000335183 PCF11O94913 1555 aaKnown RBP40.1■■■■■ 4.01
CDKN3-202ENST00000335183 EFCAB2Q5VUJ9 269 aa40.08■■■■■ 4.01
CDKN3-202ENST00000335183 PLPPR3Q6T4P5 718 aa40.07■■■■■ 4.01
CDKN3-202ENST00000335183 TROQ12816 1431 aaPredicted RBP40.07■■■■■ 4
CDKN3-202ENST00000335183 CLIP1P30622 1438 aa40.04■■■■■ 4
CDKN3-202ENST00000335183 LMTK3Q96Q04 1460 aa40.04■■■■■ 4
CDKN3-202ENST00000335183 MLECQ14165 292 aa40.03■■■■■ 4
CDKN3-202ENST00000335183 FER1L4A9Z1Z3 1794 aa40.02■■■■■ 4
CDKN3-202ENST00000335183 ARHGAP5Q13017 1502 aa40.01■■■■■ 4
CDKN3-202ENST00000335183 ATP10AO60312 1499 aa39.95■■■■□ 3.99
CDKN3-202ENST00000335183 C9orf84Q5VXU9 1444 aa39.93■■■■□ 3.98
CDKN3-202ENST00000335183 CDC42BPBQ9Y5S2 1711 aa39.93■■■■□ 3.98
CDKN3-202ENST00000335183 ZNF518AQ6AHZ1 1483 aa39.92■■■■□ 3.98
CDKN3-202ENST00000335183 CASKIN1Q8WXD9 1431 aa39.88■■■■□ 3.97
CDKN3-202ENST00000335183 CCDC18Q5T9S5 1454 aa39.88■■■■□ 3.97
CDKN3-202ENST00000335183 KDM5CP41229 1560 aa39.86■■■■□ 3.97
CDKN3-202ENST00000335183 MYT1LQ9UL68 1186 aa39.86■■■■□ 3.97
CDKN3-202ENST00000335183 AFAP1Q8N556 730 aa39.85■■■■□ 3.97
CDKN3-202ENST00000335183 PREX2Q70Z35 1606 aa39.84■■■■□ 3.97
CDKN3-202ENST00000335183 HSPA2P54652 639 aa39.84■■■■□ 3.97
CDKN3-202ENST00000335183 ARHGEF12Q9NZN5 1544 aa39.84■■■■□ 3.97
CDKN3-202ENST00000335183 FBXO41Q8TF61 875 aa39.79■■■■□ 3.96
CDKN3-202ENST00000335183 DIP2CQ9Y2E4 1556 aa39.76■■■■□ 3.96
CDKN3-202ENST00000335183 CDC42BPAQ5VT25 1732 aa39.74■■■■□ 3.95
CDKN3-202ENST00000335183 ITSN2Q9NZM3 1697 aa39.74■■■■□ 3.95
CDKN3-202ENST00000335183 ABCC1P33527 1531 aa39.74■■■■□ 3.95
CDKN3-202ENST00000335183 FYCO1Q9BQS8 1478 aa39.73■■■■□ 3.95
CDKN3-202ENST00000335183 ABCA6Q8N139 1617 aa39.73■■■■□ 3.95
CDKN3-202ENST00000335183 PREX1Q8TCU6 1659 aa39.69■■■■□ 3.94
CDKN3-202ENST00000335183 TRAPPC8Q9Y2L5 1435 aa39.68■■■■□ 3.94
CDKN3-202ENST00000335183 MLH3Q9UHC1 1453 aa39.68■■■■□ 3.94
CDKN3-202ENST00000335183 CEBPAP49715 358 aaPredicted RBP39.67■■■■□ 3.94
CDKN3-202ENST00000335183 REREQ9P2R6 1566 aa39.67■■■■□ 3.94
CDKN3-202ENST00000335183 KIDINS220Q9ULH0 1771 aa39.59■■■■□ 3.93
CDKN3-202ENST00000335183 ZNF777Q9ULD5 760 aaPredicted RBP39.57■■■■□ 3.93
CDKN3-202ENST00000335183 SAMD9LQ8IVG5 1584 aa39.54■■■■□ 3.92
CDKN3-202ENST00000335183 AGLP35573 1532 aa39.53■■■■□ 3.92
CDKN3-202ENST00000335183 SETD1BQ9UPS6 1966 aaKnown RBP39.52■■■■□ 3.92
CDKN3-202ENST00000335183 C3P01024 1663 aa39.51■■■■□ 3.92
CDKN3-202ENST00000335183 SYCP2Q9BX26 1530 aa39.5■■■■□ 3.91
CDKN3-202ENST00000335183 GPATCH8Q9UKJ3 1502 aaKnown RBP39.49■■■■□ 3.91
CDKN3-202ENST00000335183 ESF1Q9H501 851 aaKnown RBP39.48■■■■□ 3.91
CDKN3-202ENST00000335183 UHRF1BP1Q6BDS2 1440 aa39.47■■■■□ 3.91
CDKN3-202ENST00000335183 STRCQ7RTU9 1775 aa39.41■■■■□ 3.9
CDKN3-202ENST00000335183 HNRNPMP52272 730 aaKnown RBP eCLIP39.4■■■■□ 3.9
CDKN3-202ENST00000335183 MTUS2Q5JR59 1369 aa39.38■■■■□ 3.89
CDKN3-202ENST00000335183 CCNB3Q8WWL7 1395 aa39.38■■■■□ 3.89
CDKN3-202ENST00000335183 SPAG9O60271 1321 aaKnown RBP39.38■■■■□ 3.89
CDKN3-202ENST00000335183 SUPT6HQ7KZ85 1726 aaKnown RBP39.37■■■■□ 3.89
CDKN3-202ENST00000335183 CERKQ8TCT0 537 aa39.37■■■■□ 3.89
CDKN3-202ENST00000335183 CFDP1Q9UEE9 299 aaPredicted RBP39.37■■■■□ 3.89
CDKN3-202ENST00000335183 PLEKHH2Q8IVE3 1493 aa39.33■■■■□ 3.89
CDKN3-202ENST00000335183 ATP7AQ04656 1500 aa39.33■■■■□ 3.89
CDKN3-202ENST00000335183 CNTLNQ9NXG0 1405 aa39.32■■■■□ 3.89
CDKN3-202ENST00000335183 KIAA1107Q9UPP5 1409 aa39.31■■■■□ 3.88
CDKN3-202ENST00000335183 INO80Q9ULG1 1556 aaPredicted RBP39.29■■■■□ 3.88
CDKN3-202ENST00000335183 DMRT2Q9Y5R5 561 aa39.29■■■■□ 3.88
CDKN3-202ENST00000335183 MROH2AA6NES4 1674 aa39.27■■■■□ 3.88
CDKN3-202ENST00000335183 EHBP1L1Q8N3D4 1523 aa39.24■■■■□ 3.87
CDKN3-202ENST00000335183 TIAM1Q13009 1591 aa39.24■■■■□ 3.87
CDKN3-202ENST00000335183 PLXNC1O60486 1568 aa39.21■■■■□ 3.87
CDKN3-202ENST00000335183 CLTCQ00610 1675 aaKnown RBP39.2■■■■□ 3.87
CDKN3-202ENST00000335183 A2MP01023 1474 aa39.2■■■■□ 3.87
CDKN3-202ENST00000335183 CEP162Q5TB80 1403 aa39.19■■■■□ 3.86
CDKN3-202ENST00000335183 ADGBQ8N7X0 1667 aa39.16■■■■□ 3.86
CDKN3-202ENST00000335183 ZNF644Q9H582 1327 aaPredicted RBP39.15■■■■□ 3.86
CDKN3-202ENST00000335183 ZMYM3Q14202 1370 aa39.15■■■■□ 3.86
CDKN3-202ENST00000335183 PTPRTO14522 1441 aa39.12■■■■□ 3.85
CDKN3-202ENST00000335183 NPATQ14207 1427 aa39.12■■■■□ 3.85
CDKN3-202ENST00000335183 GGT6Q6P531 493 aa39.09■■■■□ 3.85
CDKN3-202ENST00000335183 MBD5Q9P267 1494 aa39.07■■■■□ 3.85
CDKN3-202ENST00000335183 NCOA1Q15788 1441 aa39.06■■■■□ 3.84
CDKN3-202ENST00000335183 CAMSAP1Q5T5Y3 1602 aa39.05■■■■□ 3.84
CDKN3-202ENST00000335183 MYO3AQ8NEV4 1616 aa39.01■■■■□ 3.84
CDKN3-202ENST00000335183 NCOA2Q15596 1464 aa38.98■■■■□ 3.83
CDKN3-202ENST00000335183 RTEL1-TNFRSF6BF6WH68 1400 aa38.97■■■■□ 3.83
CDKN3-202ENST00000335183 ZNF142P52746 1687 aaPredicted RBP38.97■■■■□ 3.83
CDKN3-202ENST00000335183 PTPRKQ15262 1439 aa38.96■■■■□ 3.83
CDKN3-202ENST00000335183 CAMSAP2Q08AD1 1489 aa38.94■■■■□ 3.82
CDKN3-202ENST00000335183 CCDC141Q6ZP82 1450 aa38.92■■■■□ 3.82
CDKN3-202ENST00000335183 PPP6R1Q9UPN7 881 aa38.92■■■■□ 3.82
CDKN3-202ENST00000335183 LTBP4Q8N2S1 1624 aa38.92■■■■□ 3.82
CDKN3-202ENST00000335183 CEP170BQ9Y4F5 1589 aaPredicted RBP38.91■■■■□ 3.82
CDKN3-202ENST00000335183 DHX29Q7Z478 1369 aaKnown RBP38.9■■■■□ 3.82
CDKN3-202ENST00000335183 NCKAP5LQ9HCH0 1330 aa38.89■■■■□ 3.82
CDKN3-202ENST00000335183 PLA2R1Q13018 1463 aa38.82■■■■□ 3.81
CDKN3-202ENST00000335183 KIF3BO15066 747 aa38.82■■■■□ 3.8
CDKN3-202ENST00000335183 RSPH4AQ5TD94 716 aa38.81■■■■□ 3.8
CDKN3-202ENST00000335183 VPS8Q8N3P4 1428 aa38.8■■■■□ 3.8
CDKN3-202ENST00000335183 LOC105371045A0A1W2PR82 267 aa38.78■■■■□ 3.8
CDKN3-202ENST00000335183 ARHGEF5Q12774 1597 aa38.78■■■■□ 3.8
CDKN3-202ENST00000335183 PKD2Q13563 968 aa38.76■■■■□ 3.8
CDKN3-202ENST00000335183 IQSEC2Q5JU85 1478 aa38.76■■■■□ 3.8
CDKN3-202ENST00000335183 LRRC9Q6ZRR7 1453 aa38.75■■■■□ 3.79
CDKN3-202ENST00000335183 KDM5DQ9BY66 1539 aa38.74■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms