RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 IRX6P78412 446 aaPredicted RBP16.92■□□□□ 0.3
TRAK1-201ENST00000327628 NOP58Q9Y2X3 529 aaKnown RBP16.91■□□□□ 0.3
TRAK1-201ENST00000327628 SUPT16HQ9Y5B9 1047 aaKnown RBP16.91■□□□□ 0.3
TRAK1-201ENST00000327628 MYO15BQ96JP2 1530 aa16.91■□□□□ 0.3
TRAK1-201ENST00000327628 SRPK2P78362 688 aaKnown RBP16.91■□□□□ 0.3
TRAK1-201ENST00000327628 FRAT1Q92837 279 aaPredicted RBP16.91■□□□□ 0.3
TRAK1-201ENST00000327628 DCAF11Q8TEB1 546 aa16.91■□□□□ 0.3
TRAK1-201ENST00000327628 CCDC34Q96HJ3 373 aa16.9■□□□□ 0.3
TRAK1-201ENST00000327628 LMOD2Q6P5Q4 547 aa16.89■□□□□ 0.29
TRAK1-201ENST00000327628 LMOD3Q0VAK6 560 aa16.89■□□□□ 0.29
TRAK1-201ENST00000327628 HIRIP3Q9BW71 556 aaPredicted RBP16.89■□□□□ 0.29
TRAK1-201ENST00000327628 CHMP4CQ96CF2 233 aa16.87■□□□□ 0.29
TRAK1-201ENST00000327628 NEUROD2Q15784 382 aa16.87■□□□□ 0.29
TRAK1-201ENST00000327628 RWDD1Q9H446 243 aaPredicted RBP16.87■□□□□ 0.29
TRAK1-201ENST00000327628 KIAA1211Q6ZU35 1233 aa16.86■□□□□ 0.29
TRAK1-201ENST00000327628 UACAQ9BZF9 1416 aa16.86■□□□□ 0.29
TRAK1-201ENST00000327628 CCDC18Q5T9S5 1454 aa16.86■□□□□ 0.29
TRAK1-201ENST00000327628 CC2D1BQ5T0F9 858 aaKnown RBP16.86■□□□□ 0.29
TRAK1-201ENST00000327628 GPATCH3Q96I76 525 aa16.85■□□□□ 0.29
TRAK1-201ENST00000327628 SPAG9O60271 1321 aaKnown RBP16.85■□□□□ 0.29
TRAK1-201ENST00000327628 PMFBP1Q8TBY8 1022 aa16.85■□□□□ 0.29
TRAK1-201ENST00000327628 SYAP1Q96A49 352 aaPredicted RBP16.85■□□□□ 0.29
TRAK1-201ENST00000327628 GBP4Q96PP9 640 aa16.85■□□□□ 0.29
TRAK1-201ENST00000327628 CSPP1Q1MSJ5 1256 aa16.84■□□□□ 0.29
TRAK1-201ENST00000327628 PDE3BQ13370 1112 aa16.83■□□□□ 0.29
TRAK1-201ENST00000327628 TMX4Q9H1E5 349 aaPredicted RBP16.83■□□□□ 0.29
TRAK1-201ENST00000327628 TERF2IPQ9NYB0 399 aa16.83■□□□□ 0.29
TRAK1-201ENST00000327628 ABCC8Q09428 1581 aa16.83■□□□□ 0.28
TRAK1-201ENST00000327628 USP35Q9P2H5 1018 aa16.83■□□□□ 0.28
TRAK1-201ENST00000327628 RGS3P49796 1198 aa16.83■□□□□ 0.28
TRAK1-201ENST00000327628 SOGA1O94964 1423 aa16.82■□□□□ 0.28
TRAK1-201ENST00000327628 HMMRO75330 724 aa16.82■□□□□ 0.28
TRAK1-201ENST00000327628 KIAA2012Q0VF49 1180 aa16.82■□□□□ 0.28
TRAK1-201ENST00000327628 TPM4P67936 248 aa16.81■□□□□ 0.28
TRAK1-201ENST00000327628 MSNP26038 577 aaKnown RBP16.8■□□□□ 0.28
TRAK1-201ENST00000327628 TCERG1O14776 1098 aaKnown RBP16.79■□□□□ 0.28
TRAK1-201ENST00000327628 TOP2AP11388 1531 aaKnown RBP16.79■□□□□ 0.28
TRAK1-201ENST00000327628 PKD2Q13563 968 aa16.79■□□□□ 0.28
TRAK1-201ENST00000327628 GNL2Q13823 731 aaKnown RBP16.79■□□□□ 0.28
TRAK1-201ENST00000327628 STK31Q9BXU1 1019 aa16.78■□□□□ 0.28
TRAK1-201ENST00000327628 SIN3AQ96ST3 1273 aa16.78■□□□□ 0.28
TRAK1-201ENST00000327628 EID1Q9Y6B2 187 aa16.77■□□□□ 0.28
TRAK1-201ENST00000327628 RAPGEF2Q9Y4G8 1499 aa16.76■□□□□ 0.27
TRAK1-201ENST00000327628 NAP1L2Q9ULW6 460 aaPredicted RBP16.76■□□□□ 0.27
TRAK1-201ENST00000327628 HSPA5P11021 654 aaKnown RBP16.76■□□□□ 0.27
TRAK1-201ENST00000327628 PLEKHG5O94827 1062 aa16.76■□□□□ 0.27
TRAK1-201ENST00000327628 KIF3AQ9Y496 699 aa16.76■□□□□ 0.27
TRAK1-201ENST00000327628 NUP155O75694 1391 aa16.75■□□□□ 0.27
TRAK1-201ENST00000327628 CCDC88BA6NC98 1476 aa16.75■□□□□ 0.27
TRAK1-201ENST00000327628 NAP1L5Q96NT1 182 aaPredicted RBP16.75■□□□□ 0.27
TRAK1-201ENST00000327628 NGEFQ8N5V2 710 aa16.74■□□□□ 0.27
TRAK1-201ENST00000327628 PLCB2Q00722 1185 aa16.73■□□□□ 0.27
TRAK1-201ENST00000327628 MPHOSPH9Q99550 1183 aa16.71■□□□□ 0.27
TRAK1-201ENST00000327628 STAC3Q96MF2 364 aa16.7■□□□□ 0.26
TRAK1-201ENST00000327628 RCAN3Q9UKA8 241 aa16.7■□□□□ 0.26
TRAK1-201ENST00000327628 CECR2Q9BXF3 1484 aa16.69■□□□□ 0.26
TRAK1-201ENST00000327628 GGT6Q6P531 493 aa16.69■□□□□ 0.26
TRAK1-201ENST00000327628 DRC7Q8IY82 874 aa16.69■□□□□ 0.26
TRAK1-201ENST00000327628 CSB-PGBD3P0DP91 1061 aa16.68■□□□□ 0.26
TRAK1-201ENST00000327628 U2AF1L5P0DN76 240 aaPredicted RBP16.68■□□□□ 0.26
TRAK1-201ENST00000327628 U2AF1Q01081 240 aaKnown RBP eCLIP16.68■□□□□ 0.26
TRAK1-201ENST00000327628 TRHP20396 242 aaPredicted RBP16.68■□□□□ 0.26
TRAK1-201ENST00000327628 NLRP13Q86W25 1043 aa16.68■□□□□ 0.26
TRAK1-201ENST00000327628 CADPSQ9ULU8 1353 aa16.67■□□□□ 0.26
TRAK1-201ENST00000327628 PHF14O94880 888 aa16.67■□□□□ 0.26
TRAK1-201ENST00000327628 KIF15Q9NS87 1388 aa16.66■□□□□ 0.26
TRAK1-201ENST00000327628 RAB3GAP2Q9H2M9 1393 aa16.65■□□□□ 0.26
TRAK1-201ENST00000327628 LRRFIP1Q32MZ4 808 aaKnown RBP16.65■□□□□ 0.26
TRAK1-201ENST00000327628 ITPRIPQ8IWB1 547 aa16.63■□□□□ 0.25
TRAK1-201ENST00000327628 GORABQ5T7V8 394 aa16.63■□□□□ 0.25
TRAK1-201ENST00000327628 SENP3Q9H4L4 574 aaPredicted RBP16.63■□□□□ 0.25
TRAK1-201ENST00000327628 MLECQ14165 292 aa16.61■□□□□ 0.25
TRAK1-201ENST00000327628 MROH2BQ7Z745 1585 aa16.61■□□□□ 0.25
TRAK1-201ENST00000327628 TAF7LQ5H9L4 462 aa16.61■□□□□ 0.25
TRAK1-201ENST00000327628 ANO8Q9HCE9 1232 aaPredicted RBP16.6■□□□□ 0.25
TRAK1-201ENST00000327628 TULP1O00294 542 aaPredicted RBP16.59■□□□□ 0.25
TRAK1-201ENST00000327628 WWC1Q8IX03 1113 aa16.59■□□□□ 0.25
TRAK1-201ENST00000327628 CENPJQ9HC77 1338 aaPredicted RBP16.59■□□□□ 0.25
TRAK1-201ENST00000327628 B4GALNT3Q6L9W6 998 aa16.59■□□□□ 0.25
TRAK1-201ENST00000327628 CLSTN1O94985 981 aa16.58■□□□□ 0.25
TRAK1-201ENST00000327628 CCDC144AA2RUR9 1427 aa16.58■□□□□ 0.25
TRAK1-201ENST00000327628 ST18O60284 1047 aa16.58■□□□□ 0.24
TRAK1-201ENST00000327628 STK26Q9P289 416 aa16.58■□□□□ 0.24
TRAK1-201ENST00000327628 ISY1Q9ULR0 285 aaKnown RBP16.58■□□□□ 0.24
TRAK1-201ENST00000327628 SMC4Q9NTJ3 1288 aa16.58■□□□□ 0.24
TRAK1-201ENST00000327628 PAK3O75914 559 aaPredicted RBP16.57■□□□□ 0.24
TRAK1-201ENST00000327628 WASHC2CQ9Y4E1 1318 aa16.57■□□□□ 0.24
TRAK1-201ENST00000327628 KIF3BO15066 747 aa16.57■□□□□ 0.24
TRAK1-201ENST00000327628 ATP6V1DQ9Y5K8 247 aa16.57■□□□□ 0.24
TRAK1-201ENST00000327628 MYBBP1AQ9BQG0 1328 aaKnown RBP16.56■□□□□ 0.24
TRAK1-201ENST00000327628 VGFO15240 615 aaPredicted RBP16.56■□□□□ 0.24
TRAK1-201ENST00000327628 AAMPQ13685 434 aa16.56■□□□□ 0.24
TRAK1-201ENST00000327628 ROCK1Q13464 1354 aa16.55■□□□□ 0.24
TRAK1-201ENST00000327628 NGDNQ8NEJ9 315 aaKnown RBP16.54■□□□□ 0.24
TRAK1-201ENST00000327628 TPRNQ4KMQ1 711 aa16.54■□□□□ 0.24
TRAK1-201ENST00000327628 AMPHP49418 695 aa16.53■□□□□ 0.24
TRAK1-201ENST00000327628 EVC2Q86UK5 1308 aa16.53■□□□□ 0.24
TRAK1-201ENST00000327628 KIF16BQ96L93 1317 aa16.53■□□□□ 0.24
TRAK1-201ENST00000327628 DDX11L8A8MPP1 907 aa16.53■□□□□ 0.24
TRAK1-201ENST00000327628 CGNL1Q0VF96 1302 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms