RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 FRMPD1Q5SYB0 1578 aa18.16■□□□□ 0.5
C9orf85-201ENST00000334731 EFCAB2Q5VUJ9 269 aa18.15■□□□□ 0.5
C9orf85-201ENST00000334731 SCAPERQ9BY12 1400 aa18.12■□□□□ 0.49
C9orf85-201ENST00000334731 CCDC18Q5T9S5 1454 aa18.12■□□□□ 0.49
C9orf85-201ENST00000334731 PCF11O94913 1555 aaKnown RBP18.12■□□□□ 0.49
C9orf85-201ENST00000334731 CFAP74Q9C0B2 1584 aa18.12■□□□□ 0.49
C9orf85-201ENST00000334731 KIF14Q15058 1648 aa18.11■□□□□ 0.49
C9orf85-201ENST00000334731 LRRIQ1Q96JM4 1722 aa18.1■□□□□ 0.49
C9orf85-201ENST00000334731 FYCO1Q9BQS8 1478 aa18.09■□□□□ 0.49
C9orf85-201ENST00000334731 ARID4BQ4LE39 1312 aaPredicted RBP18.08■□□□□ 0.49
C9orf85-201ENST00000334731 RICTORQ6R327 1708 aa18.07■□□□□ 0.48
C9orf85-201ENST00000334731 POGZQ7Z3K3 1410 aa18.06■□□□□ 0.48
C9orf85-201ENST00000334731 MAGI2Q86UL8 1455 aa18.05■□□□□ 0.48
C9orf85-201ENST00000334731 YEATS2Q9ULM3 1422 aa18.05■□□□□ 0.48
C9orf85-201ENST00000334731 ZMYM4Q5VZL5 1548 aa18.04■□□□□ 0.48
C9orf85-201ENST00000334731 ARHGAP5Q13017 1502 aa18.03■□□□□ 0.48
C9orf85-201ENST00000334731 ARHGEF40Q8TER5 1519 aa18.03■□□□□ 0.48
C9orf85-201ENST00000334731 LOC105371045A0A1W2PR82 267 aa18.03■□□□□ 0.48
C9orf85-201ENST00000334731 AFAP1Q8N556 730 aa18.03■□□□□ 0.48
C9orf85-201ENST00000334731 MYO5CQ9NQX4 1742 aa18.03■□□□□ 0.48
C9orf85-201ENST00000334731 CEP162Q5TB80 1403 aa18.02■□□□□ 0.48
C9orf85-201ENST00000334731 CNKSR2Q8WXI2 1034 aa18.02■□□□□ 0.48
C9orf85-201ENST00000334731 HOXD11P31277 338 aaPredicted RBP18.01■□□□□ 0.47
C9orf85-201ENST00000334731 ZFYVE16Q7Z3T8 1539 aa18.01■□□□□ 0.47
C9orf85-201ENST00000334731 ADAMTSL3P82987 1691 aa17.99■□□□□ 0.47
C9orf85-201ENST00000334731 PTPRMP28827 1452 aa17.99■□□□□ 0.47
C9orf85-201ENST00000334731 ZNF518AQ6AHZ1 1483 aa17.97■□□□□ 0.47
C9orf85-201ENST00000334731 ATP10AO60312 1499 aa17.96■□□□□ 0.47
C9orf85-201ENST00000334731 BCORL1Q5H9F3 1711 aa17.96■□□□□ 0.47
C9orf85-201ENST00000334731 ARHGEF12Q9NZN5 1544 aa17.95■□□□□ 0.46
C9orf85-201ENST00000334731 GPATCH8Q9UKJ3 1502 aaKnown RBP17.95■□□□□ 0.46
C9orf85-201ENST00000334731 CDC42BPBQ9Y5S2 1711 aa17.95■□□□□ 0.46
C9orf85-201ENST00000334731 MTUS2Q5JR59 1369 aa17.94■□□□□ 0.46
C9orf85-201ENST00000334731 MLECQ14165 292 aa17.94■□□□□ 0.46
C9orf85-201ENST00000334731 ZNF777Q9ULD5 760 aaPredicted RBP17.94■□□□□ 0.46
C9orf85-201ENST00000334731 TRAPPC8Q9Y2L5 1435 aa17.94■□□□□ 0.46
C9orf85-201ENST00000334731 PREX2Q70Z35 1606 aa17.94■□□□□ 0.46
C9orf85-201ENST00000334731 HECW2Q9P2P5 1572 aa17.93■□□□□ 0.46
C9orf85-201ENST00000334731 MYT1LQ9UL68 1186 aa17.93■□□□□ 0.46
C9orf85-201ENST00000334731 KDM5CP41229 1560 aa17.92■□□□□ 0.46
C9orf85-201ENST00000334731 C9orf84Q5VXU9 1444 aa17.92■□□□□ 0.46
C9orf85-201ENST00000334731 MADDQ8WXG6 1647 aa17.92■□□□□ 0.46
C9orf85-201ENST00000334731 CFDP1Q9UEE9 299 aaPredicted RBP17.92■□□□□ 0.46
C9orf85-201ENST00000334731 SIGLEC1Q9BZZ2 1709 aa17.92■□□□□ 0.46
C9orf85-201ENST00000334731 ABCC1P33527 1531 aa17.91■□□□□ 0.46
C9orf85-201ENST00000334731 CCNB3Q8WWL7 1395 aa17.91■□□□□ 0.46
C9orf85-201ENST00000334731 MLH3Q9UHC1 1453 aa17.9■□□□□ 0.46
C9orf85-201ENST00000334731 HNRNPMP52272 730 aaKnown RBP eCLIP17.89■□□□□ 0.456e-6■■■■□ 20.3
C9orf85-201ENST00000334731 CDC42BPAQ5VT25 1732 aa17.89■□□□□ 0.45
C9orf85-201ENST00000334731 RNF216Q9NWF9 866 aaPredicted RBP17.86■□□□□ 0.45
C9orf85-201ENST00000334731 SAMD9LQ8IVG5 1584 aa17.85■□□□□ 0.45
C9orf85-201ENST00000334731 KIAA1107Q9UPP5 1409 aa17.85■□□□□ 0.45
C9orf85-201ENST00000334731 RIMS1Q86UR5 1692 aaKnown RBP17.83■□□□□ 0.45
C9orf85-201ENST00000334731 DIP2CQ9Y2E4 1556 aa17.83■□□□□ 0.45
C9orf85-201ENST00000334731 EHBP1L1Q8N3D4 1523 aa17.83■□□□□ 0.45
C9orf85-201ENST00000334731 ZNF644Q9H582 1327 aaPredicted RBP17.83■□□□□ 0.44
C9orf85-201ENST00000334731 ITSN2Q9NZM3 1697 aa17.83■□□□□ 0.44
C9orf85-201ENST00000334731 PLEKHH2Q8IVE3 1493 aa17.82■□□□□ 0.44
C9orf85-201ENST00000334731 VPS8Q8N3P4 1428 aa17.82■□□□□ 0.44
C9orf85-201ENST00000334731 SPAG9O60271 1321 aaKnown RBP17.82■□□□□ 0.44
C9orf85-201ENST00000334731 SYCP2Q9BX26 1530 aa17.82■□□□□ 0.44
C9orf85-201ENST00000334731 REREQ9P2R6 1566 aa17.8■□□□□ 0.44
C9orf85-201ENST00000334731 ABCA6Q8N139 1617 aa17.8■□□□□ 0.44
C9orf85-201ENST00000334731 TIAM1Q13009 1591 aa17.79■□□□□ 0.44
C9orf85-201ENST00000334731 LMTK3Q96Q04 1460 aa17.78■□□□□ 0.44
C9orf85-201ENST00000334731 CEBPAP49715 358 aaPredicted RBP17.78■□□□□ 0.44
C9orf85-201ENST00000334731 AGLP35573 1532 aa17.77■□□□□ 0.44
C9orf85-201ENST00000334731 NCOA2Q15596 1464 aa17.77■□□□□ 0.44
C9orf85-201ENST00000334731 KIDINS220Q9ULH0 1771 aa17.77■□□□□ 0.44
C9orf85-201ENST00000334731 MBD5Q9P267 1494 aa17.75■□□□□ 0.43
C9orf85-201ENST00000334731 KANK4Q5T7N3 995 aaPredicted RBP17.75■□□□□ 0.43
C9orf85-201ENST00000334731 FER1L4A9Z1Z3 1794 aa17.74■□□□□ 0.43
C9orf85-201ENST00000334731 HSPA2P54652 639 aa17.74■□□□□ 0.43
C9orf85-201ENST00000334731 LRRC9Q6ZRR7 1453 aa17.74■□□□□ 0.43
C9orf85-201ENST00000334731 ESF1Q9H501 851 aaKnown RBP17.73■□□□□ 0.43
C9orf85-201ENST00000334731 ATP7AQ04656 1500 aa17.72■□□□□ 0.43
C9orf85-201ENST00000334731 SUPT6HQ7KZ85 1726 aaKnown RBP17.7■□□□□ 0.42
C9orf85-201ENST00000334731 RSPH4AQ5TD94 716 aa17.7■□□□□ 0.42
C9orf85-201ENST00000334731 RNF39Q9H2S5 420 aa17.7■□□□□ 0.42
C9orf85-201ENST00000334731 MAP3K1Q13233 1512 aa17.7■□□□□ 0.42
C9orf85-201ENST00000334731 INO80Q9ULG1 1556 aaPredicted RBP17.69■□□□□ 0.42
C9orf85-201ENST00000334731 A2MP01023 1474 aa17.69■□□□□ 0.42
C9orf85-201ENST00000334731 RTEL1-TNFRSF6BF6WH68 1400 aa17.68■□□□□ 0.42
C9orf85-201ENST00000334731 DCAF8L1A6NGE4 600 aa17.67■□□□□ 0.42
C9orf85-201ENST00000334731 CAMSAP2Q08AD1 1489 aa17.67■□□□□ 0.42
C9orf85-201ENST00000334731 CNTLNQ9NXG0 1405 aa17.66■□□□□ 0.42
C9orf85-201ENST00000334731 ILDR1Q86SU0 546 aaPredicted RBP17.66■□□□□ 0.42
C9orf85-201ENST00000334731 GGT6Q6P531 493 aa17.65■□□□□ 0.42
C9orf85-201ENST00000334731 CCDC141Q6ZP82 1450 aa17.64■□□□□ 0.41
C9orf85-201ENST00000334731 APLP2Q06481 763 aa17.64■□□□□ 0.41
C9orf85-201ENST00000334731 PLXNC1O60486 1568 aa17.64■□□□□ 0.41
C9orf85-201ENST00000334731 ZMYM3Q14202 1370 aa17.64■□□□□ 0.41
C9orf85-201ENST00000334731 DHX29Q7Z478 1369 aaKnown RBP17.64■□□□□ 0.41
C9orf85-201ENST00000334731 TSPY4P0CV99 314 aa17.62■□□□□ 0.41
C9orf85-201ENST00000334731 TSPY10P0CW01 314 aa17.62■□□□□ 0.41
C9orf85-201ENST00000334731 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
C9orf85-201ENST00000334731 UHRF1BP1Q6BDS2 1440 aa17.61■□□□□ 0.41
C9orf85-201ENST00000334731 MYOM3Q5VTT5 1437 aa17.6■□□□□ 0.41
C9orf85-201ENST00000334731 MIA2Q96PC5 1412 aa17.6■□□□□ 0.41
C9orf85-201ENST00000334731 C3P01024 1663 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms