RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 TCOF1Q13428 1488 aaKnown RBP7.9□□□□□ -1.14
LRIT3-201ENST00000327908 MAGI2Q86UL8 1455 aa7.9□□□□□ -1.14
LRIT3-201ENST00000327908 FAM69CQ0P6D2 419 aa7.89□□□□□ -1.15
LRIT3-201ENST00000327908 SHANK2Q9UPX8 1470 aa7.89□□□□□ -1.15
LRIT3-201ENST00000327908 KIF13AQ9H1H9 1805 aa7.89□□□□□ -1.15
LRIT3-201ENST00000327908 FANCAO15360 1455 aa7.89□□□□□ -1.15
LRIT3-201ENST00000327908 GPATCH8Q9UKJ3 1502 aaKnown RBP7.88□□□□□ -1.15
LRIT3-201ENST00000327908 TTC37Q6PGP7 1564 aa7.88□□□□□ -1.15
LRIT3-201ENST00000327908 CFDP1Q9UEE9 299 aaPredicted RBP7.88□□□□□ -1.15
LRIT3-201ENST00000327908 CDC42BPAQ5VT25 1732 aa7.88□□□□□ -1.15
LRIT3-201ENST00000327908 FGD6Q6ZV73 1430 aa7.88□□□□□ -1.15
LRIT3-201ENST00000327908 DENND4BO75064 1496 aaPredicted RBP7.87□□□□□ -1.15
LRIT3-201ENST00000327908 RTEL1-TNFRSF6BF6WH68 1400 aa7.87□□□□□ -1.15
LRIT3-201ENST00000327908 MAST1Q9Y2H9 1570 aa7.87□□□□□ -1.15
LRIT3-201ENST00000327908 ZNF518AQ6AHZ1 1483 aa7.87□□□□□ -1.15
LRIT3-201ENST00000327908 ABCC1P33527 1531 aa7.87□□□□□ -1.15
LRIT3-201ENST00000327908 FAM135AQ9P2D6 1515 aa7.87□□□□□ -1.15
LRIT3-201ENST00000327908 AKNAQ7Z591 1439 aa7.87□□□□□ -1.15
LRIT3-201ENST00000327908 RRBP1Q9P2E9 1410 aaKnown RBP7.87□□□□□ -1.15
LRIT3-201ENST00000327908 ZMYM4Q5VZL5 1548 aa7.86□□□□□ -1.15
LRIT3-201ENST00000327908 PTPN23Q9H3S7 1636 aa7.86□□□□□ -1.15
LRIT3-201ENST00000327908 KCNH8Q96L42 1107 aa7.86□□□□□ -1.15
LRIT3-201ENST00000327908 CCDC141Q6ZP82 1450 aa7.86□□□□□ -1.15
LRIT3-201ENST00000327908 ADGRL1O94910 1474 aa7.85□□□□□ -1.15
LRIT3-201ENST00000327908 TRHP20396 242 aaPredicted RBP7.85□□□□□ -1.15
LRIT3-201ENST00000327908 CAMSAP2Q08AD1 1489 aa7.84□□□□□ -1.15
LRIT3-201ENST00000327908 CDC42BPBQ9Y5S2 1711 aa7.84□□□□□ -1.15
LRIT3-201ENST00000327908 POGZQ7Z3K3 1410 aa7.84□□□□□ -1.16
LRIT3-201ENST00000327908 REREQ9P2R6 1566 aa7.83□□□□□ -1.16
LRIT3-201ENST00000327908 DNMT1P26358 1616 aaKnown RBP7.83□□□□□ -1.16
LRIT3-201ENST00000327908 ROCK1Q13464 1354 aa7.83□□□□□ -1.16
LRIT3-201ENST00000327908 TSPY4P0CV99 314 aa7.83□□□□□ -1.16
LRIT3-201ENST00000327908 TSPY10P0CW01 314 aa7.83□□□□□ -1.16
LRIT3-201ENST00000327908 KDM6BO15054 1643 aa7.83□□□□□ -1.16
LRIT3-201ENST00000327908 MLH3Q9UHC1 1453 aa7.83□□□□□ -1.16
LRIT3-201ENST00000327908 KDM5CP41229 1560 aa7.83□□□□□ -1.16
LRIT3-201ENST00000327908 PPRC1Q5VV67 1664 aaKnown RBP7.82□□□□□ -1.16
LRIT3-201ENST00000327908 ADGBQ8N7X0 1667 aa7.82□□□□□ -1.16
LRIT3-201ENST00000327908 PLXNC1O60486 1568 aa7.82□□□□□ -1.16
LRIT3-201ENST00000327908 SAMD9LQ8IVG5 1584 aa7.82□□□□□ -1.16
LRIT3-201ENST00000327908 HECW2Q9P2P5 1572 aa7.82□□□□□ -1.16
LRIT3-201ENST00000327908 ADGRL2O95490 1459 aa7.82□□□□□ -1.16
LRIT3-201ENST00000327908 ANKRD30AQ9BXX3 1397 aa7.81□□□□□ -1.16
LRIT3-201ENST00000327908 CROCC2H7BZ55 1655 aa7.81□□□□□ -1.16
LRIT3-201ENST00000327908 ARID3CA6NKF2 412 aa7.81□□□□□ -1.16
LRIT3-201ENST00000327908 SCAPERQ9BY12 1400 aa7.81□□□□□ -1.16
LRIT3-201ENST00000327908 PPP6R1Q9UPN7 881 aa7.81□□□□□ -1.16
LRIT3-201ENST00000327908 KANK4Q5T7N3 995 aaPredicted RBP7.8□□□□□ -1.16
LRIT3-201ENST00000327908 ZFYVE16Q7Z3T8 1539 aa7.8□□□□□ -1.16
LRIT3-201ENST00000327908 ARHGEF40Q8TER5 1519 aa7.8□□□□□ -1.16
LRIT3-201ENST00000327908 EIF2AK4Q9P2K8 1649 aaKnown RBP7.79□□□□□ -1.16
LRIT3-201ENST00000327908 SYCP2Q9BX26 1530 aa7.79□□□□□ -1.16
LRIT3-201ENST00000327908 SPAG9O60271 1321 aaKnown RBP7.79□□□□□ -1.16
LRIT3-201ENST00000327908 DAPK1P53355 1430 aa7.79□□□□□ -1.16
LRIT3-201ENST00000327908 INO80Q9ULG1 1556 aaPredicted RBP7.79□□□□□ -1.16
LRIT3-201ENST00000327908 RICTORQ6R327 1708 aa7.79□□□□□ -1.16
LRIT3-201ENST00000327908 DUOX2Q9NRD8 1548 aa7.79□□□□□ -1.16
LRIT3-201ENST00000327908 AGLP35573 1532 aa7.78□□□□□ -1.16
LRIT3-201ENST00000327908 ATP7AQ04656 1500 aa7.78□□□□□ -1.16
LRIT3-201ENST00000327908 C9orf84Q5VXU9 1444 aa7.78□□□□□ -1.16
LRIT3-201ENST00000327908 HRCP23327 699 aa7.78□□□□□ -1.16
LRIT3-201ENST00000327908 MBD5Q9P267 1494 aa7.78□□□□□ -1.16
LRIT3-201ENST00000327908 ERBINQ96RT1 1412 aa7.78□□□□□ -1.16
LRIT3-201ENST00000327908 BCORL1Q5H9F3 1711 aa7.77□□□□□ -1.17
LRIT3-201ENST00000327908 TSPOAP1O95153 1857 aa7.77□□□□□ -1.17
LRIT3-201ENST00000327908 ATP10AO60312 1499 aa7.77□□□□□ -1.17
LRIT3-201ENST00000327908 TRIM26Q12899 539 aaPredicted RBP7.76□□□□□ -1.17
LRIT3-201ENST00000327908 FAM50AQ14320 339 aaKnown RBP7.75□□□□□ -1.17
LRIT3-201ENST00000327908 ZNF777Q9ULD5 760 aaPredicted RBP7.75□□□□□ -1.17
LRIT3-201ENST00000327908 ABCC5O15440 1437 aa7.75□□□□□ -1.17
LRIT3-201ENST00000327908 CNTLNQ9NXG0 1405 aa7.75□□□□□ -1.17
LRIT3-201ENST00000327908 GCC2Q8IWJ2 1684 aa7.75□□□□□ -1.17
LRIT3-201ENST00000327908 KANK1Q14678 1352 aa7.75□□□□□ -1.17
LRIT3-201ENST00000327908 FRMPD1Q5SYB0 1578 aa7.74□□□□□ -1.17
LRIT3-201ENST00000327908 A2MP01023 1474 aa7.73□□□□□ -1.17
LRIT3-201ENST00000327908 DHX29Q7Z478 1369 aaKnown RBP7.73□□□□□ -1.17
LRIT3-201ENST00000327908 ZC3H13Q5T200 1668 aaKnown RBP7.73□□□□□ -1.17
LRIT3-201ENST00000327908 HFM1A2PYH4 1435 aa7.73□□□□□ -1.17
LRIT3-201ENST00000327908 MYT1LQ9UL68 1186 aa7.72□□□□□ -1.17
LRIT3-201ENST00000327908 TRAPPC8Q9Y2L5 1435 aa7.72□□□□□ -1.17
LRIT3-201ENST00000327908 DIP2CQ9Y2E4 1556 aa7.72□□□□□ -1.17
LRIT3-201ENST00000327908 KIF15Q9NS87 1388 aa7.72□□□□□ -1.17
LRIT3-201ENST00000327908 RNF17Q9BXT8 1623 aaKnown RBP7.71□□□□□ -1.17
LRIT3-201ENST00000327908 KIDINS220Q9ULH0 1771 aa7.71□□□□□ -1.18
LRIT3-201ENST00000327908 NCOA1Q15788 1441 aa7.71□□□□□ -1.18
LRIT3-201ENST00000327908 KDM5DQ9BY66 1539 aa7.71□□□□□ -1.18
LRIT3-201ENST00000327908 ARHGEF12Q9NZN5 1544 aa7.71□□□□□ -1.18
LRIT3-201ENST00000327908 HNRNPMP52272 730 aaKnown RBP eCLIP7.7□□□□□ -1.18
LRIT3-201ENST00000327908 ABCA6Q8N139 1617 aa7.69□□□□□ -1.18
LRIT3-201ENST00000327908 SETD5Q9C0A6 1442 aa7.69□□□□□ -1.18
LRIT3-201ENST00000327908 ANKRD50Q9ULJ7 1429 aa7.69□□□□□ -1.18
LRIT3-201ENST00000327908 UNC13BO14795 1591 aa7.69□□□□□ -1.18
LRIT3-201ENST00000327908 ESF1Q9H501 851 aaKnown RBP7.69□□□□□ -1.18
LRIT3-201ENST00000327908 MROH2AA6NES4 1674 aa7.68□□□□□ -1.18
LRIT3-201ENST00000327908 LMTK2Q8IWU2 1503 aa7.68□□□□□ -1.18
LRIT3-201ENST00000327908 DEPDC5O75140 1603 aa7.67□□□□□ -1.18
LRIT3-201ENST00000327908 PRDM15P57071 1507 aaPredicted RBP7.67□□□□□ -1.18
LRIT3-201ENST00000327908 RPRD2Q5VT52 1461 aaKnown RBP7.67□□□□□ -1.18
LRIT3-201ENST00000327908 ZNF644Q9H582 1327 aaPredicted RBP7.66□□□□□ -1.18
LRIT3-201ENST00000327908 AFAP1Q8N556 730 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms