RNA–Protein interactions for RNA: ENST00000326674.9

PTPMT1-202, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPMT1, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-202ENST00000326674 SCAPERQ9BY12 1400 aa32.1■■■□□ 2.73
PTPMT1-202ENST00000326674 PREX2Q70Z35 1606 aa32.09■■■□□ 2.73
PTPMT1-202ENST00000326674 ZMYM4Q5VZL5 1548 aa32.08■■■□□ 2.73
PTPMT1-202ENST00000326674 LOC105371045A0A1W2PR82 267 aa32.06■■■□□ 2.72
PTPMT1-202ENST00000326674 POGZQ7Z3K3 1410 aa32.05■■■□□ 2.72
PTPMT1-202ENST00000326674 CDC42BPAQ5VT25 1732 aa32.05■■■□□ 2.72
PTPMT1-202ENST00000326674 ZFYVE16Q7Z3T8 1539 aa32.04■■■□□ 2.72
PTPMT1-202ENST00000326674 ARID4BQ4LE39 1312 aaPredicted RBP32.03■■■□□ 2.72
PTPMT1-202ENST00000326674 MTUS2Q5JR59 1369 aa31.98■■■□□ 2.71
PTPMT1-202ENST00000326674 BCORL1Q5H9F3 1711 aa31.97■■■□□ 2.71
PTPMT1-202ENST00000326674 MAGI2Q86UL8 1455 aa31.97■■■□□ 2.71
PTPMT1-202ENST00000326674 YEATS2Q9ULM3 1422 aa31.95■■■□□ 2.71
PTPMT1-202ENST00000326674 ZNF518AQ6AHZ1 1483 aa31.95■■■□□ 2.7
PTPMT1-202ENST00000326674 ADAMTSL3P82987 1691 aa31.94■■■□□ 2.7
PTPMT1-202ENST00000326674 ITSN2Q9NZM3 1697 aa31.93■■■□□ 2.7
PTPMT1-202ENST00000326674 EHBP1L1Q8N3D4 1523 aa31.91■■■□□ 2.7
PTPMT1-202ENST00000326674 MYT1LQ9UL68 1186 aa31.91■■■□□ 2.7
PTPMT1-202ENST00000326674 ABCC1P33527 1531 aa31.9■■■□□ 2.7
PTPMT1-202ENST00000326674 KDM5CP41229 1560 aa31.88■■■□□ 2.69
PTPMT1-202ENST00000326674 HECW2Q9P2P5 1572 aa31.88■■■□□ 2.69
PTPMT1-202ENST00000326674 MADDQ8WXG6 1647 aa31.87■■■□□ 2.69
PTPMT1-202ENST00000326674 ZNF777Q9ULD5 760 aaPredicted RBP31.87■■■□□ 2.69
PTPMT1-202ENST00000326674 CCNB3Q8WWL7 1395 aa31.86■■■□□ 2.69
PTPMT1-202ENST00000326674 SIGLEC1Q9BZZ2 1709 aa31.86■■■□□ 2.69
PTPMT1-202ENST00000326674 GPATCH8Q9UKJ3 1502 aaKnown RBP31.85■■■□□ 2.69
PTPMT1-202ENST00000326674 AFAP1Q8N556 730 aa31.84■■■□□ 2.69
PTPMT1-202ENST00000326674 VPS8Q8N3P4 1428 aa31.83■■■□□ 2.69
PTPMT1-202ENST00000326674 SAMD9LQ8IVG5 1584 aa31.83■■■□□ 2.69
PTPMT1-202ENST00000326674 RIMS1Q86UR5 1692 aaKnown RBP31.83■■■□□ 2.69
PTPMT1-202ENST00000326674 ATP10AO60312 1499 aa31.81■■■□□ 2.68
PTPMT1-202ENST00000326674 C9orf84Q5VXU9 1444 aa31.81■■■□□ 2.68
PTPMT1-202ENST00000326674 ARHGEF12Q9NZN5 1544 aa31.8■■■□□ 2.68
PTPMT1-202ENST00000326674 PTPRMP28827 1452 aa31.79■■■□□ 2.68
PTPMT1-202ENST00000326674 TIAM1Q13009 1591 aa31.79■■■□□ 2.68
PTPMT1-202ENST00000326674 TRAPPC8Q9Y2L5 1435 aa31.79■■■□□ 2.68
PTPMT1-202ENST00000326674 SUPT6HQ7KZ85 1726 aaKnown RBP31.78■■■□□ 2.68
PTPMT1-202ENST00000326674 CFDP1Q9UEE9 299 aaPredicted RBP31.78■■■□□ 2.68
PTPMT1-202ENST00000326674 SYCP2Q9BX26 1530 aa31.78■■■□□ 2.68
PTPMT1-202ENST00000326674 DIP2CQ9Y2E4 1556 aa31.76■■■□□ 2.67
PTPMT1-202ENST00000326674 FER1L4A9Z1Z3 1794 aa31.76■■■□□ 2.67
PTPMT1-202ENST00000326674 ABCA6Q8N139 1617 aa31.75■■■□□ 2.67
PTPMT1-202ENST00000326674 MLECQ14165 292 aa31.75■■■□□ 2.67
PTPMT1-202ENST00000326674 MLH3Q9UHC1 1453 aa31.73■■■□□ 2.67
PTPMT1-202ENST00000326674 PLEKHH2Q8IVE3 1493 aa31.72■■■□□ 2.67
PTPMT1-202ENST00000326674 KIDINS220Q9ULH0 1771 aa31.7■■■□□ 2.67
PTPMT1-202ENST00000326674 HNRNPMP52272 730 aaKnown RBP eCLIP31.67■■■□□ 2.66
PTPMT1-202ENST00000326674 NCOA2Q15596 1464 aa31.66■■■□□ 2.66
PTPMT1-202ENST00000326674 REREQ9P2R6 1566 aa31.65■■■□□ 2.66
PTPMT1-202ENST00000326674 PLPPR3Q6T4P5 718 aa31.64■■■□□ 2.66
PTPMT1-202ENST00000326674 KIAA1107Q9UPP5 1409 aa31.64■■■□□ 2.66
PTPMT1-202ENST00000326674 LRRC9Q6ZRR7 1453 aa31.61■■■□□ 2.65
PTPMT1-202ENST00000326674 SPAG9O60271 1321 aaKnown RBP31.61■■■□□ 2.65
PTPMT1-202ENST00000326674 ATP7AQ04656 1500 aa31.59■■■□□ 2.65
PTPMT1-202ENST00000326674 MAP3K1Q13233 1512 aa31.58■■■□□ 2.65
PTPMT1-202ENST00000326674 INO80Q9ULG1 1556 aaPredicted RBP31.57■■■□□ 2.64
PTPMT1-202ENST00000326674 ZNF644Q9H582 1327 aaPredicted RBP31.56■■■□□ 2.64
PTPMT1-202ENST00000326674 APLP2Q06481 763 aa31.54■■■□□ 2.64
PTPMT1-202ENST00000326674 AGLP35573 1532 aa31.53■■■□□ 2.64
PTPMT1-202ENST00000326674 CAMSAP2Q08AD1 1489 aa31.52■■■□□ 2.64
PTPMT1-202ENST00000326674 ADGBQ8N7X0 1667 aa31.48■■■□□ 2.63
PTPMT1-202ENST00000326674 KANK4Q5T7N3 995 aaPredicted RBP31.48■■■□□ 2.63
PTPMT1-202ENST00000326674 ESF1Q9H501 851 aaKnown RBP31.47■■■□□ 2.63
PTPMT1-202ENST00000326674 MBD5Q9P267 1494 aa31.46■■■□□ 2.63
PTPMT1-202ENST00000326674 CCDC141Q6ZP82 1450 aa31.44■■■□□ 2.62
PTPMT1-202ENST00000326674 A2MP01023 1474 aa31.43■■■□□ 2.62
PTPMT1-202ENST00000326674 LMTK3Q96Q04 1460 aa31.41■■■□□ 2.62
PTPMT1-202ENST00000326674 PLXNC1O60486 1568 aa31.39■■■□□ 2.62
PTPMT1-202ENST00000326674 C3P01024 1663 aa31.38■■■□□ 2.61
PTPMT1-202ENST00000326674 PREX1Q8TCU6 1659 aa31.38■■■□□ 2.61
PTPMT1-202ENST00000326674 CEBPAP49715 358 aaPredicted RBP31.37■■■□□ 2.61
PTPMT1-202ENST00000326674 RTEL1-TNFRSF6BF6WH68 1400 aa31.37■■■□□ 2.61
PTPMT1-202ENST00000326674 MYOM3Q5VTT5 1437 aa31.37■■■□□ 2.61
PTPMT1-202ENST00000326674 ARHGEF5Q12774 1597 aa31.37■■■□□ 2.61
PTPMT1-202ENST00000326674 RSPH4AQ5TD94 716 aa31.35■■■□□ 2.61
PTPMT1-202ENST00000326674 CNTLNQ9NXG0 1405 aa31.32■■■□□ 2.61
PTPMT1-202ENST00000326674 MROH2AA6NES4 1674 aa31.31■■■□□ 2.6
PTPMT1-202ENST00000326674 MIA2Q96PC5 1412 aa31.31■■■□□ 2.6
PTPMT1-202ENST00000326674 CLTCQ00610 1675 aaKnown RBP31.3■■■□□ 2.6
PTPMT1-202ENST00000326674 TSPY4P0CV99 314 aa31.29■■■□□ 2.6
PTPMT1-202ENST00000326674 TSPY10P0CW01 314 aa31.29■■■□□ 2.6
PTPMT1-202ENST00000326674 SETD1BQ9UPS6 1966 aaKnown RBP31.27■■■□□ 2.6
PTPMT1-202ENST00000326674 GGT6Q6P531 493 aa31.27■■■□□ 2.6
PTPMT1-202ENST00000326674 HSPA2P54652 639 aa31.26■■■□□ 2.59
PTPMT1-202ENST00000326674 PTPN23Q9H3S7 1636 aa31.24■■■□□ 2.59
PTPMT1-202ENST00000326674 DHX29Q7Z478 1369 aaKnown RBP31.23■■■□□ 2.59
PTPMT1-202ENST00000326674 UHRF1BP1Q6BDS2 1440 aa31.22■■■□□ 2.59
PTPMT1-202ENST00000326674 MAST1Q9Y2H9 1570 aa31.22■■■□□ 2.59
PTPMT1-202ENST00000326674 CROCC2H7BZ55 1655 aa31.17■■■□□ 2.58
PTPMT1-202ENST00000326674 KIF3BO15066 747 aa31.16■■■□□ 2.58
PTPMT1-202ENST00000326674 ZMYM3Q14202 1370 aa31.15■■■□□ 2.58
PTPMT1-202ENST00000326674 FGD6Q6ZV73 1430 aa31.13■■■□□ 2.57
PTPMT1-202ENST00000326674 PPP6R1Q9UPN7 881 aa31.11■■■□□ 2.57
PTPMT1-202ENST00000326674 NPATQ14207 1427 aa31.09■■■□□ 2.57
PTPMT1-202ENST00000326674 DNMT1P26358 1616 aaKnown RBP31.08■■■□□ 2.57
PTPMT1-202ENST00000326674 KDM5DQ9BY66 1539 aa31.07■■■□□ 2.56
PTPMT1-202ENST00000326674 TCOF1Q13428 1488 aaKnown RBP31.07■■■□□ 2.56
PTPMT1-202ENST00000326674 EIF2AK4Q9P2K8 1649 aaKnown RBP31.06■■■□□ 2.56
PTPMT1-202ENST00000326674 SHANK2Q9UPX8 1470 aa31.05■■■□□ 2.56
PTPMT1-202ENST00000326674 FAM135AQ9P2D6 1515 aa31.04■■■□□ 2.56
PTPMT1-202ENST00000326674 MYO3AQ8NEV4 1616 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms