RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 ITSN2Q9NZM3 1697 aa32.1■■■□□ 2.73
MRPL40-201ENST00000333130 CCNB3Q8WWL7 1395 aa32.09■■■□□ 2.73
MRPL40-201ENST00000333130 EFCAB2Q5VUJ9 269 aa32.08■■■□□ 2.73
MRPL40-201ENST00000333130 AKNAQ7Z591 1439 aa32.07■■■□□ 2.73
MRPL40-201ENST00000333130 NCOA2Q15596 1464 aa32.04■■■□□ 2.72
MRPL40-201ENST00000333130 ADGRL1O94910 1474 aa32.02■■■□□ 2.72
MRPL40-201ENST00000333130 COL17A1Q9UMD9 1497 aaPredicted RBP32.01■■■□□ 2.72
MRPL40-201ENST00000333130 GPATCH8Q9UKJ3 1502 aaKnown RBP32.01■■■□□ 2.71
MRPL40-201ENST00000333130 KANK4Q5T7N3 995 aaPredicted RBP31.99■■■□□ 2.71
MRPL40-201ENST00000333130 DENND4BO75064 1496 aaPredicted RBP31.98■■■□□ 2.71
MRPL40-201ENST00000333130 CFDP1Q9UEE9 299 aaPredicted RBP31.95■■■□□ 2.71
MRPL40-201ENST00000333130 RICTORQ6R327 1708 aa31.95■■■□□ 2.7
MRPL40-201ENST00000333130 SCAPERQ9BY12 1400 aa31.93■■■□□ 2.7
MRPL40-201ENST00000333130 ABCC1P33527 1531 aa31.91■■■□□ 2.7
MRPL40-201ENST00000333130 ZNF777Q9ULD5 760 aaPredicted RBP31.9■■■□□ 2.7
MRPL40-201ENST00000333130 PLEKHH2Q8IVE3 1493 aa31.89■■■□□ 2.7
MRPL40-201ENST00000333130 FRMPD1Q5SYB0 1578 aa31.89■■■□□ 2.7
MRPL40-201ENST00000333130 SAMD9LQ8IVG5 1584 aa31.89■■■□□ 2.7
MRPL40-201ENST00000333130 RAPGEF3O95398 923 aa31.88■■■□□ 2.69
MRPL40-201ENST00000333130 POGZQ7Z3K3 1410 aa31.88■■■□□ 2.69
MRPL40-201ENST00000333130 ZNF518AQ6AHZ1 1483 aa31.86■■■□□ 2.69
MRPL40-201ENST00000333130 ZMYM4Q5VZL5 1548 aa31.83■■■□□ 2.69
MRPL40-201ENST00000333130 MYOM3Q5VTT5 1437 aa31.82■■■□□ 2.68
MRPL40-201ENST00000333130 SYCP2Q9BX26 1530 aa31.81■■■□□ 2.68
MRPL40-201ENST00000333130 KIAA1107Q9UPP5 1409 aa31.79■■■□□ 2.68
MRPL40-201ENST00000333130 MIA2Q96PC5 1412 aa31.77■■■□□ 2.68
MRPL40-201ENST00000333130 KDM5CP41229 1560 aa31.77■■■□□ 2.68
MRPL40-201ENST00000333130 MAGI2Q86UL8 1455 aa31.77■■■□□ 2.68
MRPL40-201ENST00000333130 CAMSAP2Q08AD1 1489 aa31.76■■■□□ 2.67
MRPL40-201ENST00000333130 ARHGEF40Q8TER5 1519 aa31.74■■■□□ 2.67
MRPL40-201ENST00000333130 ARHGEF12Q9NZN5 1544 aa31.74■■■□□ 2.67
MRPL40-201ENST00000333130 HECW2Q9P2P5 1572 aa31.74■■■□□ 2.67
MRPL40-201ENST00000333130 ZFYVE16Q7Z3T8 1539 aa31.73■■■□□ 2.67
MRPL40-201ENST00000333130 TRAPPC8Q9Y2L5 1435 aa31.7■■■□□ 2.67
MRPL40-201ENST00000333130 MYT1LQ9UL68 1186 aa31.69■■■□□ 2.66
MRPL40-201ENST00000333130 HNRNPMP52272 730 aaKnown RBP eCLIP31.68■■■□□ 2.66
MRPL40-201ENST00000333130 AFAP1Q8N556 730 aa31.68■■■□□ 2.66
MRPL40-201ENST00000333130 ZNF644Q9H582 1327 aaPredicted RBP31.68■■■□□ 2.66
MRPL40-201ENST00000333130 PTPN23Q9H3S7 1636 aa31.66■■■□□ 2.66
MRPL40-201ENST00000333130 FGD6Q6ZV73 1430 aa31.65■■■□□ 2.66
MRPL40-201ENST00000333130 MLH3Q9UHC1 1453 aa31.64■■■□□ 2.66
MRPL40-201ENST00000333130 ARHGEF5Q12774 1597 aa31.63■■■□□ 2.65
MRPL40-201ENST00000333130 RSPH4AQ5TD94 716 aa31.63■■■□□ 2.65
MRPL40-201ENST00000333130 CCDC141Q6ZP82 1450 aa31.63■■■□□ 2.65
MRPL40-201ENST00000333130 MBD5Q9P267 1494 aa31.61■■■□□ 2.65
MRPL40-201ENST00000333130 PPARGC1BQ86YN6 1023 aaKnown RBP31.61■■■□□ 2.65
MRPL40-201ENST00000333130 SPAG9O60271 1321 aaKnown RBP31.6■■■□□ 2.65
MRPL40-201ENST00000333130 YEATS2Q9ULM3 1422 aa31.59■■■□□ 2.65
MRPL40-201ENST00000333130 KIDINS220Q9ULH0 1771 aa31.59■■■□□ 2.65
MRPL40-201ENST00000333130 ATP7AQ04656 1500 aa31.58■■■□□ 2.65
MRPL40-201ENST00000333130 INO80Q9ULG1 1556 aaPredicted RBP31.57■■■□□ 2.64
MRPL40-201ENST00000333130 TCOF1Q13428 1488 aaKnown RBP31.56■■■□□ 2.64
MRPL40-201ENST00000333130 DIP2CQ9Y2E4 1556 aa31.55■■■□□ 2.64
MRPL40-201ENST00000333130 ATP10AO60312 1499 aa31.55■■■□□ 2.64
MRPL40-201ENST00000333130 ABCA6Q8N139 1617 aa31.55■■■□□ 2.64
MRPL40-201ENST00000333130 C9orf84Q5VXU9 1444 aa31.54■■■□□ 2.64
MRPL40-201ENST00000333130 TSPY4P0CV99 314 aa31.51■■■□□ 2.63
MRPL40-201ENST00000333130 TSPY10P0CW01 314 aa31.51■■■□□ 2.63
MRPL40-201ENST00000333130 RTEL1-TNFRSF6BF6WH68 1400 aa31.5■■■□□ 2.63
MRPL40-201ENST00000333130 ARID4BQ4LE39 1312 aaPredicted RBP31.5■■■□□ 2.63
MRPL40-201ENST00000333130 REREQ9P2R6 1566 aa31.48■■■□□ 2.63
MRPL40-201ENST00000333130 CROCC2H7BZ55 1655 aa31.48■■■□□ 2.63
MRPL40-201ENST00000333130 ADGBQ8N7X0 1667 aa31.48■■■□□ 2.63
MRPL40-201ENST00000333130 DNMT1P26358 1616 aaKnown RBP31.47■■■□□ 2.63
MRPL40-201ENST00000333130 FAM50AQ14320 339 aaKnown RBP31.45■■■□□ 2.63
MRPL40-201ENST00000333130 MAST1Q9Y2H9 1570 aa31.45■■■□□ 2.63
MRPL40-201ENST00000333130 RRBP1Q9P2E9 1410 aaKnown RBP31.43■■■□□ 2.62
MRPL40-201ENST00000333130 SHANK2Q9UPX8 1470 aa31.42■■■□□ 2.62
MRPL40-201ENST00000333130 BCORL1Q5H9F3 1711 aa31.4■■■□□ 2.62
MRPL40-201ENST00000333130 DAPK1P53355 1430 aa31.4■■■□□ 2.62
MRPL40-201ENST00000333130 SIGLEC1Q9BZZ2 1709 aa31.38■■■□□ 2.61
MRPL40-201ENST00000333130 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.38■■■□□ 2.613e-7■■■□□ 14.6
MRPL40-201ENST00000333130 A2MP01023 1474 aa31.37■■■□□ 2.61
MRPL40-201ENST00000333130 ABCC5O15440 1437 aa31.37■■■□□ 2.61
MRPL40-201ENST00000333130 PLXNC1O60486 1568 aa31.36■■■□□ 2.61
MRPL40-201ENST00000333130 AGLP35573 1532 aa31.36■■■□□ 2.61
MRPL40-201ENST00000333130 ADAMTSL3P82987 1691 aa31.3■■■□□ 2.6
MRPL40-201ENST00000333130 KDM4FA0A1W2PPD8 638 aa31.28■■■□□ 2.6
MRPL40-201ENST00000333130 FER1L4A9Z1Z3 1794 aa31.27■■■□□ 2.6
MRPL40-201ENST00000333130 DHX29Q7Z478 1369 aaKnown RBP31.26■■■□□ 2.6
MRPL40-201ENST00000333130 ANKRD30AQ9BXX3 1397 aa31.26■■■□□ 2.59
MRPL40-201ENST00000333130 MLECQ14165 292 aa31.25■■■□□ 2.59
MRPL40-201ENST00000333130 MADDQ8WXG6 1647 aa31.25■■■□□ 2.59
MRPL40-201ENST00000333130 DUOX2Q9NRD8 1548 aa31.24■■■□□ 2.59
MRPL40-201ENST00000333130 AEBP2Q6ZN18 517 aaPredicted RBP31.21■■■□□ 2.59
MRPL40-201ENST00000333130 KIF15Q9NS87 1388 aa31.21■■■□□ 2.59
MRPL40-201ENST00000333130 ADGRL2O95490 1459 aa31.2■■■□□ 2.59
MRPL40-201ENST00000333130 CHIC2Q9UKJ5 165 aa31.2■■■□□ 2.59
MRPL40-201ENST00000333130 RIMS1Q86UR5 1692 aaKnown RBP31.2■■■□□ 2.58
MRPL40-201ENST00000333130 EIF2AK4Q9P2K8 1649 aaKnown RBP31.2■■■□□ 2.58
MRPL40-201ENST00000333130 ESF1Q9H501 851 aaKnown RBP31.17■■■□□ 2.58
MRPL40-201ENST00000333130 RRP7BPQ9NSQ0 103 aa31.16■■■□□ 2.58
MRPL40-201ENST00000333130 PTPRKQ15262 1439 aa31.15■■■□□ 2.58
MRPL40-201ENST00000333130 NCOA1Q15788 1441 aa31.15■■■□□ 2.58
MRPL40-201ENST00000333130 ITGAEP38570 1179 aa31.15■■■□□ 2.58
MRPL40-201ENST00000333130 ERBINQ96RT1 1412 aa31.14■■■□□ 2.58
MRPL40-201ENST00000333130 KIF3BO15066 747 aa31.12■■■□□ 2.57
MRPL40-201ENST00000333130 ROCK1Q13464 1354 aa31.11■■■□□ 2.57
MRPL40-201ENST00000333130 CNTLNQ9NXG0 1405 aa31.1■■■□□ 2.57
MRPL40-201ENST00000333130 GGT6Q6P531 493 aa31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms