RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 KIF14Q15058 1648 aa28.86■■■□□ 2.21
PTPMT1-201ENST00000326656 CASKIN1Q8WXD9 1431 aa28.86■■■□□ 2.21
PTPMT1-201ENST00000326656 POGZQ7Z3K3 1410 aa28.83■■■□□ 2.21
PTPMT1-201ENST00000326656 ZFYVE16Q7Z3T8 1539 aa28.83■■■□□ 2.21
PTPMT1-201ENST00000326656 CCDC18Q5T9S5 1454 aa28.82■■■□□ 2.2
PTPMT1-201ENST00000326656 LRRIQ1Q96JM4 1722 aa28.82■■■□□ 2.2
PTPMT1-201ENST00000326656 MADDQ8WXG6 1647 aa28.77■■■□□ 2.2
PTPMT1-201ENST00000326656 YEATS2Q9ULM3 1422 aa28.77■■■□□ 2.2
PTPMT1-201ENST00000326656 PCF11O94913 1555 aaKnown RBP28.75■■■□□ 2.19
PTPMT1-201ENST00000326656 ARHGAP5Q13017 1502 aa28.74■■■□□ 2.19
PTPMT1-201ENST00000326656 FYCO1Q9BQS8 1478 aa28.73■■■□□ 2.19
PTPMT1-201ENST00000326656 ATP10AO60312 1499 aa28.72■■■□□ 2.19
PTPMT1-201ENST00000326656 ZNF518AQ6AHZ1 1483 aa28.72■■■□□ 2.19
PTPMT1-201ENST00000326656 CDC42BPBQ9Y5S2 1711 aa28.67■■■□□ 2.18
PTPMT1-201ENST00000326656 RIMS1Q86UR5 1692 aaKnown RBP28.66■■■□□ 2.18
PTPMT1-201ENST00000326656 AFAP1Q8N556 730 aa28.65■■■□□ 2.18
PTPMT1-201ENST00000326656 C9orf84Q5VXU9 1444 aa28.65■■■□□ 2.18
PTPMT1-201ENST00000326656 KDM5CP41229 1560 aa28.65■■■□□ 2.18
PTPMT1-201ENST00000326656 SIGLEC1Q9BZZ2 1709 aa28.64■■■□□ 2.18
PTPMT1-201ENST00000326656 PREX2Q70Z35 1606 aa28.64■■■□□ 2.18
PTPMT1-201ENST00000326656 MLH3Q9UHC1 1453 aa28.59■■■□□ 2.17
PTPMT1-201ENST00000326656 MLECQ14165 292 aa28.57■■■□□ 2.16
PTPMT1-201ENST00000326656 CDC42BPAQ5VT25 1732 aa28.56■■■□□ 2.16
PTPMT1-201ENST00000326656 LMTK3Q96Q04 1460 aa28.56■■■□□ 2.16
PTPMT1-201ENST00000326656 ARHGEF12Q9NZN5 1544 aa28.56■■■□□ 2.16
PTPMT1-201ENST00000326656 FER1L4A9Z1Z3 1794 aa28.55■■■□□ 2.16
PTPMT1-201ENST00000326656 ABCC1P33527 1531 aa28.55■■■□□ 2.16
PTPMT1-201ENST00000326656 MYT1LQ9UL68 1186 aa28.55■■■□□ 2.16
PTPMT1-201ENST00000326656 FBXO41Q8TF61 875 aa28.54■■■□□ 2.16
PTPMT1-201ENST00000326656 REREQ9P2R6 1566 aa28.54■■■□□ 2.16
PTPMT1-201ENST00000326656 ITSN2Q9NZM3 1697 aa28.51■■■□□ 2.15
PTPMT1-201ENST00000326656 TRAPPC8Q9Y2L5 1435 aa28.51■■■□□ 2.15
PTPMT1-201ENST00000326656 DIP2CQ9Y2E4 1556 aa28.5■■■□□ 2.15
PTPMT1-201ENST00000326656 GPATCH8Q9UKJ3 1502 aaKnown RBP28.49■■■□□ 2.15
PTPMT1-201ENST00000326656 AGLP35573 1532 aa28.45■■■□□ 2.15
PTPMT1-201ENST00000326656 ABCA6Q8N139 1617 aa28.44■■■□□ 2.14
PTPMT1-201ENST00000326656 MTUS2Q5JR59 1369 aa28.44■■■□□ 2.14
PTPMT1-201ENST00000326656 PLEKHH2Q8IVE3 1493 aa28.43■■■□□ 2.14
PTPMT1-201ENST00000326656 PLPPR3Q6T4P5 718 aa28.43■■■□□ 2.14
PTPMT1-201ENST00000326656 ZNF777Q9ULD5 760 aaPredicted RBP28.43■■■□□ 2.14
PTPMT1-201ENST00000326656 KIAA1107Q9UPP5 1409 aa28.43■■■□□ 2.14
PTPMT1-201ENST00000326656 CCNB3Q8WWL7 1395 aa28.42■■■□□ 2.14
PTPMT1-201ENST00000326656 CFDP1Q9UEE9 299 aaPredicted RBP28.42■■■□□ 2.14
PTPMT1-201ENST00000326656 KIDINS220Q9ULH0 1771 aa28.41■■■□□ 2.14
PTPMT1-201ENST00000326656 CEP162Q5TB80 1403 aa28.41■■■□□ 2.14
PTPMT1-201ENST00000326656 SAMD9LQ8IVG5 1584 aa28.41■■■□□ 2.14
PTPMT1-201ENST00000326656 SETD1BQ9UPS6 1966 aaKnown RBP28.37■■■□□ 2.13
PTPMT1-201ENST00000326656 HSPA2P54652 639 aa28.36■■■□□ 2.13
PTPMT1-201ENST00000326656 SPAG9O60271 1321 aaKnown RBP28.36■■■□□ 2.13
PTPMT1-201ENST00000326656 SYCP2Q9BX26 1530 aa28.35■■■□□ 2.13
PTPMT1-201ENST00000326656 HNRNPMP52272 730 aaKnown RBP eCLIP28.35■■■□□ 2.13
PTPMT1-201ENST00000326656 CEBPAP49715 358 aaPredicted RBP28.34■■■□□ 2.13
PTPMT1-201ENST00000326656 ESF1Q9H501 851 aaKnown RBP28.34■■■□□ 2.13
PTPMT1-201ENST00000326656 PREX1Q8TCU6 1659 aa28.33■■■□□ 2.13
PTPMT1-201ENST00000326656 EHBP1L1Q8N3D4 1523 aa28.33■■■□□ 2.13
PTPMT1-201ENST00000326656 CNTLNQ9NXG0 1405 aa28.29■■■□□ 2.12
PTPMT1-201ENST00000326656 ATP7AQ04656 1500 aa28.27■■■□□ 2.12
PTPMT1-201ENST00000326656 TIAM1Q13009 1591 aa28.25■■■□□ 2.11
PTPMT1-201ENST00000326656 C3P01024 1663 aa28.24■■■□□ 2.11
PTPMT1-201ENST00000326656 UHRF1BP1Q6BDS2 1440 aa28.24■■■□□ 2.11
PTPMT1-201ENST00000326656 INO80Q9ULG1 1556 aaPredicted RBP28.24■■■□□ 2.11
PTPMT1-201ENST00000326656 DMRT2Q9Y5R5 561 aa28.21■■■□□ 2.11
PTPMT1-201ENST00000326656 A2MP01023 1474 aa28.2■■■□□ 2.1
PTPMT1-201ENST00000326656 MBD5Q9P267 1494 aa28.2■■■□□ 2.1
PTPMT1-201ENST00000326656 ZNF644Q9H582 1327 aaPredicted RBP28.19■■■□□ 2.1
PTPMT1-201ENST00000326656 RSPH4AQ5TD94 716 aa28.18■■■□□ 2.1
PTPMT1-201ENST00000326656 PLXNC1O60486 1568 aa28.18■■■□□ 2.1
PTPMT1-201ENST00000326656 RTEL1-TNFRSF6BF6WH68 1400 aa28.18■■■□□ 2.1
PTPMT1-201ENST00000326656 MROH2AA6NES4 1674 aa28.17■■■□□ 2.1
PTPMT1-201ENST00000326656 PPP6R1Q9UPN7 881 aa28.17■■■□□ 2.1
PTPMT1-201ENST00000326656 SUPT6HQ7KZ85 1726 aaKnown RBP28.17■■■□□ 2.1
PTPMT1-201ENST00000326656 LOC105371045A0A1W2PR82 267 aa28.15■■■□□ 2.1
PTPMT1-201ENST00000326656 ADGBQ8N7X0 1667 aa28.15■■■□□ 2.1
PTPMT1-201ENST00000326656 VPS8Q8N3P4 1428 aa28.15■■■□□ 2.1
PTPMT1-201ENST00000326656 NCOA2Q15596 1464 aa28.15■■■□□ 2.1
PTPMT1-201ENST00000326656 NPATQ14207 1427 aa28.14■■■□□ 2.1
PTPMT1-201ENST00000326656 ZMYM3Q14202 1370 aa28.13■■■□□ 2.09
PTPMT1-201ENST00000326656 STRCQ7RTU9 1775 aa28.1■■■□□ 2.09
PTPMT1-201ENST00000326656 MAP3K1Q13233 1512 aa28.08■■■□□ 2.08
PTPMT1-201ENST00000326656 CERKQ8TCT0 537 aa28.07■■■□□ 2.08
PTPMT1-201ENST00000326656 GGT6Q6P531 493 aa28.06■■■□□ 2.08
PTPMT1-201ENST00000326656 DHX29Q7Z478 1369 aaKnown RBP28.06■■■□□ 2.08
PTPMT1-201ENST00000326656 CCDC141Q6ZP82 1450 aa28.06■■■□□ 2.08
PTPMT1-201ENST00000326656 LRRC9Q6ZRR7 1453 aa28.06■■■□□ 2.08
PTPMT1-201ENST00000326656 CAMSAP2Q08AD1 1489 aa28.05■■■□□ 2.08
PTPMT1-201ENST00000326656 CLTCQ00610 1675 aaKnown RBP28.03■■■□□ 2.08
PTPMT1-201ENST00000326656 PTPRTO14522 1441 aa28.02■■■□□ 2.08
PTPMT1-201ENST00000326656 ARHGEF5Q12774 1597 aa28■■■□□ 2.07
PTPMT1-201ENST00000326656 TSPY4P0CV99 314 aa28■■■□□ 2.07
PTPMT1-201ENST00000326656 TSPY10P0CW01 314 aa28■■■□□ 2.07
PTPMT1-201ENST00000326656 PTPRKQ15262 1439 aa27.98■■■□□ 2.07
PTPMT1-201ENST00000326656 NCOA1Q15788 1441 aa27.96■■■□□ 2.07
PTPMT1-201ENST00000326656 FAM135AQ9P2D6 1515 aa27.94■■■□□ 2.06
PTPMT1-201ENST00000326656 KIF3BO15066 747 aa27.94■■■□□ 2.06
PTPMT1-201ENST00000326656 MIA2Q96PC5 1412 aa27.92■■■□□ 2.06
PTPMT1-201ENST00000326656 KANK4Q5T7N3 995 aaPredicted RBP27.92■■■□□ 2.06
PTPMT1-201ENST00000326656 CAMSAP1Q5T5Y3 1602 aa27.89■■■□□ 2.06
PTPMT1-201ENST00000326656 ZNF142P52746 1687 aaPredicted RBP27.89■■■□□ 2.06
PTPMT1-201ENST00000326656 MYOM3Q5VTT5 1437 aa27.88■■■□□ 2.05
PTPMT1-201ENST00000326656 MYO3AQ8NEV4 1616 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms