RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 FAM163AQ96GL9 167 aaPredicted RBP4.44□□□□□ -1.7
CCDC144A-201ENST00000328495 DOK7Q18PE1 504 aa4.43□□□□□ -1.7
CCDC144A-201ENST00000328495 C2orf72A6NCS6 295 aa4.42□□□□□ -1.7
CCDC144A-201ENST00000328495 KIF3CO14782 793 aa4.42□□□□□ -1.7
CCDC144A-201ENST00000328495 RIMBP2O15034 1052 aa4.42□□□□□ -1.7
CCDC144A-201ENST00000328495 PAXIP1Q6ZW49 1069 aaPredicted RBP4.42□□□□□ -1.7
CCDC144A-201ENST00000328495 CFAP44Q96MT7 982 aa4.42□□□□□ -1.7
CCDC144A-201ENST00000328495 ZNF710Q8N1W2 664 aa4.41□□□□□ -1.7
CCDC144A-201ENST00000328495 GPHNQ9NQX3 736 aaPredicted RBP4.4□□□□□ -1.7
CCDC144A-201ENST00000328495 ST18O60284 1047 aa4.4□□□□□ -1.7
CCDC144A-201ENST00000328495 HOXB3P14651 431 aaPredicted RBP4.4□□□□□ -1.7
CCDC144A-201ENST00000328495 PDE4AP27815 886 aa4.39□□□□□ -1.71
CCDC144A-201ENST00000328495 CRISPLD2Q9H0B8 497 aa4.39□□□□□ -1.71
CCDC144A-201ENST00000328495 LCE2DQ5TA82 110 aaPredicted RBP4.39□□□□□ -1.71
CCDC144A-201ENST00000328495 ZSWIM6Q9HCJ5 1215 aa4.39□□□□□ -1.71
CCDC144A-201ENST00000328495 FOXK1P85037 733 aa4.39□□□□□ -1.71
CCDC144A-201ENST00000328495 POTEMA6NI47 508 aa4.37□□□□□ -1.71
CCDC144A-201ENST00000328495 POTEGQ6S5H5 508 aa4.37□□□□□ -1.71
CCDC144A-201ENST00000328495 PLPP6Q8IY26 295 aa4.37□□□□□ -1.71
CCDC144A-201ENST00000328495 DSG2Q14126 1118 aa4.37□□□□□ -1.71
CCDC144A-201ENST00000328495 NCKAP5LQ9HCH0 1330 aa4.37□□□□□ -1.71
CCDC144A-201ENST00000328495 PPP1R15BQ5SWA1 713 aa4.37□□□□□ -1.71
CCDC144A-201ENST00000328495 HOXB1P14653 301 aaPredicted RBP4.36□□□□□ -1.71
CCDC144A-201ENST00000328495 DDX27Q96GQ7 796 aaKnown RBP4.36□□□□□ -1.71
CCDC144A-201ENST00000328495 LARP6Q9BRS8 491 aaKnown RBP4.36□□□□□ -1.71
CCDC144A-201ENST00000328495 SLC34A2O95436 690 aa4.36□□□□□ -1.71
CCDC144A-201ENST00000328495 EMP3P54852 163 aa4.36□□□□□ -1.71
CCDC144A-201ENST00000328495 CADPS2Q86UW7 1296 aa4.36□□□□□ -1.71
CCDC144A-201ENST00000328495 PLSCR2Q9NRY7 297 aa4.36□□□□□ -1.71
CCDC144A-201ENST00000328495 MFSD10Q14728 455 aa4.35□□□□□ -1.71
CCDC144A-201ENST00000328495 MARVELD3Q96A59 401 aa4.35□□□□□ -1.71
CCDC144A-201ENST00000328495 GPR153Q6NV75 609 aa4.34□□□□□ -1.71
CCDC144A-201ENST00000328495 ARSIQ5FYB1 569 aa4.34□□□□□ -1.72
CCDC144A-201ENST00000328495 PCDHGA4Q9Y5G9 962 aa4.34□□□□□ -1.72
CCDC144A-201ENST00000328495 TBC1D12O60347 775 aa4.33□□□□□ -1.72
CCDC144A-201ENST00000328495 PLCB2Q00722 1185 aa4.33□□□□□ -1.72
CCDC144A-201ENST00000328495 PTCD2Q8WV60 388 aaKnown RBP4.33□□□□□ -1.72
CCDC144A-201ENST00000328495 ERBB3P21860 1342 aa4.32□□□□□ -1.72
CCDC144A-201ENST00000328495 FAM205CA6NFA0 338 aa4.32□□□□□ -1.72
CCDC144A-201ENST00000328495 PCDH10Q9P2E7 1040 aa4.32□□□□□ -1.72
CCDC144A-201ENST00000328495 ERCC6L2Q5T890 1561 aa4.32□□□□□ -1.72
CCDC144A-201ENST00000328495 ZNF316A6NFI3 1004 aaPredicted RBP4.31□□□□□ -1.72
CCDC144A-201ENST00000328495 NUDT7P0C024 238 aa4.31□□□□□ -1.72
CCDC144A-201ENST00000328495 UPF1Q92900 1129 aaKnown RBP eCLIP4.31□□□□□ -1.72
CCDC144A-201ENST00000328495 WDR70Q9NW82 654 aa4.31□□□□□ -1.72
CCDC144A-201ENST00000328495 OXER1Q8TDS5 423 aa4.31□□□□□ -1.72
CCDC144A-201ENST00000328495 KHSRPQ92945 711 aaKnown RBP eCLIP4.31□□□□□ -1.72
CCDC144A-201ENST00000328495 HS3ST6Q96QI5 342 aa4.31□□□□□ -1.72
CCDC144A-201ENST00000328495 CUX2O14529 1486 aa4.31□□□□□ -1.72
CCDC144A-201ENST00000328495 TSHZ2Q9NRE2 1034 aa4.31□□□□□ -1.72
CCDC144A-201ENST00000328495 VARS2Q5ST30 1063 aaKnown RBP4.3□□□□□ -1.72
CCDC144A-201ENST00000328495 CDAN1Q8IWY9 1227 aa4.3□□□□□ -1.72
CCDC144A-201ENST00000328495 IGSF5Q9NSI5 407 aa4.3□□□□□ -1.72
CCDC144A-201ENST00000328495 CAMK2BQ13554 666 aa4.29□□□□□ -1.72
CCDC144A-201ENST00000328495 LMTK3Q96Q04 1460 aa4.29□□□□□ -1.72
CCDC144A-201ENST00000328495 PSDA5PKW4 1024 aaPredicted RBP4.29□□□□□ -1.72
CCDC144A-201ENST00000328495 MAP3K9P80192 1104 aa4.29□□□□□ -1.72
CCDC144A-201ENST00000328495 EMILIN3Q9NT22 766 aa4.28□□□□□ -1.72
CCDC144A-201ENST00000328495 LHX6Q9UPM6 363 aa4.28□□□□□ -1.72
CCDC144A-201ENST00000328495 HAP1P54257 671 aaPredicted RBP4.28□□□□□ -1.72
CCDC144A-201ENST00000328495 E2F4Q16254 413 aa4.28□□□□□ -1.72
CCDC144A-201ENST00000328495 KDM4FA0A1W2PPD8 638 aa4.27□□□□□ -1.73
CCDC144A-201ENST00000328495 POTEB3A0JP26 581 aa4.27□□□□□ -1.73
CCDC144A-201ENST00000328495 POTEBQ6S5H4 581 aa4.27□□□□□ -1.73
CCDC144A-201ENST00000328495 EVI5O60447 810 aa4.27□□□□□ -1.73
CCDC144A-201ENST00000328495 ZNF687Q8N1G0 1237 aa4.26□□□□□ -1.73
CCDC144A-201ENST00000328495 PPP4R3BQ5MIZ7 849 aa4.26□□□□□ -1.73
CCDC144A-201ENST00000328495 DPYSL4O14531 572 aa4.25□□□□□ -1.73
CCDC144A-201ENST00000328495 PBX2P40425 430 aa4.24□□□□□ -1.73
CCDC144A-201ENST00000328495 ANO8Q9HCE9 1232 aaPredicted RBP4.24□□□□□ -1.73
CCDC144A-201ENST00000328495 P3H3Q8IVL6 736 aa4.24□□□□□ -1.73
CCDC144A-201ENST00000328495 ZNF454Q8N9F8 522 aa4.24□□□□□ -1.73
CCDC144A-201ENST00000328495 ARIH1Q9Y4X5 557 aaPredicted RBP4.24□□□□□ -1.73
CCDC144A-201ENST00000328495 SPDYE16A6NNV3 312 aaPredicted RBP4.23□□□□□ -1.73
CCDC144A-201ENST00000328495 JPH4Q96JJ6 628 aa4.23□□□□□ -1.73
CCDC144A-201ENST00000328495 KCNH8Q96L42 1107 aa4.23□□□□□ -1.73
CCDC144A-201ENST00000328495 PDIA6Q15084 440 aa4.23□□□□□ -1.73
CCDC144A-201ENST00000328495 KRTAP3-3Q9BYR6 98 aa4.23□□□□□ -1.73
CCDC144A-201ENST00000328495 KRTAP3-2Q9BYR7 98 aa4.23□□□□□ -1.73
CCDC144A-201ENST00000328495 FOSBP53539 338 aa4.23□□□□□ -1.73
CCDC144A-201ENST00000328495 KCNV2Q8TDN2 545 aa4.21□□□□□ -1.74
CCDC144A-201ENST00000328495 ARHGEF1Q92888 912 aaKnown RBP4.21□□□□□ -1.74
CCDC144A-201ENST00000328495 ZDHHC16Q969W1 377 aa4.21□□□□□ -1.74
CCDC144A-201ENST00000328495 ARHGAP33O14559 1287 aa4.21□□□□□ -1.74
CCDC144A-201ENST00000328495 PHF14O94880 888 aa4.21□□□□□ -1.74
CCDC144A-201ENST00000328495 FBXW7Q969H0 707 aa4.21□□□□□ -1.74
CCDC144A-201ENST00000328495 VSIG10Q8N0Z9 540 aa4.2□□□□□ -1.74
CCDC144A-201ENST00000328495 EPAS1Q99814 870 aa4.2□□□□□ -1.74
CCDC144A-201ENST00000328495 BCL2L12Q9HB09 334 aa4.2□□□□□ -1.74
CCDC144A-201ENST00000328495 PTGER2P43116 358 aa4.2□□□□□ -1.74
CCDC144A-201ENST00000328495 LSM11P83369 360 aaKnown RBP eCLIP4.2□□□□□ -1.74
CCDC144A-201ENST00000328495 TYW1BQ6NUM6 668 aa4.2□□□□□ -1.74
CCDC144A-201ENST00000328495 KCNK17Q96T54 332 aa4.2□□□□□ -1.74
CCDC144A-201ENST00000328495 AXIN2Q9Y2T1 843 aa4.2□□□□□ -1.74
CCDC144A-201ENST00000328495 PCDHGA10Q9Y5H3 936 aa4.2□□□□□ -1.74
CCDC144A-201ENST00000328495 PTPREP23469 700 aa4.19□□□□□ -1.74
CCDC144A-201ENST00000328495 POTEEQ6S8J3 1075 aa4.19□□□□□ -1.74
CCDC144A-201ENST00000328495 DDX12PQ92771 950 aa4.19□□□□□ -1.74
CCDC144A-201ENST00000328495 ANKRD13DQ6ZTN6 518 aa4.19□□□□□ -1.74
CCDC144A-201ENST00000328495 ADAM33Q9BZ11 813 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms