RNA–Protein interactions for RNA: ENST00000334126.11

C2CD3-202, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C2CD3, Length 7,960 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-202ENST00000334126 GPS2Q13227 327 aa11.71□□□□□ -0.53
C2CD3-202ENST00000334126 NFKBIBQ15653 356 aa11.71□□□□□ -0.53
C2CD3-202ENST00000334126 PMFBP1Q8TBY8 1022 aa11.71□□□□□ -0.53
C2CD3-202ENST00000334126 NGEFQ8N5V2 710 aa11.7□□□□□ -0.54
C2CD3-202ENST00000334126 PDE4CQ08493 712 aa11.69□□□□□ -0.54
C2CD3-202ENST00000334126 ZRSR1Q15695 479 aaKnown RBP11.69□□□□□ -0.54
C2CD3-202ENST00000334126 CWC15Q9P013 229 aaKnown RBP11.69□□□□□ -0.54
C2CD3-202ENST00000334126 TPM3P06753 285 aa11.69□□□□□ -0.54
C2CD3-202ENST00000334126 DIAPH3Q9NSV4 1193 aa11.68□□□□□ -0.54
C2CD3-202ENST00000334126 CCDC173Q0VFZ6 552 aa11.68□□□□□ -0.54
C2CD3-202ENST00000334126 ARHGAP35Q9NRY4 1499 aa11.68□□□□□ -0.54
C2CD3-202ENST00000334126 MTUS2Q5JR59 1369 aa11.68□□□□□ -0.54
C2CD3-202ENST00000334126 ZNF771Q7L3S4 317 aaPredicted RBP11.67□□□□□ -0.54
C2CD3-202ENST00000334126 CALD1Q05682 793 aaKnown RBP11.67□□□□□ -0.54
C2CD3-202ENST00000334126 PDCL2Q8N4E4 241 aa11.67□□□□□ -0.54
C2CD3-202ENST00000334126 ZMYND15Q9H091 742 aa11.66□□□□□ -0.54
C2CD3-202ENST00000334126 APPP05067 770 aa11.66□□□□□ -0.54
C2CD3-202ENST00000334126 IL27Q8NEV9 243 aa11.66□□□□□ -0.54
C2CD3-202ENST00000334126 RAB3GAP2Q9H2M9 1393 aa11.65□□□□□ -0.54
C2CD3-202ENST00000334126 KIF27Q86VH2 1401 aa11.64□□□□□ -0.55
C2CD3-202ENST00000334126 TAF7LQ5H9L4 462 aa11.64□□□□□ -0.55
C2CD3-202ENST00000334126 CHMP5Q9NZZ3 219 aa11.64□□□□□ -0.55
C2CD3-202ENST00000334126 KIF16BQ96L93 1317 aa11.64□□□□□ -0.55
C2CD3-202ENST00000334126 FRAT1Q92837 279 aaPredicted RBP11.64□□□□□ -0.55
C2CD3-202ENST00000334126 CCDC39Q9UFE4 941 aa11.64□□□□□ -0.55
C2CD3-202ENST00000334126 FTSJ3Q8IY81 847 aaKnown RBP11.64□□□□□ -0.55
C2CD3-202ENST00000334126 PPP1R15AO75807 674 aaPredicted RBP11.63□□□□□ -0.55
C2CD3-202ENST00000334126 MCCP23508 829 aa11.63□□□□□ -0.55
C2CD3-202ENST00000334126 RWDD1Q9H446 243 aaPredicted RBP11.63□□□□□ -0.55
C2CD3-202ENST00000334126 RGS3P49796 1198 aa11.62□□□□□ -0.55
C2CD3-202ENST00000334126 CAVIN1Q6NZI2 390 aaKnown RBP11.62□□□□□ -0.55
C2CD3-202ENST00000334126 SMG6Q86US8 1419 aaKnown RBP11.62□□□□□ -0.55
C2CD3-202ENST00000334126 KIF15Q9NS87 1388 aa11.62□□□□□ -0.55
C2CD3-202ENST00000334126 RRP1P56182 461 aaKnown RBP11.61□□□□□ -0.55
C2CD3-202ENST00000334126 FAM13BQ9NYF5 915 aa11.61□□□□□ -0.55
C2CD3-202ENST00000334126 MCM5P33992 734 aa11.61□□□□□ -0.55
C2CD3-202ENST00000334126 DHX8Q14562 1220 aaKnown RBP11.61□□□□□ -0.55
C2CD3-202ENST00000334126 NINLQ9Y2I6 1382 aa11.6□□□□□ -0.55
C2CD3-202ENST00000334126 KIF3AQ9Y496 699 aa11.6□□□□□ -0.55
C2CD3-202ENST00000334126 ANKRD30AQ9BXX3 1397 aa11.6□□□□□ -0.55
C2CD3-202ENST00000334126 FMN1Q68DA7 1419 aa11.6□□□□□ -0.55
C2CD3-202ENST00000334126 CLCN1P35523 988 aa11.59□□□□□ -0.55
C2CD3-202ENST00000334126 CNTLNQ9NXG0 1405 aa11.59□□□□□ -0.55
C2CD3-202ENST00000334126 CGNL1Q0VF96 1302 aa11.58□□□□□ -0.55
C2CD3-202ENST00000334126 PLEKHH2Q8IVE3 1493 aa11.58□□□□□ -0.56
C2CD3-202ENST00000334126 ESPNB1AK53 854 aa11.58□□□□□ -0.56
C2CD3-202ENST00000334126 BRPF3Q9ULD4 1205 aa11.58□□□□□ -0.56
C2CD3-202ENST00000334126 TERF1P54274 439 aa11.58□□□□□ -0.56
C2CD3-202ENST00000334126 MSH5O43196 834 aa11.58□□□□□ -0.56
C2CD3-202ENST00000334126 LETM1O95202 739 aaPredicted RBP11.58□□□□□ -0.56
C2CD3-202ENST00000334126 TOP2AP11388 1531 aaKnown RBP11.58□□□□□ -0.56
C2CD3-202ENST00000334126 WASHC2AQ641Q2 1341 aa11.58□□□□□ -0.56
C2CD3-202ENST00000334126 HAP1P54257 671 aaPredicted RBP11.57□□□□□ -0.56
C2CD3-202ENST00000334126 DYNC1I1O14576 645 aa11.57□□□□□ -0.56
C2CD3-202ENST00000334126 KNSTRNQ9Y448 316 aa11.57□□□□□ -0.56
C2CD3-202ENST00000334126 NASPP49321 788 aaPredicted RBP11.56□□□□□ -0.56
C2CD3-202ENST00000334126 CFAP53Q96M91 514 aa11.56□□□□□ -0.56
C2CD3-202ENST00000334126 WASHC2CQ9Y4E1 1318 aa11.56□□□□□ -0.56
C2CD3-202ENST00000334126 GTPBP4Q9BZE4 634 aaKnown RBP11.56□□□□□ -0.56
C2CD3-202ENST00000334126 SLKQ9H2G2 1235 aaPredicted RBP11.56□□□□□ -0.56
C2CD3-202ENST00000334126 SMARCA2P51531 1590 aa11.56□□□□□ -0.56
C2CD3-202ENST00000334126 BACH2Q9BYV9 841 aa11.56□□□□□ -0.56
C2CD3-202ENST00000334126 ATP6V1DQ9Y5K8 247 aa11.55□□□□□ -0.56
C2CD3-202ENST00000334126 ARGLU1Q9NWB6 273 aaPredicted RBP11.55□□□□□ -0.56
C2CD3-202ENST00000334126 NLRP13Q86W25 1043 aa11.55□□□□□ -0.56
C2CD3-202ENST00000334126 GZF1Q9H116 711 aaPredicted RBP11.55□□□□□ -0.56
C2CD3-202ENST00000334126 CALCOCO1Q9P1Z2 691 aa11.54□□□□□ -0.56
C2CD3-202ENST00000334126 NUCB2P80303 420 aa11.54□□□□□ -0.56
C2CD3-202ENST00000334126 CIZ1Q9ULV3 898 aaPredicted RBP11.54□□□□□ -0.56
C2CD3-202ENST00000334126 USP8P40818 1118 aa11.54□□□□□ -0.56
C2CD3-202ENST00000334126 DRC7Q8IY82 874 aa11.54□□□□□ -0.56
C2CD3-202ENST00000334126 KIF20AO95235 890 aa11.53□□□□□ -0.56
C2CD3-202ENST00000334126 SMAP1Q8IYB5 467 aaPredicted RBP11.53□□□□□ -0.56
C2CD3-202ENST00000334126 ZSCAN30Q86W11 494 aa11.53□□□□□ -0.56
C2CD3-202ENST00000334126 DNAJC2Q99543 621 aaKnown RBP11.53□□□□□ -0.56
C2CD3-202ENST00000334126 TPM4P67936 248 aa11.53□□□□□ -0.56
C2CD3-202ENST00000334126 MYBBP1AQ9BQG0 1328 aaKnown RBP11.53□□□□□ -0.56
C2CD3-202ENST00000334126 CUX1P39880 1505 aa11.52□□□□□ -0.56
C2CD3-202ENST00000334126 IPO8O15397 1037 aaKnown RBP11.52□□□□□ -0.56
C2CD3-202ENST00000334126 ST18O60284 1047 aa11.52□□□□□ -0.56
C2CD3-202ENST00000334126 ERICH3Q5RHP9 1530 aa11.52□□□□□ -0.57
C2CD3-202ENST00000334126 CTR9Q6PD62 1173 aa11.52□□□□□ -0.57
C2CD3-202ENST00000334126 PRKRIP1Q9H875 184 aaPredicted RBP11.52□□□□□ -0.57
C2CD3-202ENST00000334126 HS1BP3Q53T59 392 aa11.51□□□□□ -0.57
C2CD3-202ENST00000334126 RRBP1Q9P2E9 1410 aaKnown RBP11.51□□□□□ -0.57
C2CD3-202ENST00000334126 GOLGA6L4A6NEF3 574 aa11.51□□□□□ -0.57
C2CD3-202ENST00000334126 KIAA1211Q6ZU35 1233 aa11.51□□□□□ -0.57
C2CD3-202ENST00000334126 CCDC18Q5T9S5 1454 aa11.5□□□□□ -0.57
C2CD3-202ENST00000334126 RNF20Q5VTR2 975 aa11.5□□□□□ -0.57
C2CD3-202ENST00000334126 HSPA5P11021 654 aaKnown RBP11.5□□□□□ -0.57
C2CD3-202ENST00000334126 AXDND1Q5T1B0 1012 aaPredicted RBP11.5□□□□□ -0.57
C2CD3-202ENST00000334126 DDX49Q9Y6V7 483 aaKnown RBP11.5□□□□□ -0.57
C2CD3-202ENST00000334126 CENPJQ9HC77 1338 aaPredicted RBP11.5□□□□□ -0.57
C2CD3-202ENST00000334126 MBD3O95983 291 aa11.5□□□□□ -0.57
C2CD3-202ENST00000334126 ACBD3Q9H3P7 528 aa11.5□□□□□ -0.57
C2CD3-202ENST00000334126 BRD4O60885 1362 aaPredicted RBP11.49□□□□□ -0.57
C2CD3-202ENST00000334126 HMGB1P09429 215 aaKnown RBP11.49□□□□□ -0.57
C2CD3-202ENST00000334126 GRPEL1Q9HAV7 217 aa11.48□□□□□ -0.57
C2CD3-202ENST00000334126 TRAK2O60296 914 aa11.48□□□□□ -0.57
C2CD3-202ENST00000334126 PAK3O75914 559 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms