RNA–Protein interactions for RNA: ENST00000332440.3

LINC00313-201, long intergenic non-protein coding RNA 313, humanhuman

TSL 1 (best) BASIC

Gene LINC00313, Length 579 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00313-201ENST00000332440 PTPRMP28827 1452 aa26.76■■□□□ 1.87
LINC00313-201ENST00000332440 CCDC18Q5T9S5 1454 aa26.75■■□□□ 1.87
LINC00313-201ENST00000332440 MAGI2Q86UL8 1455 aa26.75■■□□□ 1.87
LINC00313-201ENST00000332440 CDC42BPBQ9Y5S2 1711 aa26.75■■□□□ 1.87
LINC00313-201ENST00000332440 FYCO1Q9BQS8 1478 aa26.74■■□□□ 1.87
LINC00313-201ENST00000332440 SCAPERQ9BY12 1400 aa26.73■■□□□ 1.87
LINC00313-201ENST00000332440 PREX2Q70Z35 1606 aa26.72■■□□□ 1.87
LINC00313-201ENST00000332440 KDM5CP41229 1560 aa26.71■■□□□ 1.87
LINC00313-201ENST00000332440 ATP1B4Q9UN42 357 aaPredicted RBP26.7■■□□□ 1.86
LINC00313-201ENST00000332440 CLIP1P30622 1438 aa26.7■■□□□ 1.86
LINC00313-201ENST00000332440 CDK11AQ9UQ88 783 aaPredicted RBP26.69■■□□□ 1.86
LINC00313-201ENST00000332440 ARHGAP5Q13017 1502 aa26.66■■□□□ 1.86
LINC00313-201ENST00000332440 RIMS1Q86UR5 1692 aaKnown RBP26.65■■□□□ 1.86
LINC00313-201ENST00000332440 CDC42BPAQ5VT25 1732 aa26.65■■□□□ 1.86
LINC00313-201ENST00000332440 ABCC1P33527 1531 aa26.64■■□□□ 1.85
LINC00313-201ENST00000332440 EFCAB2Q5VUJ9 269 aa26.63■■□□□ 1.85
LINC00313-201ENST00000332440 ZNF518AQ6AHZ1 1483 aa26.62■■□□□ 1.85
LINC00313-201ENST00000332440 ARHGEF12Q9NZN5 1544 aa26.62■■□□□ 1.85
LINC00313-201ENST00000332440 ITSN2Q9NZM3 1697 aa26.6■■□□□ 1.85
LINC00313-201ENST00000332440 ATP10AO60312 1499 aa26.58■■□□□ 1.85
LINC00313-201ENST00000332440 DIP2CQ9Y2E4 1556 aa26.58■■□□□ 1.85
LINC00313-201ENST00000332440 C9orf84Q5VXU9 1444 aa26.56■■□□□ 1.84
LINC00313-201ENST00000332440 REREQ9P2R6 1566 aa26.56■■□□□ 1.84
LINC00313-201ENST00000332440 ABCA6Q8N139 1617 aa26.56■■□□□ 1.84
LINC00313-201ENST00000332440 ARID4BQ4LE39 1312 aaPredicted RBP26.56■■□□□ 1.84
LINC00313-201ENST00000332440 LMTK3Q96Q04 1460 aa26.55■■□□□ 1.84
LINC00313-201ENST00000332440 FER1L4A9Z1Z3 1794 aa26.55■■□□□ 1.84
LINC00313-201ENST00000332440 MLH3Q9UHC1 1453 aa26.53■■□□□ 1.84
LINC00313-201ENST00000332440 SAMD9LQ8IVG5 1584 aa26.52■■□□□ 1.84
LINC00313-201ENST00000332440 TRAPPC8Q9Y2L5 1435 aa26.52■■□□□ 1.84
LINC00313-201ENST00000332440 AFAP1Q8N556 730 aa26.51■■□□□ 1.83
LINC00313-201ENST00000332440 GPATCH8Q9UKJ3 1502 aaKnown RBP26.5■■□□□ 1.83
LINC00313-201ENST00000332440 KIDINS220Q9ULH0 1771 aa26.48■■□□□ 1.83
LINC00313-201ENST00000332440 CEP162Q5TB80 1403 aa26.47■■□□□ 1.83
LINC00313-201ENST00000332440 SYCP2Q9BX26 1530 aa26.43■■□□□ 1.82
LINC00313-201ENST00000332440 AGLP35573 1532 aa26.42■■□□□ 1.82
LINC00313-201ENST00000332440 TIAM1Q13009 1591 aa26.4■■□□□ 1.82
LINC00313-201ENST00000332440 EHBP1L1Q8N3D4 1523 aa26.39■■□□□ 1.81
LINC00313-201ENST00000332440 INO80Q9ULG1 1556 aaPredicted RBP26.37■■□□□ 1.81
LINC00313-201ENST00000332440 MLECQ14165 292 aa26.36■■□□□ 1.81
LINC00313-201ENST00000332440 KIAA1107Q9UPP5 1409 aa26.35■■□□□ 1.81
LINC00313-201ENST00000332440 ILDR1Q86SU0 546 aaPredicted RBP26.33■■□□□ 1.81
LINC00313-201ENST00000332440 PLXNC1O60486 1568 aa26.32■■□□□ 1.8
LINC00313-201ENST00000332440 PREX1Q8TCU6 1659 aa26.31■■□□□ 1.8
LINC00313-201ENST00000332440 MTUS2Q5JR59 1369 aa26.31■■□□□ 1.8
LINC00313-201ENST00000332440 ATP7AQ04656 1500 aa26.29■■□□□ 1.8
LINC00313-201ENST00000332440 C3P01024 1663 aa26.29■■□□□ 1.8
LINC00313-201ENST00000332440 CCNB3Q8WWL7 1395 aa26.29■■□□□ 1.8
LINC00313-201ENST00000332440 PLEKHH2Q8IVE3 1493 aa26.29■■□□□ 1.8
LINC00313-201ENST00000332440 MBD5Q9P267 1494 aa26.27■■□□□ 1.8
LINC00313-201ENST00000332440 HNRNPMP52272 730 aaKnown RBP eCLIP26.23■■□□□ 1.79
LINC00313-201ENST00000332440 HSPA2P54652 639 aa26.23■■□□□ 1.79
LINC00313-201ENST00000332440 CFDP1Q9UEE9 299 aaPredicted RBP26.23■■□□□ 1.79
LINC00313-201ENST00000332440 ZNF777Q9ULD5 760 aaPredicted RBP26.23■■□□□ 1.79
LINC00313-201ENST00000332440 CEBPAP49715 358 aaPredicted RBP26.22■■□□□ 1.79
LINC00313-201ENST00000332440 NCOA2Q15596 1464 aa26.21■■□□□ 1.79
LINC00313-201ENST00000332440 SUPT6HQ7KZ85 1726 aaKnown RBP26.2■■□□□ 1.79
LINC00313-201ENST00000332440 VPS8Q8N3P4 1428 aa26.2■■□□□ 1.78
LINC00313-201ENST00000332440 ZNF644Q9H582 1327 aaPredicted RBP26.19■■□□□ 1.78
LINC00313-201ENST00000332440 MROH2AA6NES4 1674 aa26.19■■□□□ 1.78
LINC00313-201ENST00000332440 PLPPR3Q6T4P5 718 aa26.19■■□□□ 1.78
LINC00313-201ENST00000332440 SPAG9O60271 1321 aaKnown RBP26.18■■□□□ 1.78
LINC00313-201ENST00000332440 LOC105371045A0A1W2PR82 267 aa26.17■■□□□ 1.78
LINC00313-201ENST00000332440 ADGBQ8N7X0 1667 aa26.16■■□□□ 1.78
LINC00313-201ENST00000332440 STRCQ7RTU9 1775 aa26.16■■□□□ 1.78
LINC00313-201ENST00000332440 MYT1LQ9UL68 1186 aa26.16■■□□□ 1.78
LINC00313-201ENST00000332440 A2MP01023 1474 aa26.15■■□□□ 1.78
LINC00313-201ENST00000332440 SETD1BQ9UPS6 1966 aaKnown RBP26.15■■□□□ 1.78
LINC00313-201ENST00000332440 CNTLNQ9NXG0 1405 aa26.14■■□□□ 1.77
LINC00313-201ENST00000332440 CAMSAP2Q08AD1 1489 aa26.12■■□□□ 1.77
LINC00313-201ENST00000332440 LRRC9Q6ZRR7 1453 aa26.12■■□□□ 1.77
LINC00313-201ENST00000332440 MAP3K1Q13233 1512 aa26.11■■□□□ 1.77
LINC00313-201ENST00000332440 RTEL1-TNFRSF6BF6WH68 1400 aa26.1■■□□□ 1.77
LINC00313-201ENST00000332440 UHRF1BP1Q6BDS2 1440 aa26.09■■□□□ 1.77
LINC00313-201ENST00000332440 CLTCQ00610 1675 aaKnown RBP26.09■■□□□ 1.77
LINC00313-201ENST00000332440 ARHGEF5Q12774 1597 aa26.07■■□□□ 1.76
LINC00313-201ENST00000332440 CCDC141Q6ZP82 1450 aa26.07■■□□□ 1.76
LINC00313-201ENST00000332440 NPATQ14207 1427 aa26.05■■□□□ 1.76
LINC00313-201ENST00000332440 ZMYM3Q14202 1370 aa26■■□□□ 1.75
LINC00313-201ENST00000332440 FBXO41Q8TF61 875 aa26■■□□□ 1.75
LINC00313-201ENST00000332440 ZNF142P52746 1687 aaPredicted RBP25.99■■□□□ 1.75
LINC00313-201ENST00000332440 MYO3AQ8NEV4 1616 aa25.99■■□□□ 1.75
LINC00313-201ENST00000332440 DHX29Q7Z478 1369 aaKnown RBP25.98■■□□□ 1.75
LINC00313-201ENST00000332440 KANK4Q5T7N3 995 aaPredicted RBP25.98■■□□□ 1.75
LINC00313-201ENST00000332440 PTPRKQ15262 1439 aa25.97■■□□□ 1.75
LINC00313-201ENST00000332440 MAST1Q9Y2H9 1570 aa25.97■■□□□ 1.75
LINC00313-201ENST00000332440 NCOA1Q15788 1441 aa25.95■■□□□ 1.74
LINC00313-201ENST00000332440 FAM135AQ9P2D6 1515 aa25.93■■□□□ 1.74
LINC00313-201ENST00000332440 ESF1Q9H501 851 aaKnown RBP25.92■■□□□ 1.74
LINC00313-201ENST00000332440 MYOM3Q5VTT5 1437 aa25.91■■□□□ 1.74
LINC00313-201ENST00000332440 PTPRTO14522 1441 aa25.9■■□□□ 1.74
LINC00313-201ENST00000332440 MIA2Q96PC5 1412 aa25.9■■□□□ 1.74
LINC00313-201ENST00000332440 CEP170BQ9Y4F5 1589 aaPredicted RBP25.9■■□□□ 1.74
LINC00313-201ENST00000332440 CAMSAP1Q5T5Y3 1602 aa25.89■■□□□ 1.74
LINC00313-201ENST00000332440 PPP6R1Q9UPN7 881 aa25.89■■□□□ 1.74
LINC00313-201ENST00000332440 RNF17Q9BXT8 1623 aaKnown RBP25.88■■□□□ 1.73
LINC00313-201ENST00000332440 RSPH4AQ5TD94 716 aa25.88■■□□□ 1.73
LINC00313-201ENST00000332440 KDM5DQ9BY66 1539 aa25.88■■□□□ 1.73
LINC00313-201ENST00000332440 GGT6Q6P531 493 aa25.87■■□□□ 1.73
LINC00313-201ENST00000332440 LTBP4Q8N2S1 1624 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms