RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 CAMSAP2Q08AD1 1489 aa35.02■■■■□ 3.2
TSEN54-201ENST00000333213 ZNF777Q9ULD5 760 aaPredicted RBP35■■■■□ 3.19
TSEN54-201ENST00000333213 MYO5CQ9NQX4 1742 aa34.96■■■■□ 3.19
TSEN54-201ENST00000333213 PLCH2O75038 1416 aa34.94■■■■□ 3.18
TSEN54-201ENST00000333213 MAPKBP1O60336 1514 aa34.94■■■■□ 3.18
TSEN54-201ENST00000333213 ABCA9Q8IUA7 1624 aa34.93■■■■□ 3.18
TSEN54-201ENST00000333213 ARHGAP5Q13017 1502 aa34.91■■■■□ 3.18
TSEN54-201ENST00000333213 ABCC5O15440 1437 aa34.91■■■■□ 3.18
TSEN54-201ENST00000333213 SAMD9LQ8IVG5 1584 aa34.91■■■■□ 3.18
TSEN54-201ENST00000333213 DNMT1P26358 1616 aaKnown RBP34.9■■■■□ 3.18
TSEN54-201ENST00000333213 DAPK1P53355 1430 aa34.89■■■■□ 3.18
TSEN54-201ENST00000333213 CHIC2Q9UKJ5 165 aa34.83■■■■□ 3.17
TSEN54-201ENST00000333213 MBD5Q9P267 1494 aa34.82■■■■□ 3.16
TSEN54-201ENST00000333213 ARAP3Q8WWN8 1544 aa34.81■■■■□ 3.16
TSEN54-201ENST00000333213 SETD5Q9C0A6 1442 aa34.8■■■■□ 3.16
TSEN54-201ENST00000333213 HNRNPMP52272 730 aaKnown RBP eCLIP34.79■■■■□ 3.16
TSEN54-201ENST00000333213 RAB3GAP2Q9H2M9 1393 aa34.79■■■■□ 3.16
TSEN54-201ENST00000333213 EFCAB2Q5VUJ9 269 aa34.77■■■■□ 3.16
TSEN54-201ENST00000333213 HFM1A2PYH4 1435 aa34.77■■■■□ 3.16
TSEN54-201ENST00000333213 SYCP2Q9BX26 1530 aa34.74■■■■□ 3.15
TSEN54-201ENST00000333213 NAIPQ13075 1403 aa34.74■■■■□ 3.15
TSEN54-201ENST00000333213 CROCC2H7BZ55 1655 aa34.74■■■■□ 3.15
TSEN54-201ENST00000333213 ARHGEF5Q12774 1597 aa34.73■■■■□ 3.15
TSEN54-201ENST00000333213 AKNAQ7Z591 1439 aa34.73■■■■□ 3.15
TSEN54-201ENST00000333213 ARHGEF12Q9NZN5 1544 aa34.73■■■■□ 3.15
TSEN54-201ENST00000333213 RRP7BPQ9NSQ0 103 aa34.72■■■■□ 3.15
TSEN54-201ENST00000333213 KIAA1107Q9UPP5 1409 aa34.72■■■■□ 3.15
TSEN54-201ENST00000333213 CD109Q6YHK3 1445 aa34.71■■■■□ 3.15
TSEN54-201ENST00000333213 FANCAO15360 1455 aa34.7■■■■□ 3.15
TSEN54-201ENST00000333213 ROCK1Q13464 1354 aa34.68■■■■□ 3.14
TSEN54-201ENST00000333213 ABCC1P33527 1531 aa34.68■■■■□ 3.14
TSEN54-201ENST00000333213 PLEKHH2Q8IVE3 1493 aa34.68■■■■□ 3.14
TSEN54-201ENST00000333213 CCER1Q8TC90 406 aaPredicted RBP34.67■■■■□ 3.14
TSEN54-201ENST00000333213 CCDC141Q6ZP82 1450 aa34.66■■■■□ 3.14
TSEN54-201ENST00000333213 SHANK2Q9UPX8 1470 aa34.64■■■■□ 3.14
TSEN54-201ENST00000333213 GLI2P10070 1586 aa34.64■■■■□ 3.14
TSEN54-201ENST00000333213 DIP2BQ9P265 1576 aa34.64■■■■□ 3.14
TSEN54-201ENST00000333213 DNAJC5Q9H3Z4 198 aa34.63■■■■□ 3.13
TSEN54-201ENST00000333213 NCOA1Q15788 1441 aa34.63■■■■□ 3.13
TSEN54-201ENST00000333213 ADGRL2O95490 1459 aa34.63■■■■□ 3.13
TSEN54-201ENST00000333213 GCC2Q8IWJ2 1684 aa34.62■■■■□ 3.13
TSEN54-201ENST00000333213 C9orf84Q5VXU9 1444 aa34.62■■■■□ 3.13
TSEN54-201ENST00000333213 RSPH4AQ5TD94 716 aa34.62■■■■□ 3.13
TSEN54-201ENST00000333213 MAP3K4Q9Y6R4 1608 aa34.61■■■■□ 3.13
TSEN54-201ENST00000333213 ADGBQ8N7X0 1667 aa34.59■■■■□ 3.13
TSEN54-201ENST00000333213 TSPY4P0CV99 314 aa34.59■■■■□ 3.13
TSEN54-201ENST00000333213 TSPY10P0CW01 314 aa34.59■■■■□ 3.13
TSEN54-201ENST00000333213 TRAPPC8Q9Y2L5 1435 aa34.59■■■■□ 3.13
TSEN54-201ENST00000333213 KDM6BO15054 1643 aa34.58■■■■□ 3.13
TSEN54-201ENST00000333213 FAM69CQ0P6D2 419 aa34.57■■■■□ 3.13
TSEN54-201ENST00000333213 DHX57Q6P158 1386 aaKnown RBP34.57■■■■□ 3.12
TSEN54-201ENST00000333213 ADGRL1O94910 1474 aa34.54■■■■□ 3.12
TSEN54-201ENST00000333213 ANKRD30AQ9BXX3 1397 aa34.53■■■■□ 3.12
TSEN54-201ENST00000333213 MAST1Q9Y2H9 1570 aa34.51■■■■□ 3.11
TSEN54-201ENST00000333213 SCAPERQ9BY12 1400 aa34.51■■■■□ 3.11
TSEN54-201ENST00000333213 AFAP1Q8N556 730 aa34.49■■■■□ 3.11
TSEN54-201ENST00000333213 CFAP74Q9C0B2 1584 aa34.47■■■■□ 3.11
TSEN54-201ENST00000333213 KIF13AQ9H1H9 1805 aa34.44■■■■□ 3.1
TSEN54-201ENST00000333213 NEO1Q92859 1461 aa34.44■■■■□ 3.1
TSEN54-201ENST00000333213 KIF15Q9NS87 1388 aa34.42■■■■□ 3.1
TSEN54-201ENST00000333213 PPRC1Q5VV67 1664 aaKnown RBP34.39■■■■□ 3.1
TSEN54-201ENST00000333213 ANKRD50Q9ULJ7 1429 aa34.38■■■■□ 3.09
TSEN54-201ENST00000333213 PLXNC1O60486 1568 aa34.37■■■■□ 3.09
TSEN54-201ENST00000333213 SPAG9O60271 1321 aaKnown RBP34.36■■■■□ 3.09
TSEN54-201ENST00000333213 TSPOAP1O95153 1857 aa34.36■■■■□ 3.09
TSEN54-201ENST00000333213 ZFYVE16Q7Z3T8 1539 aa34.36■■■■□ 3.09
TSEN54-201ENST00000333213 RTEL1-TNFRSF6BF6WH68 1400 aa34.34■■■■□ 3.09
TSEN54-201ENST00000333213 POGZQ7Z3K3 1410 aa34.33■■■■□ 3.09
TSEN54-201ENST00000333213 ZNF518AQ6AHZ1 1483 aa34.32■■■■□ 3.09
TSEN54-201ENST00000333213 INO80Q9ULG1 1556 aaPredicted RBP34.31■■■■□ 3.08
TSEN54-201ENST00000333213 ZEB1P37275 1124 aaPredicted RBP34.31■■■■□ 3.08
TSEN54-201ENST00000333213 KDM5CP41229 1560 aa34.28■■■■□ 3.08
TSEN54-201ENST00000333213 ATP7AQ04656 1500 aa34.28■■■■□ 3.08
TSEN54-201ENST00000333213 CLSPNQ9HAW4 1339 aa34.27■■■■□ 3.08
TSEN54-201ENST00000333213 TRIM52Q96A61 297 aa34.27■■■■□ 3.08
TSEN54-201ENST00000333213 RAPGEF3O95398 923 aa34.26■■■■□ 3.07
TSEN54-201ENST00000333213 DENND4BO75064 1496 aaPredicted RBP34.25■■■■□ 3.07
TSEN54-201ENST00000333213 TEX14Q8IWB6 1497 aa34.23■■■■□ 3.07
TSEN54-201ENST00000333213 DUOX2Q9NRD8 1548 aa34.23■■■■□ 3.07
TSEN54-201ENST00000333213 KIDINS220Q9ULH0 1771 aa34.23■■■■□ 3.07
TSEN54-201ENST00000333213 RICTORQ6R327 1708 aa34.2■■■■□ 3.07
TSEN54-201ENST00000333213 MLH3Q9UHC1 1453 aa34.18■■■■□ 3.06
TSEN54-201ENST00000333213 MPHOSPH9Q99550 1183 aa34.17■■■■□ 3.06
TSEN54-201ENST00000333213 ACIN1Q9UKV3 1341 aaKnown RBP34.17■■■■□ 3.06
TSEN54-201ENST00000333213 FRMPD1Q5SYB0 1578 aa34.15■■■■□ 3.06
TSEN54-201ENST00000333213 ERBINQ96RT1 1412 aa34.15■■■■□ 3.06
TSEN54-201ENST00000333213 MYT1LQ9UL68 1186 aa34.15■■■■□ 3.06
TSEN54-201ENST00000333213 PZPP20742 1482 aa34.15■■■■□ 3.06
TSEN54-201ENST00000333213 HECW2Q9P2P5 1572 aa34.14■■■■□ 3.06
TSEN54-201ENST00000333213 NUP155O75694 1391 aa34.09■■■■□ 3.05
TSEN54-201ENST00000333213 COL17A1Q9UMD9 1497 aaPredicted RBP34.08■■■■□ 3.05
TSEN54-201ENST00000333213 KDM5DQ9BY66 1539 aa34.07■■■■□ 3.05
TSEN54-201ENST00000333213 SLC4A1APQ9BWU0 796 aaKnown RBP34.06■■■■□ 3.04
TSEN54-201ENST00000333213 DHX29Q7Z478 1369 aaKnown RBP34.06■■■■□ 3.04
TSEN54-201ENST00000333213 UNC13BO14795 1591 aa34.06■■■■□ 3.04
TSEN54-201ENST00000333213 ABCA6Q8N139 1617 aa34.05■■■■□ 3.04
TSEN54-201ENST00000333213 SIN3AQ96ST3 1273 aa34.04■■■■□ 3.04
TSEN54-201ENST00000333213 FOXD1Q16676 465 aa34.04■■■■□ 3.04
TSEN54-201ENST00000333213 TRHP20396 242 aaPredicted RBP34.02■■■■□ 3.04
TSEN54-201ENST00000333213 ZMYM4Q5VZL5 1548 aa34.01■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms