RNA–Protein interactions for RNA: ENST00000332598.6

TMED9-201, Transcript of transmembrane p24 trafficking protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED9, Length 1,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED9-201ENST00000332598 RICTORQ6R327 1708 aa26.89■■□□□ 1.9
TMED9-201ENST00000332598 VPS8Q8N3P4 1428 aa26.89■■□□□ 1.9
TMED9-201ENST00000332598 POGZQ7Z3K3 1410 aa26.88■■□□□ 1.89
TMED9-201ENST00000332598 AFAP1Q8N556 730 aa26.85■■□□□ 1.89
TMED9-201ENST00000332598 CDC42BPBQ9Y5S2 1711 aa26.85■■□□□ 1.89
TMED9-201ENST00000332598 GPATCH8Q9UKJ3 1502 aaKnown RBP26.83■■□□□ 1.89
TMED9-201ENST00000332598 PREX2Q70Z35 1606 aa26.83■■□□□ 1.89
TMED9-201ENST00000332598 YEATS2Q9ULM3 1422 aa26.83■■□□□ 1.89
TMED9-201ENST00000332598 ZNF777Q9ULD5 760 aaPredicted RBP26.82■■□□□ 1.88
TMED9-201ENST00000332598 ZMYM4Q5VZL5 1548 aa26.82■■□□□ 1.88
TMED9-201ENST00000332598 CCNB3Q8WWL7 1395 aa26.8■■□□□ 1.88
TMED9-201ENST00000332598 ARID4BQ4LE39 1312 aaPredicted RBP26.79■■□□□ 1.88
TMED9-201ENST00000332598 CFDP1Q9UEE9 299 aaPredicted RBP26.79■■□□□ 1.88
TMED9-201ENST00000332598 MAGI2Q86UL8 1455 aa26.79■■□□□ 1.88
TMED9-201ENST00000332598 ARHGEF40Q8TER5 1519 aa26.78■■□□□ 1.88
TMED9-201ENST00000332598 ARHGEF12Q9NZN5 1544 aa26.78■■□□□ 1.88
TMED9-201ENST00000332598 CDC42BPAQ5VT25 1732 aa26.78■■□□□ 1.88
TMED9-201ENST00000332598 EHBP1L1Q8N3D4 1523 aa26.78■■□□□ 1.88
TMED9-201ENST00000332598 ZNF518AQ6AHZ1 1483 aa26.77■■□□□ 1.88
TMED9-201ENST00000332598 ZFYVE16Q7Z3T8 1539 aa26.77■■□□□ 1.88
TMED9-201ENST00000332598 TRAPPC8Q9Y2L5 1435 aa26.75■■□□□ 1.87
TMED9-201ENST00000332598 TIAM1Q13009 1591 aa26.74■■□□□ 1.87
TMED9-201ENST00000332598 ABCC1P33527 1531 aa26.74■■□□□ 1.87
TMED9-201ENST00000332598 MYT1LQ9UL68 1186 aa26.73■■□□□ 1.87
TMED9-201ENST00000332598 HNRNPMP52272 730 aaKnown RBP eCLIP26.72■■□□□ 1.87
TMED9-201ENST00000332598 KANK4Q5T7N3 995 aaPredicted RBP26.71■■□□□ 1.87
TMED9-201ENST00000332598 KDM5CP41229 1560 aa26.7■■□□□ 1.86
TMED9-201ENST00000332598 SAMD9LQ8IVG5 1584 aa26.7■■□□□ 1.86
TMED9-201ENST00000332598 ZNF644Q9H582 1327 aaPredicted RBP26.69■■□□□ 1.86
TMED9-201ENST00000332598 NCOA2Q15596 1464 aa26.68■■□□□ 1.86
TMED9-201ENST00000332598 LRRC9Q6ZRR7 1453 aa26.68■■□□□ 1.86
TMED9-201ENST00000332598 ATP10AO60312 1499 aa26.68■■□□□ 1.86
TMED9-201ENST00000332598 SYCP2Q9BX26 1530 aa26.65■■□□□ 1.86
TMED9-201ENST00000332598 MLH3Q9UHC1 1453 aa26.65■■□□□ 1.86
TMED9-201ENST00000332598 KIAA1107Q9UPP5 1409 aa26.64■■□□□ 1.86
TMED9-201ENST00000332598 ITSN2Q9NZM3 1697 aa26.64■■□□□ 1.86
TMED9-201ENST00000332598 MAP3K1Q13233 1512 aa26.64■■□□□ 1.85
TMED9-201ENST00000332598 SIGLEC1Q9BZZ2 1709 aa26.64■■□□□ 1.85
TMED9-201ENST00000332598 MLECQ14165 292 aa26.62■■□□□ 1.85
TMED9-201ENST00000332598 ADAMTSL3P82987 1691 aa26.62■■□□□ 1.85
TMED9-201ENST00000332598 C9orf84Q5VXU9 1444 aa26.62■■□□□ 1.85
TMED9-201ENST00000332598 BCORL1Q5H9F3 1711 aa26.62■■□□□ 1.85
TMED9-201ENST00000332598 PLEKHH2Q8IVE3 1493 aa26.62■■□□□ 1.85
TMED9-201ENST00000332598 HECW2Q9P2P5 1572 aa26.61■■□□□ 1.85
TMED9-201ENST00000332598 SUPT6HQ7KZ85 1726 aaKnown RBP26.61■■□□□ 1.85
TMED9-201ENST00000332598 APLP2Q06481 763 aa26.6■■□□□ 1.85
TMED9-201ENST00000332598 SPAG9O60271 1321 aaKnown RBP26.58■■□□□ 1.85
TMED9-201ENST00000332598 PTPRMP28827 1452 aa26.56■■□□□ 1.84
TMED9-201ENST00000332598 DIP2CQ9Y2E4 1556 aa26.56■■□□□ 1.84
TMED9-201ENST00000332598 MBD5Q9P267 1494 aa26.54■■□□□ 1.84
TMED9-201ENST00000332598 ABCA6Q8N139 1617 aa26.54■■□□□ 1.84
TMED9-201ENST00000332598 MADDQ8WXG6 1647 aa26.54■■□□□ 1.84
TMED9-201ENST00000332598 KIDINS220Q9ULH0 1771 aa26.53■■□□□ 1.84
TMED9-201ENST00000332598 CAMSAP2Q08AD1 1489 aa26.48■■□□□ 1.83
TMED9-201ENST00000332598 REREQ9P2R6 1566 aa26.47■■□□□ 1.83
TMED9-201ENST00000332598 PLPPR3Q6T4P5 718 aa26.46■■□□□ 1.83
TMED9-201ENST00000332598 ATP7AQ04656 1500 aa26.46■■□□□ 1.83
TMED9-201ENST00000332598 MYOM3Q5VTT5 1437 aa26.44■■□□□ 1.82
TMED9-201ENST00000332598 RIMS1Q86UR5 1692 aaKnown RBP26.43■■□□□ 1.82
TMED9-201ENST00000332598 RSPH4AQ5TD94 716 aa26.42■■□□□ 1.82
TMED9-201ENST00000332598 INO80Q9ULG1 1556 aaPredicted RBP26.42■■□□□ 1.82
TMED9-201ENST00000332598 AGLP35573 1532 aa26.42■■□□□ 1.82
TMED9-201ENST00000332598 CCDC141Q6ZP82 1450 aa26.41■■□□□ 1.82
TMED9-201ENST00000332598 MIA2Q96PC5 1412 aa26.4■■□□□ 1.82
TMED9-201ENST00000332598 RTEL1-TNFRSF6BF6WH68 1400 aa26.39■■□□□ 1.81
TMED9-201ENST00000332598 A2MP01023 1474 aa26.38■■□□□ 1.81
TMED9-201ENST00000332598 CEBPAP49715 358 aaPredicted RBP26.36■■□□□ 1.81
TMED9-201ENST00000332598 TSPY4P0CV99 314 aa26.36■■□□□ 1.81
TMED9-201ENST00000332598 TSPY10P0CW01 314 aa26.36■■□□□ 1.81
TMED9-201ENST00000332598 FER1L4A9Z1Z3 1794 aa26.35■■□□□ 1.81
TMED9-201ENST00000332598 ARHGEF5Q12774 1597 aa26.32■■□□□ 1.8
TMED9-201ENST00000332598 ESF1Q9H501 851 aaKnown RBP26.32■■□□□ 1.8
TMED9-201ENST00000332598 PLXNC1O60486 1568 aa26.3■■□□□ 1.8
TMED9-201ENST00000332598 GGT6Q6P531 493 aa26.3■■□□□ 1.8
TMED9-201ENST00000332598 DHX29Q7Z478 1369 aaKnown RBP26.29■■□□□ 1.8
TMED9-201ENST00000332598 FGD6Q6ZV73 1430 aa26.27■■□□□ 1.8
TMED9-201ENST00000332598 ADGBQ8N7X0 1667 aa26.25■■□□□ 1.79
TMED9-201ENST00000332598 LMTK3Q96Q04 1460 aa26.24■■□□□ 1.79
TMED9-201ENST00000332598 KIF3BO15066 747 aa26.23■■□□□ 1.79
TMED9-201ENST00000332598 PTPN23Q9H3S7 1636 aa26.23■■□□□ 1.79
TMED9-201ENST00000332598 PPARGC1BQ86YN6 1023 aaKnown RBP26.22■■□□□ 1.79
TMED9-201ENST00000332598 CNTLNQ9NXG0 1405 aa26.21■■□□□ 1.79
TMED9-201ENST00000332598 ABCC5O15440 1437 aa26.2■■□□□ 1.79
TMED9-201ENST00000332598 HSPA2P54652 639 aa26.19■■□□□ 1.78
TMED9-201ENST00000332598 TCOF1Q13428 1488 aaKnown RBP26.19■■□□□ 1.78
TMED9-201ENST00000332598 ZMYM3Q14202 1370 aa26.19■■□□□ 1.78
TMED9-201ENST00000332598 MAST1Q9Y2H9 1570 aa26.18■■□□□ 1.78
TMED9-201ENST00000332598 PPP6R1Q9UPN7 881 aa26.17■■□□□ 1.78
TMED9-201ENST00000332598 DAPK1P53355 1430 aa26.15■■□□□ 1.78
TMED9-201ENST00000332598 FAM50AQ14320 339 aaKnown RBP26.15■■□□□ 1.78
TMED9-201ENST00000332598 C3P01024 1663 aa26.14■■□□□ 1.78
TMED9-201ENST00000332598 RRP7BPQ9NSQ0 103 aa26.13■■□□□ 1.77
TMED9-201ENST00000332598 CHIC2Q9UKJ5 165 aa26.12■■□□□ 1.77
TMED9-201ENST00000332598 ILDR1Q86SU0 546 aaPredicted RBP26.11■■□□□ 1.77
TMED9-201ENST00000332598 SHANK2Q9UPX8 1470 aa26.1■■□□□ 1.77
TMED9-201ENST00000332598 DNMT1P26358 1616 aaKnown RBP26.08■■□□□ 1.77
TMED9-201ENST00000332598 CLTCQ00610 1675 aaKnown RBP26.08■■□□□ 1.77
TMED9-201ENST00000332598 KIF15Q9NS87 1388 aa26.08■■□□□ 1.77
TMED9-201ENST00000332598 UHRF1BP1Q6BDS2 1440 aa26.07■■□□□ 1.76
TMED9-201ENST00000332598 WASHC2CQ9Y4E1 1318 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms