RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 SYTL4Q96C24 671 aaPredicted RBP16.32■□□□□ 0.2
KPNA4-201ENST00000334256 HIRIP3Q9BW71 556 aaPredicted RBP16.32■□□□□ 0.2
KPNA4-201ENST00000334256 DDX10Q13206 875 aaKnown RBP16.32■□□□□ 0.2
KPNA4-201ENST00000334256 CALRP27797 417 aaKnown RBP16.31■□□□□ 0.2
KPNA4-201ENST00000334256 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.3■□□□□ 0.24e-6■■■■■ 76.1
KPNA4-201ENST00000334256 BECN1Q14457 450 aa16.3■□□□□ 0.2
KPNA4-201ENST00000334256 GOLGA6L4A6NEF3 574 aa16.29■□□□□ 0.2
KPNA4-201ENST00000334256 SRPK2P78362 688 aaKnown RBP16.29■□□□□ 0.2
KPNA4-201ENST00000334256 PLCD3Q8N3E9 789 aa16.29■□□□□ 0.2
KPNA4-201ENST00000334256 GOLGA6L6A8MZA4 724 aa16.29■□□□□ 0.2
KPNA4-201ENST00000334256 STK26Q9P289 416 aa16.28■□□□□ 0.2
KPNA4-201ENST00000334256 CHAF1AQ13111 956 aaPredicted RBP16.28■□□□□ 0.2
KPNA4-201ENST00000334256 SLC4A3P48751 1232 aa16.27■□□□□ 0.2
KPNA4-201ENST00000334256 TOMM22Q9NS69 142 aa16.27■□□□□ 0.2
KPNA4-201ENST00000334256 L1TD1Q5T7N2 865 aaKnown RBP16.25■□□□□ 0.19
KPNA4-201ENST00000334256 NUTM2FA1L443 756 aa16.25■□□□□ 0.19
KPNA4-201ENST00000334256 MAPK8IP3Q9UPT6 1336 aa16.25■□□□□ 0.19
KPNA4-201ENST00000334256 MYCNP04198 464 aaPredicted RBP16.23■□□□□ 0.19
KPNA4-201ENST00000334256 CFAP53Q96M91 514 aa16.22■□□□□ 0.19
KPNA4-201ENST00000334256 SPDYE4A6NLX3 237 aa16.22■□□□□ 0.19
KPNA4-201ENST00000334256 HSP90B1P14625 803 aaKnown RBP16.22■□□□□ 0.19
KPNA4-201ENST00000334256 PPP4R2Q9NY27 417 aa16.22■□□□□ 0.19
KPNA4-201ENST00000334256 RTF1Q92541 710 aaKnown RBP16.21■□□□□ 0.19
KPNA4-201ENST00000334256 FRAT1Q92837 279 aaPredicted RBP16.21■□□□□ 0.18
KPNA4-201ENST00000334256 LTV1Q96GA3 475 aaPredicted RBP16.2■□□□□ 0.18
KPNA4-201ENST00000334256 HSP90AB1P08238 724 aaKnown RBP16.2■□□□□ 0.18
KPNA4-201ENST00000334256 PES1O00541 588 aaKnown RBP16.2■□□□□ 0.18
KPNA4-201ENST00000334256 TONSLQ96HA7 1378 aa16.2■□□□□ 0.18
KPNA4-201ENST00000334256 PTMSP20962 102 aa16.19■□□□□ 0.18
KPNA4-201ENST00000334256 RGS3P49796 1198 aa16.18■□□□□ 0.18
KPNA4-201ENST00000334256 CCDC97Q96F63 343 aaPredicted RBP16.18■□□□□ 0.18
KPNA4-201ENST00000334256 MSNP26038 577 aaKnown RBP16.18■□□□□ 0.18
KPNA4-201ENST00000334256 NGEFQ8N5V2 710 aa16.16■□□□□ 0.18
KPNA4-201ENST00000334256 GRM1Q13255 1194 aa16.14■□□□□ 0.17
KPNA4-201ENST00000334256 DDRGK1Q96HY6 314 aa16.14■□□□□ 0.17
KPNA4-201ENST00000334256 NRDCO43847 1150 aa16.13■□□□□ 0.17
KPNA4-201ENST00000334256 TMEM132AQ24JP5 1023 aa16.12■□□□□ 0.17
KPNA4-201ENST00000334256 GZF1Q9H116 711 aaPredicted RBP16.12■□□□□ 0.17
KPNA4-201ENST00000334256 KAT6BQ8WYB5 2073 aa16.11■□□□□ 0.17
KPNA4-201ENST00000334256 APPP05067 770 aa16.11■□□□□ 0.17
KPNA4-201ENST00000334256 MRS2Q9HD23 443 aa16.1■□□□□ 0.17
KPNA4-201ENST00000334256 FOXD1Q16676 465 aa16.09■□□□□ 0.17
KPNA4-201ENST00000334256 MAP3K9P80192 1104 aa16.09■□□□□ 0.17
KPNA4-201ENST00000334256 DHX16O60231 1041 aaKnown RBP16.08■□□□□ 0.17
KPNA4-201ENST00000334256 PIP4K2BP78356 416 aa16.08■□□□□ 0.16
KPNA4-201ENST00000334256 CHMP4BP1P59074 171 aa16.07■□□□□ 0.16
KPNA4-201ENST00000334256 BCL11BQ9C0K0 894 aaPredicted RBP16.07■□□□□ 0.16
KPNA4-201ENST00000334256 GGT6Q6P531 493 aa16.07■□□□□ 0.16
KPNA4-201ENST00000334256 HDGFP51858 240 aaKnown RBP16.07■□□□□ 0.16
KPNA4-201ENST00000334256 RRP7BPQ9NSQ0 103 aa16.07■□□□□ 0.16
KPNA4-201ENST00000334256 TMEM87AQ8NBN3 555 aa16.06■□□□□ 0.16
KPNA4-201ENST00000334256 CCDC43Q96MW1 224 aaKnown RBP16.06■□□□□ 0.16
KPNA4-201ENST00000334256 NUDCQ9Y266 331 aa16.06■□□□□ 0.16
KPNA4-201ENST00000334256 R3HCC1Q9Y3T6 440 aaKnown RBP16.05■□□□□ 0.16
KPNA4-201ENST00000334256 DHX37Q8IY37 1157 aaKnown RBP16.04■□□□□ 0.16
KPNA4-201ENST00000334256 KNSTRNQ9Y448 316 aa16.04■□□□□ 0.16
KPNA4-201ENST00000334256 MTMR7Q9Y216 660 aa16.03■□□□□ 0.16
KPNA4-201ENST00000334256 NOL10Q9BSC4 688 aaKnown RBP16.03■□□□□ 0.16
KPNA4-201ENST00000334256 NUTM2BA6NNL0 878 aaPredicted RBP16.02■□□□□ 0.15
KPNA4-201ENST00000334256 NUTM2EB1AL46 878 aaPredicted RBP16.02■□□□□ 0.15
KPNA4-201ENST00000334256 NUTM2AQ8IVF1 878 aaPredicted RBP16.02■□□□□ 0.15
KPNA4-201ENST00000334256 WWC2Q6AWC2 1192 aa16.01■□□□□ 0.15
KPNA4-201ENST00000334256 VPS37DQ86XT2 251 aa16.01■□□□□ 0.15
KPNA4-201ENST00000334256 GOLGA6L1Q8N7Z2 621 aa16.01■□□□□ 0.15
KPNA4-201ENST00000334256 CC2D1BQ5T0F9 858 aaKnown RBP16■□□□□ 0.15
KPNA4-201ENST00000334256 KIAA1211Q6ZU35 1233 aa16■□□□□ 0.15
KPNA4-201ENST00000334256 ZFYVE27Q5T4F4 411 aa15.99■□□□□ 0.15
KPNA4-201ENST00000334256 IKQ13123 557 aaPredicted RBP15.99■□□□□ 0.15
KPNA4-201ENST00000334256 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
KPNA4-201ENST00000334256 CA8P35219 290 aa15.97■□□□□ 0.15
KPNA4-201ENST00000334256 NUTM2DQ5VT03 806 aaPredicted RBP15.97■□□□□ 0.15
KPNA4-201ENST00000334256 PLEKHD1A6NEE1 506 aa15.97■□□□□ 0.15
KPNA4-201ENST00000334256 CCAR2Q8N163 923 aaKnown RBP15.96■□□□□ 0.15
KPNA4-201ENST00000334256 FYB1O15117 783 aa15.96■□□□□ 0.15
KPNA4-201ENST00000334256 NGDNQ8NEJ9 315 aaKnown RBP15.96■□□□□ 0.15
KPNA4-201ENST00000334256 CSRNP3Q8WYN3 585 aa15.96■□□□□ 0.14
KPNA4-201ENST00000334256 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.95■□□□□ 0.14
KPNA4-201ENST00000334256 TPD52L1Q16890 204 aaPredicted RBP15.94■□□□□ 0.14
KPNA4-201ENST00000334256 PODXL2Q9NZ53 605 aa15.93■□□□□ 0.14
KPNA4-201ENST00000334256 NOL8Q76FK4 1167 aaKnown RBP15.93■□□□□ 0.14
KPNA4-201ENST00000334256 RBM33Q96EV2 1170 aaKnown RBP15.93■□□□□ 0.14
KPNA4-201ENST00000334256 USP35Q9P2H5 1018 aa15.93■□□□□ 0.14
KPNA4-201ENST00000334256 SETQ01105 290 aaPredicted RBP15.93■□□□□ 0.14
KPNA4-201ENST00000334256 ODF2Q5BJF6 829 aa15.92■□□□□ 0.14
KPNA4-201ENST00000334256 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.92■□□□□ 0.14
KPNA4-201ENST00000334256 FAM177BA6PVY3 158 aa15.92■□□□□ 0.14
KPNA4-201ENST00000334256 AMOTL1Q8IY63 956 aa15.92■□□□□ 0.14
KPNA4-201ENST00000334256 FOXD4L1Q9NU39 408 aa15.92■□□□□ 0.14
KPNA4-201ENST00000334256 FOXD4L5Q5VV16 416 aaPredicted RBP15.91■□□□□ 0.14
KPNA4-201ENST00000334256 FOXD4L4Q8WXT5 416 aaPredicted RBP15.91■□□□□ 0.14
KPNA4-201ENST00000334256 MCCP23508 829 aa15.91■□□□□ 0.14
KPNA4-201ENST00000334256 SLC4A10Q6U841 1118 aa15.91■□□□□ 0.14
KPNA4-201ENST00000334256 PLCD4Q9BRC7 762 aa15.91■□□□□ 0.14
KPNA4-201ENST00000334256 ECM2O94769 699 aaPredicted RBP15.9■□□□□ 0.14
KPNA4-201ENST00000334256 STAC3Q96MF2 364 aa15.9■□□□□ 0.14
KPNA4-201ENST00000334256 DEKP35659 375 aaKnown RBP15.9■□□□□ 0.14
KPNA4-201ENST00000334256 TRIM6-TRIM34B2RNG4 842 aa15.89■□□□□ 0.13
KPNA4-201ENST00000334256 EID1Q9Y6B2 187 aa15.89■□□□□ 0.13
KPNA4-201ENST00000334256 RSPH4AQ5TD94 716 aa15.89■□□□□ 0.13
KPNA4-201ENST00000334256 PCMTD1Q96MG8 357 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms