RNA–Protein interactions for RNA: ENST00000327956.6

SCN5A-201, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-201ENST00000327956 TROQ12816 1431 aaPredicted RBP28.3■■■□□ 2.12
SCN5A-201ENST00000327956 SCAPERQ9BY12 1400 aa28.3■■■□□ 2.12
SCN5A-201ENST00000327956 MADDQ8WXG6 1647 aa28.27■■■□□ 2.12
SCN5A-201ENST00000327956 CCDC18Q5T9S5 1454 aa28.27■■■□□ 2.12
SCN5A-201ENST00000327956 ARHGAP5Q13017 1502 aa28.25■■■□□ 2.11
SCN5A-201ENST00000327956 CASKIN1Q8WXD9 1431 aa28.22■■■□□ 2.11
SCN5A-201ENST00000327956 PCF11O94913 1555 aaKnown RBP28.2■■■□□ 2.11
SCN5A-201ENST00000327956 YEATS2Q9ULM3 1422 aa28.2■■■□□ 2.11
SCN5A-201ENST00000327956 RIMS1Q86UR5 1692 aaKnown RBP28.19■■■□□ 2.1
SCN5A-201ENST00000327956 MYT1LQ9UL68 1186 aa28.18■■■□□ 2.1
SCN5A-201ENST00000327956 ZNF518AQ6AHZ1 1483 aa28.18■■■□□ 2.1
SCN5A-201ENST00000327956 LRRIQ1Q96JM4 1722 aa28.18■■■□□ 2.1
SCN5A-201ENST00000327956 FYCO1Q9BQS8 1478 aa28.15■■■□□ 2.1
SCN5A-201ENST00000327956 C9orf84Q5VXU9 1444 aa28.13■■■□□ 2.09
SCN5A-201ENST00000327956 MLECQ14165 292 aa28.13■■■□□ 2.09
SCN5A-201ENST00000327956 ATP10AO60312 1499 aa28.13■■■□□ 2.09
SCN5A-201ENST00000327956 ILDR1Q86SU0 546 aaPredicted RBP28.11■■■□□ 2.09
SCN5A-201ENST00000327956 PLPPR3Q6T4P5 718 aa28.1■■■□□ 2.09
SCN5A-201ENST00000327956 PREX2Q70Z35 1606 aa28.08■■■□□ 2.09
SCN5A-201ENST00000327956 FER1L4A9Z1Z3 1794 aa28.08■■■□□ 2.09
SCN5A-201ENST00000327956 CDC42BPBQ9Y5S2 1711 aa28.06■■■□□ 2.08
SCN5A-201ENST00000327956 KDM5CP41229 1560 aa28.05■■■□□ 2.08
SCN5A-201ENST00000327956 AFAP1Q8N556 730 aa28.04■■■□□ 2.08
SCN5A-201ENST00000327956 SIGLEC1Q9BZZ2 1709 aa28.03■■■□□ 2.08
SCN5A-201ENST00000327956 LMTK3Q96Q04 1460 aa28.02■■■□□ 2.08
SCN5A-201ENST00000327956 ABCC1P33527 1531 aa27.99■■■□□ 2.07
SCN5A-201ENST00000327956 ARHGEF12Q9NZN5 1544 aa27.97■■■□□ 2.07
SCN5A-201ENST00000327956 ITSN2Q9NZM3 1697 aa27.97■■■□□ 2.07
SCN5A-201ENST00000327956 CDC42BPAQ5VT25 1732 aa27.96■■■□□ 2.07
SCN5A-201ENST00000327956 MLH3Q9UHC1 1453 aa27.95■■■□□ 2.07
SCN5A-201ENST00000327956 ZNF777Q9ULD5 760 aaPredicted RBP27.95■■■□□ 2.06
SCN5A-201ENST00000327956 DIP2CQ9Y2E4 1556 aa27.94■■■□□ 2.06
SCN5A-201ENST00000327956 ESF1Q9H501 851 aaKnown RBP27.94■■■□□ 2.06
SCN5A-201ENST00000327956 REREQ9P2R6 1566 aa27.92■■■□□ 2.06
SCN5A-201ENST00000327956 MTUS2Q5JR59 1369 aa27.92■■■□□ 2.06
SCN5A-201ENST00000327956 TRAPPC8Q9Y2L5 1435 aa27.91■■■□□ 2.06
SCN5A-201ENST00000327956 ABCA6Q8N139 1617 aa27.9■■■□□ 2.06
SCN5A-201ENST00000327956 CCNB3Q8WWL7 1395 aa27.89■■■□□ 2.06
SCN5A-201ENST00000327956 HSPA2P54652 639 aa27.87■■■□□ 2.05
SCN5A-201ENST00000327956 CFDP1Q9UEE9 299 aaPredicted RBP27.86■■■□□ 2.05
SCN5A-201ENST00000327956 PLEKHH2Q8IVE3 1493 aa27.86■■■□□ 2.05
SCN5A-201ENST00000327956 GPATCH8Q9UKJ3 1502 aaKnown RBP27.85■■■□□ 2.05
SCN5A-201ENST00000327956 PREX1Q8TCU6 1659 aa27.84■■■□□ 2.05
SCN5A-201ENST00000327956 AGLP35573 1532 aa27.83■■■□□ 2.05
SCN5A-201ENST00000327956 SYCP2Q9BX26 1530 aa27.83■■■□□ 2.05
SCN5A-201ENST00000327956 SAMD9LQ8IVG5 1584 aa27.83■■■□□ 2.05
SCN5A-201ENST00000327956 SPAG9O60271 1321 aaKnown RBP27.82■■■□□ 2.04
SCN5A-201ENST00000327956 CEP162Q5TB80 1403 aa27.82■■■□□ 2.04
SCN5A-201ENST00000327956 FBXO41Q8TF61 875 aa27.81■■■□□ 2.04
SCN5A-201ENST00000327956 KIDINS220Q9ULH0 1771 aa27.81■■■□□ 2.04
SCN5A-201ENST00000327956 CEBPAP49715 358 aaPredicted RBP27.8■■■□□ 2.04
SCN5A-201ENST00000327956 EHBP1L1Q8N3D4 1523 aa27.79■■■□□ 2.04
SCN5A-201ENST00000327956 UHRF1BP1Q6BDS2 1440 aa27.77■■■□□ 2.04
SCN5A-201ENST00000327956 KIAA1107Q9UPP5 1409 aa27.77■■■□□ 2.04
SCN5A-201ENST00000327956 HNRNPMP52272 730 aaKnown RBP eCLIP27.77■■■□□ 2.04
SCN5A-201ENST00000327956 CNTLNQ9NXG0 1405 aa27.76■■■□□ 2.04
SCN5A-201ENST00000327956 ATP7AQ04656 1500 aa27.73■■■□□ 2.03
SCN5A-201ENST00000327956 SETD1BQ9UPS6 1966 aaKnown RBP27.73■■■□□ 2.03
SCN5A-201ENST00000327956 C3P01024 1663 aa27.7■■■□□ 2.02
SCN5A-201ENST00000327956 DMRT2Q9Y5R5 561 aa27.69■■■□□ 2.02
SCN5A-201ENST00000327956 TIAM1Q13009 1591 aa27.69■■■□□ 2.02
SCN5A-201ENST00000327956 SUPT6HQ7KZ85 1726 aaKnown RBP27.67■■■□□ 2.02
SCN5A-201ENST00000327956 INO80Q9ULG1 1556 aaPredicted RBP27.67■■■□□ 2.02
SCN5A-201ENST00000327956 A2MP01023 1474 aa27.64■■■□□ 2.02
SCN5A-201ENST00000327956 MROH2AA6NES4 1674 aa27.62■■■□□ 2.01
SCN5A-201ENST00000327956 ADGBQ8N7X0 1667 aa27.61■■■□□ 2.01
SCN5A-201ENST00000327956 PLXNC1O60486 1568 aa27.58■■■□□ 2.01
SCN5A-201ENST00000327956 ZNF644Q9H582 1327 aaPredicted RBP27.57■■■□□ 2
SCN5A-201ENST00000327956 NPATQ14207 1427 aa27.57■■■□□ 2
SCN5A-201ENST00000327956 NCOA2Q15596 1464 aa27.57■■■□□ 2
SCN5A-201ENST00000327956 GGT6Q6P531 493 aa27.56■■■□□ 2
SCN5A-201ENST00000327956 CERKQ8TCT0 537 aa27.56■■■□□ 2
SCN5A-201ENST00000327956 RTEL1-TNFRSF6BF6WH68 1400 aa27.54■■■□□ 2
SCN5A-201ENST00000327956 ZMYM3Q14202 1370 aa27.54■■■□□ 2
SCN5A-201ENST00000327956 CLTCQ00610 1675 aaKnown RBP27.53■■■□□ 2
SCN5A-201ENST00000327956 VPS8Q8N3P4 1428 aa27.53■■■□□ 2
SCN5A-201ENST00000327956 RSPH4AQ5TD94 716 aa27.53■■■□□ 2
SCN5A-201ENST00000327956 PPP6R1Q9UPN7 881 aa27.53■■■□□ 2
SCN5A-201ENST00000327956 CCDC141Q6ZP82 1450 aa27.52■■■□□ 2
SCN5A-201ENST00000327956 MBD5Q9P267 1494 aa27.52■■■□□ 2
SCN5A-201ENST00000327956 CAMSAP2Q08AD1 1489 aa27.51■■■□□ 2
SCN5A-201ENST00000327956 STRCQ7RTU9 1775 aa27.51■■□□□ 1.99
SCN5A-201ENST00000327956 LOC105371045A0A1W2PR82 267 aa27.47■■□□□ 1.99
SCN5A-201ENST00000327956 PTPRTO14522 1441 aa27.47■■□□□ 1.99
SCN5A-201ENST00000327956 DHX29Q7Z478 1369 aaKnown RBP27.46■■□□□ 1.99
SCN5A-201ENST00000327956 TSPY4P0CV99 314 aa27.45■■□□□ 1.98
SCN5A-201ENST00000327956 TSPY10P0CW01 314 aa27.45■■□□□ 1.98
SCN5A-201ENST00000327956 LRRC9Q6ZRR7 1453 aa27.44■■□□□ 1.98
SCN5A-201ENST00000327956 NCOA1Q15788 1441 aa27.42■■□□□ 1.98
SCN5A-201ENST00000327956 CAMSAP1Q5T5Y3 1602 aa27.41■■□□□ 1.98
SCN5A-201ENST00000327956 ARHGEF5Q12774 1597 aa27.4■■□□□ 1.98
SCN5A-201ENST00000327956 KIF3BO15066 747 aa27.4■■□□□ 1.98
SCN5A-201ENST00000327956 MYO3AQ8NEV4 1616 aa27.4■■□□□ 1.98
SCN5A-201ENST00000327956 APLP2Q06481 763 aa27.39■■□□□ 1.98
SCN5A-201ENST00000327956 MAP3K1Q13233 1512 aa27.38■■□□□ 1.97
SCN5A-201ENST00000327956 PTPRKQ15262 1439 aa27.38■■□□□ 1.97
SCN5A-201ENST00000327956 FAM135AQ9P2D6 1515 aa27.37■■□□□ 1.97
SCN5A-201ENST00000327956 ZNF142P52746 1687 aaPredicted RBP27.37■■□□□ 1.97
SCN5A-201ENST00000327956 CEP170BQ9Y4F5 1589 aaPredicted RBP27.35■■□□□ 1.97
SCN5A-201ENST00000327956 KDM5DQ9BY66 1539 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms